RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 PCNTO95613 3336 aa13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 ANKRD31Q8N7Z5 1873 aa13.02□□□□□ -0.32
TRAPPC4-206ENST00000525303 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-206ENST00000525303 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
TRAPPC4-206ENST00000525303 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
TRAPPC4-206ENST00000525303 ZPR1O75312 459 aa13.01□□□□□ -0.33
TRAPPC4-206ENST00000525303 TM4SF1P30408 202 aa13.01□□□□□ -0.33
TRAPPC4-206ENST00000525303 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
TRAPPC4-206ENST00000525303 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-206ENST00000525303 HMOX1P09601 288 aa13□□□□□ -0.33
TRAPPC4-206ENST00000525303 SLC39A6Q13433 755 aa13□□□□□ -0.33
TRAPPC4-206ENST00000525303 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-206ENST00000525303 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-206ENST00000525303 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
TRAPPC4-206ENST00000525303 RNF181Q9P0P0 153 aa13□□□□□ -0.33
TRAPPC4-206ENST00000525303 COL15A1P39059 1388 aa12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 CYP19A1P11511 503 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
TRAPPC4-206ENST00000525303 NFIXQ14938 502 aa12.98□□□□□ -0.33
TRAPPC4-206ENST00000525303 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
TRAPPC4-206ENST00000525303 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
TRAPPC4-206ENST00000525303 COL11A2P13942 1736 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-206ENST00000525303 HTRA3P83110 453 aa12.97□□□□□ -0.33
TRAPPC4-206ENST00000525303 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-206ENST00000525303 RRAGCQ9HB90 399 aa12.97□□□□□ -0.33
TRAPPC4-206ENST00000525303 KIF7Q2M1P5 1343 aa12.96□□□□□ -0.33
TRAPPC4-206ENST00000525303 RASSF7Q02833 373 aa12.96□□□□□ -0.33
TRAPPC4-206ENST00000525303 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
TRAPPC4-206ENST00000525303 BCORQ6W2J9 1755 aa12.96□□□□□ -0.34
TRAPPC4-206ENST00000525303 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
TRAPPC4-206ENST00000525303 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-206ENST00000525303 SERPINB2P05120 415 aa12.95□□□□□ -0.34
TRAPPC4-206ENST00000525303 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-206ENST00000525303 FSTL1Q12841 308 aa12.95□□□□□ -0.34
TRAPPC4-206ENST00000525303 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
TRAPPC4-206ENST00000525303 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
TRAPPC4-206ENST00000525303 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-206ENST00000525303 SLX4Q8IY92 1834 aa12.93□□□□□ -0.34
TRAPPC4-206ENST00000525303 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-206ENST00000525303 LMNB1P20700 586 aa12.93□□□□□ -0.34
TRAPPC4-206ENST00000525303 C2CD5Q86YS7 1000 aa12.93□□□□□ -0.34
TRAPPC4-206ENST00000525303 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
TRAPPC4-206ENST00000525303 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
TRAPPC4-206ENST00000525303 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-206ENST00000525303 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-206ENST00000525303 STARD3NLO95772 234 aa12.92□□□□□ -0.34
TRAPPC4-206ENST00000525303 PRELPP51888 382 aa12.92□□□□□ -0.34
TRAPPC4-206ENST00000525303 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
TRAPPC4-206ENST00000525303 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
TRAPPC4-206ENST00000525303 H0YIN7 160 aa12.91□□□□□ -0.34
TRAPPC4-206ENST00000525303 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-206ENST00000525303 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
TRAPPC4-206ENST00000525303 ZNF496Q96IT1 587 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-206ENST00000525303 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
TRAPPC4-206ENST00000525303 A0A087WZG4 1122 aa12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 TEFQ10587 303 aa12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 ZNF790Q6PG37 636 aa12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-206ENST00000525303 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
TRAPPC4-206ENST00000525303 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
TRAPPC4-206ENST00000525303 NFKBIEO00221 500 aa12.89□□□□□ -0.35
TRAPPC4-206ENST00000525303 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
TRAPPC4-206ENST00000525303 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
TRAPPC4-206ENST00000525303 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
TRAPPC4-206ENST00000525303 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-206ENST00000525303 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
TRAPPC4-206ENST00000525303 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
TRAPPC4-206ENST00000525303 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAPPC4-206ENST00000525303 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
TRAPPC4-206ENST00000525303 PDE6BP35913 854 aa12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 IL6STP40189 918 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 TEX13AQ9BXU3 409 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 SCN4AP35499 1836 aa12.87□□□□□ -0.35
TRAPPC4-206ENST00000525303 NPC1L1Q9UHC9 1359 aa12.86□□□□□ -0.35
TRAPPC4-206ENST00000525303 C21orf2O43822 256 aa12.86□□□□□ -0.35
TRAPPC4-206ENST00000525303 COL13A1Q5TAT6 717 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-206ENST00000525303 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
TRAPPC4-206ENST00000525303 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
TRAPPC4-206ENST00000525303 NUP98P52948 1817 aa12.85□□□□□ -0.35
TRAPPC4-206ENST00000525303 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
TRAPPC4-206ENST00000525303 A1BGP04217 495 aa12.85□□□□□ -0.35
TRAPPC4-206ENST00000525303 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
TRAPPC4-206ENST00000525303 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-206ENST00000525303 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
TRAPPC4-206ENST00000525303 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 POTECB2RU33 542 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 NPHP1O15259 732 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 KCNQ3O43525 872 aa12.84□□□□□ -0.35
TRAPPC4-206ENST00000525303 CAMTA2O94983 1202 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms