RNA–Protein interactions for RNA: ENST00000528248.1

PKD2L1-203, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 1 (best)

Gene PKD2L1, Length 2,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-203ENST00000528248 KIF1BPQ96EK5 621 aa18.39■□□□□ 0.53
PKD2L1-203ENST00000528248 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
PKD2L1-203ENST00000528248 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
PKD2L1-203ENST00000528248 ESPNB1AK53 854 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 PSME1Q06323 249 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 CAVIN1Q6NZI2 390 aaKnown RBP18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 ZSCAN23Q3MJ62 389 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 NUTM1Q86Y26 1132 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 PPP1R9BQ96SB3 815 aa18.38■□□□□ 0.53
PKD2L1-203ENST00000528248 TEFQ10587 303 aa18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 HSP90AB4PQ58FF6 505 aa18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 ANP32BQ92688 251 aaKnown RBP18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 PI4KAP2A4QPH2 592 aa18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 NBPF7P0C2Y1 421 aaPredicted RBP18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 PI4KAP1Q8N8J0 262 aa18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
PKD2L1-203ENST00000528248 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
PKD2L1-203ENST00000528248 BRD1O95696 1058 aa18.36■□□□□ 0.53
PKD2L1-203ENST00000528248 HSPA4P34932 840 aa18.36■□□□□ 0.53
PKD2L1-203ENST00000528248 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
PKD2L1-203ENST00000528248 SETD1BQ9UPS6 1966 aaKnown RBP18.36■□□□□ 0.53
PKD2L1-203ENST00000528248 ESCO1Q5FWF5 840 aa18.35■□□□□ 0.53
PKD2L1-203ENST00000528248 ZNF530Q6P9A1 599 aaPredicted RBP18.35■□□□□ 0.53
PKD2L1-203ENST00000528248 KCNQ3O43525 872 aa18.35■□□□□ 0.53
PKD2L1-203ENST00000528248 GPT2Q8TD30 523 aa18.35■□□□□ 0.53
PKD2L1-203ENST00000528248 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
PKD2L1-203ENST00000528248 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
PKD2L1-203ENST00000528248 DBF4Q9UBU7 674 aaPredicted RBP18.34■□□□□ 0.53
PKD2L1-203ENST00000528248 ADCY9O60503 1353 aa18.33■□□□□ 0.53
PKD2L1-203ENST00000528248 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
PKD2L1-203ENST00000528248 SGSM2O43147 1006 aa18.33■□□□□ 0.53
PKD2L1-203ENST00000528248 IL25Q9H293 177 aa18.33■□□□□ 0.53
PKD2L1-203ENST00000528248 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.52
PKD2L1-203ENST00000528248 OVOS2A0A0G2JMS6 1433 aa18.33■□□□□ 0.52
PKD2L1-203ENST00000528248 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.52
PKD2L1-203ENST00000528248 MTX1Q13505 466 aa18.33■□□□□ 0.52
PKD2L1-203ENST00000528248 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
PKD2L1-203ENST00000528248 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
PKD2L1-203ENST00000528248 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
PKD2L1-203ENST00000528248 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
PKD2L1-203ENST00000528248 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
PKD2L1-203ENST00000528248 MBD3O95983 291 aa18.32■□□□□ 0.52
PKD2L1-203ENST00000528248 UPF3BQ9BZI7 483 aaKnown RBP18.32■□□□□ 0.52
PKD2L1-203ENST00000528248 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
PKD2L1-203ENST00000528248 RAD50Q92878 1312 aa18.31■□□□□ 0.52
PKD2L1-203ENST00000528248 MAP4K4O95819 1239 aaPredicted RBP18.31■□□□□ 0.52
PKD2L1-203ENST00000528248 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
PKD2L1-203ENST00000528248 HDAC5Q9UQL6 1122 aa18.31■□□□□ 0.52
PKD2L1-203ENST00000528248 PLEKHG5O94827 1062 aa18.3■□□□□ 0.52
PKD2L1-203ENST00000528248 ARHGEF25Q86VW2 580 aa18.3■□□□□ 0.52
PKD2L1-203ENST00000528248 RBM33Q96EV2 1170 aaKnown RBP18.3■□□□□ 0.52
PKD2L1-203ENST00000528248 GCP02774 474 aa18.3■□□□□ 0.52
PKD2L1-203ENST00000528248 NOL8Q76FK4 1167 aaKnown RBP18.3■□□□□ 0.52
PKD2L1-203ENST00000528248 GLRX3O76003 335 aaKnown RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 ANXA1P04083 346 aa18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 FOXD4L5Q5VV16 416 aaPredicted RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 FOXD4L4Q8WXT5 416 aaPredicted RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 CRYBG1Q9Y4K1 1723 aa18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 SLIT3O75094 1523 aa18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
PKD2L1-203ENST00000528248 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 LRSAM1Q6UWE0 723 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 KSR2Q6VAB6 950 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 RBSNQ9H1K0 784 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 TMEM63CQ9P1W3 806 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 MAP3K2Q9Y2U5 619 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
PKD2L1-203ENST00000528248 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
PKD2L1-203ENST00000528248 ERC1Q8IUD2 1116 aa18.27■□□□□ 0.52
PKD2L1-203ENST00000528248 PXDNQ92626 1479 aa18.27■□□□□ 0.52
PKD2L1-203ENST00000528248 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
PKD2L1-203ENST00000528248 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
PKD2L1-203ENST00000528248 TTC14Q96N46 770 aa18.26■□□□□ 0.51
PKD2L1-203ENST00000528248 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
PKD2L1-203ENST00000528248 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
PKD2L1-203ENST00000528248 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 CWC27Q6UX04 472 aaKnown RBP18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 GPATCH3Q96I76 525 aa18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 NAP1L5Q96NT1 182 aaPredicted RBP18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
PKD2L1-203ENST00000528248 LMTK3Q96Q04 1460 aa18.24■□□□□ 0.51
PKD2L1-203ENST00000528248 PROSER3Q2NL68 480 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms