RNA–Protein interactions for RNA: ENST00000525238.2

ABCA7-207, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 1 (best)

Gene ABCA7, Length 1,100 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-207ENST00000525238 DPEP1P16444 411 aa25.86■■□□□ 1.73
ABCA7-207ENST00000525238 ZNF526Q8TF50 670 aaPredicted RBP25.86■■□□□ 1.73
ABCA7-207ENST00000525238 PHACTR3Q96KR7 559 aa25.86■■□□□ 1.73
ABCA7-207ENST00000525238 SIPA1L3O60292 1781 aaPredicted RBP25.86■■□□□ 1.73
ABCA7-207ENST00000525238 DDR1Q08345 913 aa25.85■■□□□ 1.73
ABCA7-207ENST00000525238 FCHSD2O94868 740 aa25.84■■□□□ 1.73
ABCA7-207ENST00000525238 STARD3NLO95772 234 aa25.84■■□□□ 1.73
ABCA7-207ENST00000525238 ZNF790Q6PG37 636 aa25.84■■□□□ 1.73
ABCA7-207ENST00000525238 ZNF330Q9Y3S2 320 aaPredicted RBP25.84■■□□□ 1.73
ABCA7-207ENST00000525238 SENP3-EIF4A1A0A087X0R7 540 aa25.83■■□□□ 1.73
ABCA7-207ENST00000525238 ZNF496Q96IT1 587 aaPredicted RBP25.83■■□□□ 1.73
ABCA7-207ENST00000525238 GPBP1L1Q9HC44 474 aaPredicted RBP25.83■■□□□ 1.73
ABCA7-207ENST00000525238 RTF1Q92541 710 aaKnown RBP25.82■■□□□ 1.72
ABCA7-207ENST00000525238 NARFQ9UHQ1 456 aa25.82■■□□□ 1.72
ABCA7-207ENST00000525238 HEG1Q9ULI3 1381 aa25.82■■□□□ 1.72
ABCA7-207ENST00000525238 POLRMTO00411 1230 aaKnown RBP25.81■■□□□ 1.72
ABCA7-207ENST00000525238 BRCA1P38398 1863 aaKnown RBP25.81■■□□□ 1.72
ABCA7-207ENST00000525238 BTBD11A6QL63 1104 aa25.8■■□□□ 1.72
ABCA7-207ENST00000525238 FMNL2Q96PY5 1086 aa25.8■■□□□ 1.72
ABCA7-207ENST00000525238 ADCY9O60503 1353 aa25.8■■□□□ 1.72
ABCA7-207ENST00000525238 ARHGAP27Q6ZUM4 889 aa25.79■■□□□ 1.72
ABCA7-207ENST00000525238 NPM2Q86SE8 214 aaKnown RBP25.79■■□□□ 1.72
ABCA7-207ENST00000525238 CEMIPQ8WUJ3 1361 aa25.79■■□□□ 1.72
ABCA7-207ENST00000525238 TM4SF1P30408 202 aa25.78■■□□□ 1.72
ABCA7-207ENST00000525238 TEX13AQ9BXU3 409 aaPredicted RBP25.78■■□□□ 1.72
ABCA7-207ENST00000525238 PIM2Q9P1W9 311 aa25.78■■□□□ 1.72
ABCA7-207ENST00000525238 AFDNP55196 1824 aaKnown RBP25.77■■□□□ 1.72
ABCA7-207ENST00000525238 NEFMP07197 916 aa25.77■■□□□ 1.72
ABCA7-207ENST00000525238 NFIXQ14938 502 aa25.77■■□□□ 1.72
ABCA7-207ENST00000525238 MCM10Q7L590 875 aa25.77■■□□□ 1.72
ABCA7-207ENST00000525238 A0A087WZG4 1122 aa25.76■■□□□ 1.71
ABCA7-207ENST00000525238 CHRNA5P30532 468 aa25.76■■□□□ 1.71
ABCA7-207ENST00000525238 BICDL1Q6ZP65 573 aa25.76■■□□□ 1.71
ABCA7-207ENST00000525238 ARFGEF1Q9Y6D6 1849 aa25.75■■□□□ 1.71
ABCA7-207ENST00000525238 KCNQ3O43525 872 aa25.74■■□□□ 1.71
ABCA7-207ENST00000525238 DALRD3Q5D0E6 543 aaKnown RBP25.74■■□□□ 1.71
ABCA7-207ENST00000525238 SERPINB2P05120 415 aa25.73■■□□□ 1.71
ABCA7-207ENST00000525238 KCNA3P22001 575 aa25.73■■□□□ 1.71
ABCA7-207ENST00000525238 EIF5P55010 431 aaKnown RBP25.73■■□□□ 1.71
ABCA7-207ENST00000525238 DCTN1Q14203 1278 aa25.73■■□□□ 1.71
ABCA7-207ENST00000525238 BCL2L12Q9HB09 334 aa25.73■■□□□ 1.71
ABCA7-207ENST00000525238 SCN7AQ01118 1682 aa25.72■■□□□ 1.71
ABCA7-207ENST00000525238 A1BGP04217 495 aa25.71■■□□□ 1.71
ABCA7-207ENST00000525238 TBC1D2BQ9UPU7 963 aa25.71■■□□□ 1.71
ABCA7-207ENST00000525238 NRXN2Q9P2S2 1712 aa25.7■■□□□ 1.7
ABCA7-207ENST00000525238 IL6STP40189 918 aaPredicted RBP25.69■■□□□ 1.7
ABCA7-207ENST00000525238 DLG5Q8TDM6 1919 aa25.67■■□□□ 1.7
ABCA7-207ENST00000525238 NPHP1O15259 732 aa25.67■■□□□ 1.7
ABCA7-207ENST00000525238 PIP4K2AP48426 406 aaPredicted RBP25.67■■□□□ 1.7
ABCA7-207ENST00000525238 TBC1D9BQ66K14 1250 aa25.67■■□□□ 1.7
ABCA7-207ENST00000525238 HTATSF1O43719 755 aaKnown RBP25.66■■□□□ 1.7
ABCA7-207ENST00000525238 USP16Q9Y5T5 823 aa25.66■■□□□ 1.7
ABCA7-207ENST00000525238 PRAMEF22A3QJZ6 481 aa25.65■■□□□ 1.7
ABCA7-207ENST00000525238 SNRPA1P09661 255 aaKnown RBP25.65■■□□□ 1.7
ABCA7-207ENST00000525238 C9orf131Q5VYM1 1079 aa25.65■■□□□ 1.7
ABCA7-207ENST00000525238 CARMIL3Q8ND23 1372 aa25.65■■□□□ 1.7
ABCA7-207ENST00000525238 MAPK8IP3Q9UPT6 1336 aa25.64■■□□□ 1.7
ABCA7-207ENST00000525238 DLEC1Q9Y238 1755 aa25.64■■□□□ 1.7
ABCA7-207ENST00000525238 DZIP3Q86Y13 1208 aaKnown RBP25.64■■□□□ 1.7
ABCA7-207ENST00000525238 C2CD5Q86YS7 1000 aa25.64■■□□□ 1.7
ABCA7-207ENST00000525238 BCORQ6W2J9 1755 aa25.64■■□□□ 1.69
ABCA7-207ENST00000525238 H0YIN7 160 aa25.62■■□□□ 1.69
ABCA7-207ENST00000525238 TAF7Q15545 349 aaPredicted RBP25.62■■□□□ 1.69
ABCA7-207ENST00000525238 CCDC24Q8N4L8 307 aa25.62■■□□□ 1.69
ABCA7-207ENST00000525238 MIS18AQ9NYP9 233 aa25.62■■□□□ 1.69
ABCA7-207ENST00000525238 RNF181Q9P0P0 153 aa25.62■■□□□ 1.69
ABCA7-207ENST00000525238 SETDB2Q96T68 719 aa25.61■■□□□ 1.69
ABCA7-207ENST00000525238 PNNQ9H307 717 aaKnown RBP25.61■■□□□ 1.69
ABCA7-207ENST00000525238 CAMTA2O94983 1202 aa25.6■■□□□ 1.69
ABCA7-207ENST00000525238 TTLL6Q8N841 843 aa25.6■■□□□ 1.69
ABCA7-207ENST00000525238 ZNF622Q969S3 477 aaKnown RBP eCLIP25.59■■□□□ 1.69
ABCA7-207ENST00000525238 ANKRD31Q8N7Z5 1873 aa25.59■■□□□ 1.69
ABCA7-207ENST00000525238 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
ABCA7-207ENST00000525238 KIF3CO14782 793 aa25.58■■□□□ 1.69
ABCA7-207ENST00000525238 DDX10Q13206 875 aaKnown RBP25.58■■□□□ 1.69
ABCA7-207ENST00000525238 NFE2L2Q16236 605 aa25.58■■□□□ 1.69
ABCA7-207ENST00000525238 PRR5LQ6MZQ0 368 aa25.58■■□□□ 1.69
ABCA7-207ENST00000525238 CNBD1Q8NA66 436 aa25.58■■□□□ 1.69
ABCA7-207ENST00000525238 PDE6BP35913 854 aa25.57■■□□□ 1.68
ABCA7-207ENST00000525238 ST5P78524 1137 aa25.57■■□□□ 1.68
ABCA7-207ENST00000525238 RASSF7Q02833 373 aa25.57■■□□□ 1.68
ABCA7-207ENST00000525238 RALBP1Q15311 655 aa25.57■■□□□ 1.68
ABCA7-207ENST00000525238 PLEKHF1Q96S99 279 aa25.57■■□□□ 1.68
ABCA7-207ENST00000525238 ZNF652Q9Y2D9 606 aa25.57■■□□□ 1.68
ABCA7-207ENST00000525238 KDM3BQ7LBC6 1761 aa25.56■■□□□ 1.68
ABCA7-207ENST00000525238 SBF1O95248 1867 aa25.56■■□□□ 1.68
ABCA7-207ENST00000525238 PNISRQ8TF01 805 aaKnown RBP25.56■■□□□ 1.68
ABCA7-207ENST00000525238 THUMPD2Q9BTF0 503 aaKnown RBP25.56■■□□□ 1.68
ABCA7-207ENST00000525238 COL11A2P13942 1736 aaPredicted RBP25.55■■□□□ 1.68
ABCA7-207ENST00000525238 BRIP1Q9BX63 1249 aa25.55■■□□□ 1.68
ABCA7-207ENST00000525238 NMRK2Q9NPI5 230 aa25.55■■□□□ 1.68
ABCA7-207ENST00000525238 ZNF219Q9P2Y4 722 aaPredicted RBP25.55■■□□□ 1.68
ABCA7-207ENST00000525238 CACNA1SQ13698 1873 aa25.54■■□□□ 1.68
ABCA7-207ENST00000525238 NBPF26B4DH59 902 aa25.52■■□□□ 1.68
ABCA7-207ENST00000525238 NBPF10Q6P3W6 841 aaKnown RBP25.52■■□□□ 1.68
ABCA7-207ENST00000525238 NBPF5PQ86XG9 351 aaPredicted RBP25.52■■□□□ 1.68
ABCA7-207ENST00000525238 C16orf71Q8IYS4 520 aaPredicted RBP25.52■■□□□ 1.68
ABCA7-207ENST00000525238 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
ABCA7-207ENST00000525238 NBPF15Q8N660 670 aa25.52■■□□□ 1.68
ABCA7-207ENST00000525238 PDZRN3Q9UPQ7 1066 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms