RNA–Protein interactions for RNA: ENST00000527955.5

GPA33-202, Transcript of glycoprotein A33, humanhuman

TSL 5

Gene GPA33, Length 2,549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-202ENST00000527955 HMMRO75330 724 aa17.43■□□□□ 0.38
GPA33-202ENST00000527955 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
GPA33-202ENST00000527955 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
GPA33-202ENST00000527955 CABP4P57796 275 aa17.43■□□□□ 0.38
GPA33-202ENST00000527955 PDIA6Q15084 440 aa17.43■□□□□ 0.38
GPA33-202ENST00000527955 PKNOX2Q96KN3 472 aa17.42■□□□□ 0.38
GPA33-202ENST00000527955 DDX21Q9NR30 783 aaKnown RBP eCLIP17.42■□□□□ 0.38
GPA33-202ENST00000527955 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
GPA33-202ENST00000527955 BTG4Q9NY30 223 aa17.42■□□□□ 0.38
GPA33-202ENST00000527955 GLI3P10071 1580 aa17.42■□□□□ 0.38
GPA33-202ENST00000527955 COL16A1Q07092 1604 aaPredicted RBP17.42■□□□□ 0.38
GPA33-202ENST00000527955 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
GPA33-202ENST00000527955 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
GPA33-202ENST00000527955 TTC5Q8N0Z6 440 aa17.41■□□□□ 0.38
GPA33-202ENST00000527955 LRRFIP2Q9Y608 721 aaKnown RBP17.41■□□□□ 0.38
GPA33-202ENST00000527955 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
GPA33-202ENST00000527955 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
GPA33-202ENST00000527955 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
GPA33-202ENST00000527955 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
GPA33-202ENST00000527955 PNMA6EA0A0J9YXQ4 647 aa17.39■□□□□ 0.37
GPA33-202ENST00000527955 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
GPA33-202ENST00000527955 SNRPA1P09661 255 aaKnown RBP17.39■□□□□ 0.37
GPA33-202ENST00000527955 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
GPA33-202ENST00000527955 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
GPA33-202ENST00000527955 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
GPA33-202ENST00000527955 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
GPA33-202ENST00000527955 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
GPA33-202ENST00000527955 PAPPAQ13219 1627 aa17.38■□□□□ 0.37
GPA33-202ENST00000527955 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
GPA33-202ENST00000527955 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
GPA33-202ENST00000527955 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
GPA33-202ENST00000527955 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
GPA33-202ENST00000527955 EIF5BO60841 1220 aaKnown RBP17.37■□□□□ 0.37
GPA33-202ENST00000527955 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
GPA33-202ENST00000527955 TOGARAM1Q9Y4F4 1720 aa17.37■□□□□ 0.37
GPA33-202ENST00000527955 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
GPA33-202ENST00000527955 APBB1O00213 710 aa17.36■□□□□ 0.37
GPA33-202ENST00000527955 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
GPA33-202ENST00000527955 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
GPA33-202ENST00000527955 OTUD7AQ8TE49 926 aaPredicted RBP17.36■□□□□ 0.37
GPA33-202ENST00000527955 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
GPA33-202ENST00000527955 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
GPA33-202ENST00000527955 ALDH1L1O75891 902 aa17.35■□□□□ 0.37
GPA33-202ENST00000527955 DDX58O95786 925 aaKnown RBP17.35■□□□□ 0.37
GPA33-202ENST00000527955 MYL6BP14649 208 aa17.35■□□□□ 0.37
GPA33-202ENST00000527955 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
GPA33-202ENST00000527955 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
GPA33-202ENST00000527955 PLCH1Q4KWH8 1693 aa17.35■□□□□ 0.37
GPA33-202ENST00000527955 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
GPA33-202ENST00000527955 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
GPA33-202ENST00000527955 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
GPA33-202ENST00000527955 IBTKQ9P2D0 1353 aaPredicted RBP17.34■□□□□ 0.37
GPA33-202ENST00000527955 LINS1Q8NG48 757 aa17.33■□□□□ 0.36
GPA33-202ENST00000527955 POLA2Q14181 598 aa17.32■□□□□ 0.36
GPA33-202ENST00000527955 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
GPA33-202ENST00000527955 TTC22Q5TAA0 569 aa17.32■□□□□ 0.36
GPA33-202ENST00000527955 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
GPA33-202ENST00000527955 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
GPA33-202ENST00000527955 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
GPA33-202ENST00000527955 TNS2Q63HR2 1409 aa17.32■□□□□ 0.36
GPA33-202ENST00000527955 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
GPA33-202ENST00000527955 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
GPA33-202ENST00000527955 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
GPA33-202ENST00000527955 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
GPA33-202ENST00000527955 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
GPA33-202ENST00000527955 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
GPA33-202ENST00000527955 UTYO14607 1347 aa17.3■□□□□ 0.36
GPA33-202ENST00000527955 SRGAP3O43295 1099 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 IGKV5-2P06315 115 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 NRAPQ86VF7 1730 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 MTX1Q13505 466 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 ITGB4P16144 1822 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 ARFGEF2Q9Y6D5 1785 aa17.29■□□□□ 0.36
GPA33-202ENST00000527955 GRM8O00222 908 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 TOM1O60784 492 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 METTL22Q9BUU2 404 aaPredicted RBP17.28■□□□□ 0.36
GPA33-202ENST00000527955 C22orf23Q9BZE7 217 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 ADAMTS2O95450 1211 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 SLC4A3P48751 1232 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
GPA33-202ENST00000527955 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 PIP4K2BP78356 416 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 NBPF14Q5TI25 921 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
GPA33-202ENST00000527955 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 BRPF3Q9ULD4 1205 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 NEURL1BA8MQ27 555 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
GPA33-202ENST00000527955 CDC45O75419 566 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 PDE1AP54750 535 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
GPA33-202ENST00000527955 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
GPA33-202ENST00000527955 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
GPA33-202ENST00000527955 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
GPA33-202ENST00000527955 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms