RNA–Protein interactions for RNA: ENST00000527573.5

CSRP1-210, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-210ENST00000527573 KCNQ3O43525 872 aa17.45■□□□□ 0.38
CSRP1-210ENST00000527573 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
CSRP1-210ENST00000527573 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
CSRP1-210ENST00000527573 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
CSRP1-210ENST00000527573 UBR2Q8IWV8 1755 aa17.44■□□□□ 0.38
CSRP1-210ENST00000527573 TEFQ10587 303 aa17.44■□□□□ 0.38
CSRP1-210ENST00000527573 NFIXQ14938 502 aa17.44■□□□□ 0.38
CSRP1-210ENST00000527573 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
CSRP1-210ENST00000527573 ZNF496Q96IT1 587 aaPredicted RBP17.44■□□□□ 0.38
CSRP1-210ENST00000527573 BCL2L12Q9HB09 334 aa17.44■□□□□ 0.38
CSRP1-210ENST00000527573 GNAT3A8MTJ3 354 aa17.43■□□□□ 0.38
CSRP1-210ENST00000527573 TM4SF1P30408 202 aa17.43■□□□□ 0.38
CSRP1-210ENST00000527573 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
CSRP1-210ENST00000527573 CEP350Q5VT06 3117 aa17.43■□□□□ 0.38
CSRP1-210ENST00000527573 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
CSRP1-210ENST00000527573 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
CSRP1-210ENST00000527573 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 KIF3CO14782 793 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 PIM2Q9P1W9 311 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 NARFQ9UHQ1 456 aa17.41■□□□□ 0.38
CSRP1-210ENST00000527573 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
CSRP1-210ENST00000527573 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
CSRP1-210ENST00000527573 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
CSRP1-210ENST00000527573 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSRP1-210ENST00000527573 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
CSRP1-210ENST00000527573 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
CSRP1-210ENST00000527573 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
CSRP1-210ENST00000527573 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 A1BGP04217 495 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 RASSF7Q02833 373 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 MCM10Q7L590 875 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 TBC1D2BQ9UPU7 963 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.37
CSRP1-210ENST00000527573 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
CSRP1-210ENST00000527573 SERPINB2P05120 415 aa17.38■□□□□ 0.37
CSRP1-210ENST00000527573 VSIG10Q8N0Z9 540 aa17.38■□□□□ 0.37
CSRP1-210ENST00000527573 STARD3NLO95772 234 aa17.37■□□□□ 0.37
CSRP1-210ENST00000527573 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
CSRP1-210ENST00000527573 RNF181Q9P0P0 153 aa17.37■□□□□ 0.37
CSRP1-210ENST00000527573 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
CSRP1-210ENST00000527573 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
CSRP1-210ENST00000527573 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
CSRP1-210ENST00000527573 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
CSRP1-210ENST00000527573 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
CSRP1-210ENST00000527573 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
CSRP1-210ENST00000527573 HSPA6P17066 643 aa17.34■□□□□ 0.37
CSRP1-210ENST00000527573 SCN7AQ01118 1682 aa17.34■□□□□ 0.37
CSRP1-210ENST00000527573 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
CSRP1-210ENST00000527573 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
CSRP1-210ENST00000527573 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
CSRP1-210ENST00000527573 PRELPP51888 382 aa17.33■□□□□ 0.36
CSRP1-210ENST00000527573 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
CSRP1-210ENST00000527573 ANKRD31Q8N7Z5 1873 aa17.31■□□□□ 0.36
CSRP1-210ENST00000527573 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
CSRP1-210ENST00000527573 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.36
CSRP1-210ENST00000527573 SBF1O95248 1867 aa17.31■□□□□ 0.36
CSRP1-210ENST00000527573 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
CSRP1-210ENST00000527573 A0A087WZG4 1122 aa17.3■□□□□ 0.36
CSRP1-210ENST00000527573 CAMTA2O94983 1202 aa17.3■□□□□ 0.36
CSRP1-210ENST00000527573 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
CSRP1-210ENST00000527573 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
CSRP1-210ENST00000527573 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
CSRP1-210ENST00000527573 HTRA3P83110 453 aa17.29■□□□□ 0.36
CSRP1-210ENST00000527573 DZIP3Q86Y13 1208 aaKnown RBP17.29■□□□□ 0.36
CSRP1-210ENST00000527573 TTLL6Q8N841 843 aa17.29■□□□□ 0.36
CSRP1-210ENST00000527573 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
CSRP1-210ENST00000527573 TEX13AQ9BXU3 409 aaPredicted RBP17.29■□□□□ 0.36
CSRP1-210ENST00000527573 RRAGCQ9HB90 399 aa17.29■□□□□ 0.36
CSRP1-210ENST00000527573 H0YIN7 160 aa17.28■□□□□ 0.36
CSRP1-210ENST00000527573 NPHP1O15259 732 aa17.28■□□□□ 0.36
CSRP1-210ENST00000527573 FAM177BA6PVY3 158 aa17.27■□□□□ 0.36
CSRP1-210ENST00000527573 NFKBIEO00221 500 aa17.27■□□□□ 0.36
CSRP1-210ENST00000527573 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
CSRP1-210ENST00000527573 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
CSRP1-210ENST00000527573 CACNA1SQ13698 1873 aa17.27■□□□□ 0.35
CSRP1-210ENST00000527573 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
CSRP1-210ENST00000527573 C21orf2O43822 256 aa17.26■□□□□ 0.35
CSRP1-210ENST00000527573 TOMM70O94826 608 aa17.26■□□□□ 0.35
CSRP1-210ENST00000527573 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
CSRP1-210ENST00000527573 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
CSRP1-210ENST00000527573 CCDC88AQ3V6T2 1871 aa17.25■□□□□ 0.35
CSRP1-210ENST00000527573 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
CSRP1-210ENST00000527573 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
CSRP1-210ENST00000527573 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
CSRP1-210ENST00000527573 CNBD1Q8NA66 436 aa17.25■□□□□ 0.35
CSRP1-210ENST00000527573 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
CSRP1-210ENST00000527573 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
CSRP1-210ENST00000527573 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
CSRP1-210ENST00000527573 LMNB1P20700 586 aa17.23■□□□□ 0.35
CSRP1-210ENST00000527573 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
CSRP1-210ENST00000527573 KDM2BQ8NHM5 1336 aa17.22■□□□□ 0.35
CSRP1-210ENST00000527573 PDE6BP35913 854 aa17.22■□□□□ 0.35
CSRP1-210ENST00000527573 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
CSRP1-210ENST00000527573 SLX4Q8IY92 1834 aa17.21■□□□□ 0.35
CSRP1-210ENST00000527573 ST5P78524 1137 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms