RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PPIP5K1Q6PFW1 1433 aa21.27■■□□□ 1
LTBP3-210ENST00000528516 DEPDC5O75140 1603 aa21.27■■□□□ 1
LTBP3-210ENST00000528516 WASHC4Q2M389 1173 aa21.26■□□□□ 0.99
LTBP3-210ENST00000528516 CNTROBQ8N137 903 aa21.26■□□□□ 0.99
LTBP3-210ENST00000528516 GIMAP6Q6P9H5 292 aa21.26■□□□□ 0.99
LTBP3-210ENST00000528516 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
LTBP3-210ENST00000528516 MADDQ8WXG6 1647 aa21.26■□□□□ 0.99
LTBP3-210ENST00000528516 VWDEQ8N2E2 1590 aa21.26■□□□□ 0.99
LTBP3-210ENST00000528516 AACSQ86V21 672 aa21.25■□□□□ 0.99
LTBP3-210ENST00000528516 JAKMIP1Q96N16 626 aaKnown RBP21.25■□□□□ 0.99
LTBP3-210ENST00000528516 OGFRQ9NZT2 677 aa21.25■□□□□ 0.99
LTBP3-210ENST00000528516 HDAC5Q9UQL6 1122 aa21.25■□□□□ 0.99
LTBP3-210ENST00000528516 DDX11Q96FC9 970 aa21.25■□□□□ 0.99
LTBP3-210ENST00000528516 PYCARDQ9ULZ3 195 aa21.25■□□□□ 0.99
LTBP3-210ENST00000528516 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
LTBP3-210ENST00000528516 CCT4P50991 539 aaKnown RBP21.24■□□□□ 0.99
LTBP3-210ENST00000528516 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
LTBP3-210ENST00000528516 CCDC112Q8NEF3 446 aa21.24■□□□□ 0.99
LTBP3-210ENST00000528516 VAMP4O75379 141 aa21.24■□□□□ 0.99
LTBP3-210ENST00000528516 MX1P20591 662 aa21.24■□□□□ 0.99
LTBP3-210ENST00000528516 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
LTBP3-210ENST00000528516 CCAR2Q8N163 923 aaKnown RBP21.24■□□□□ 0.99
LTBP3-210ENST00000528516 SIRT2Q8IXJ6 389 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 FEZ1Q99689 392 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 CHMP4AQ9BY43 222 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 WDR33Q9C0J8 1336 aaKnown RBP21.23■□□□□ 0.99
LTBP3-210ENST00000528516 EVA1CP58658 441 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 CAMK4Q16566 473 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 TPD52L1Q16890 204 aaPredicted RBP21.23■□□□□ 0.99
LTBP3-210ENST00000528516 CCDC83Q8IWF9 413 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 BOLA2Q9H3K6 86 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 MCM2P49736 904 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 CNPY2Q9Y2B0 182 aa21.23■□□□□ 0.99
LTBP3-210ENST00000528516 CPLX1O14810 134 aa21.22■□□□□ 0.99
LTBP3-210ENST00000528516 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
LTBP3-210ENST00000528516 HTATSF1O43719 755 aaKnown RBP21.22■□□□□ 0.99
LTBP3-210ENST00000528516 GTF2F1P35269 517 aaKnown RBP eCLIP21.22■□□□□ 0.991e-6■■■■□ 21.6
LTBP3-210ENST00000528516 PDIA4P13667 645 aaKnown RBP21.21■□□□□ 0.99
LTBP3-210ENST00000528516 CASTP20810 708 aaKnown RBP21.21■□□□□ 0.99
LTBP3-210ENST00000528516 BRD1O95696 1058 aa21.21■□□□□ 0.99
LTBP3-210ENST00000528516 TPM3P06753 285 aa21.21■□□□□ 0.99
LTBP3-210ENST00000528516 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
LTBP3-210ENST00000528516 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
LTBP3-210ENST00000528516 FLIIQ13045 1269 aa21.21■□□□□ 0.99
LTBP3-210ENST00000528516 PES1O00541 588 aaKnown RBP21.2■□□□□ 0.98
LTBP3-210ENST00000528516 TNNT1P13805 278 aa21.2■□□□□ 0.98
LTBP3-210ENST00000528516 TMEM51Q9NW97 253 aa21.2■□□□□ 0.98
LTBP3-210ENST00000528516 BTBD11A6QL63 1104 aa21.2■□□□□ 0.98
LTBP3-210ENST00000528516 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
LTBP3-210ENST00000528516 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.2■□□□□ 0.981e-9■■■□□ 18.3
LTBP3-210ENST00000528516 V9GYY5 206 aaPredicted RBP21.2■□□□□ 0.98
LTBP3-210ENST00000528516 ACEP12821 1306 aa21.2■□□□□ 0.98
LTBP3-210ENST00000528516 AMOTL2Q9Y2J4 779 aa21.2■□□□□ 0.98
LTBP3-210ENST00000528516 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.98
LTBP3-210ENST00000528516 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 PTGS1P23219 599 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
LTBP3-210ENST00000528516 TRIM5Q9C035 493 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 G2E3Q7L622 706 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 LAMC1P11047 1609 aa21.19■□□□□ 0.98
LTBP3-210ENST00000528516 ERVK-7P63135 1459 aa21.18■□□□□ 0.98
LTBP3-210ENST00000528516 GNAT3A8MTJ3 354 aa21.18■□□□□ 0.98
LTBP3-210ENST00000528516 A0A1W2PP64 1363 aa21.18■□□□□ 0.98
LTBP3-210ENST00000528516 MYOM2P54296 1465 aa21.18■□□□□ 0.98
LTBP3-210ENST00000528516 LARP1BQ659C4 914 aaKnown RBP21.18■□□□□ 0.98
LTBP3-210ENST00000528516 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
LTBP3-210ENST00000528516 RIMS2Q9UQ26 1411 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 MRPL50Q8N5N7 158 aaKnown RBP21.17■□□□□ 0.98
LTBP3-210ENST00000528516 TIGD1Q96MW7 591 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 TFIP11Q9UBB9 837 aaKnown RBP21.17■□□□□ 0.98
LTBP3-210ENST00000528516 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 RASSF8Q8NHQ8 419 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 KIAA1524Q8TCG1 905 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 TNRQ92752 1358 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 IL16Q14005 1332 aa21.17■□□□□ 0.98
LTBP3-210ENST00000528516 KDM5AP29375 1690 aaKnown RBP21.16■□□□□ 0.98
LTBP3-210ENST00000528516 NAA30Q147X3 362 aaPredicted RBP21.16■□□□□ 0.98
LTBP3-210ENST00000528516 GLI2P10070 1586 aa21.16■□□□□ 0.98
LTBP3-210ENST00000528516 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
LTBP3-210ENST00000528516 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.16■□□□□ 0.98
LTBP3-210ENST00000528516 CAMSAP1Q5T5Y3 1602 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 DCTPP1Q9H773 170 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 EIF4A2Q14240 407 aaKnown RBP21.15■□□□□ 0.98
LTBP3-210ENST00000528516 CCDC186Q7Z3E2 898 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 CCDC192P0DO97 292 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 CPA1P15085 419 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 CYP46A1Q9Y6A2 500 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
LTBP3-210ENST00000528516 GUCY1B3Q02153 619 aa21.14■□□□□ 0.98
LTBP3-210ENST00000528516 SPTLC3Q9NUV7 552 aa21.14■□□□□ 0.98
LTBP3-210ENST00000528516 GABPB1Q06547 395 aaPredicted RBP21.14■□□□□ 0.97
LTBP3-210ENST00000528516 PPP1R42Q7Z4L9 355 aa21.14■□□□□ 0.97
LTBP3-210ENST00000528516 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
LTBP3-210ENST00000528516 ADGRB3O60242 1522 aa21.14■□□□□ 0.97
LTBP3-210ENST00000528516 PLEKHO1Q53GL0 409 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms