RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 NFATC2IPQ8NCF5 419 aa20.32■□□□□ 0.84
BEST1-203ENST00000524877 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
BEST1-203ENST00000524877 TMEM57Q8N5G2 664 aa20.32■□□□□ 0.84
BEST1-203ENST00000524877 MAP3K12Q12852 859 aa20.32■□□□□ 0.84
BEST1-203ENST00000524877 MAP3K19Q56UN5 1328 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 EYA1Q99502 592 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 HDAC9Q9UKV0 1011 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 RXRBP28702 533 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 MTHFSDQ2M296 383 aaKnown RBP20.31■□□□□ 0.84
BEST1-203ENST00000524877 CEP89Q96ST8 783 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 IL1RAPL2Q9NP60 686 aa20.31■□□□□ 0.84
BEST1-203ENST00000524877 AEBP1Q8IUX7 1158 aa20.3■□□□□ 0.84
BEST1-203ENST00000524877 QTRT2Q9H974 415 aaKnown RBP20.3■□□□□ 0.84
BEST1-203ENST00000524877 SPTY2D1Q68D10 685 aaPredicted RBP20.3■□□□□ 0.84
BEST1-203ENST00000524877 MAP7D2Q96T17 732 aa20.3■□□□□ 0.84
BEST1-203ENST00000524877 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
BEST1-203ENST00000524877 F6X3S4 739 aa20.3■□□□□ 0.84
BEST1-203ENST00000524877 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
BEST1-203ENST00000524877 WWC2Q6AWC2 1192 aa20.3■□□□□ 0.84
BEST1-203ENST00000524877 UBAC1Q9BSL1 405 aa20.3■□□□□ 0.84
BEST1-203ENST00000524877 ARAP3Q8WWN8 1544 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
BEST1-203ENST00000524877 LDHCP07864 332 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 LDHAL6AQ6ZMR3 332 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
BEST1-203ENST00000524877 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.29■□□□□ 0.84
BEST1-203ENST00000524877 FAM13BQ9NYF5 915 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 SSH1Q8WYL5 1049 aa20.29■□□□□ 0.84
BEST1-203ENST00000524877 GZF1Q9H116 711 aaPredicted RBP20.29■□□□□ 0.84
BEST1-203ENST00000524877 ZNF335Q9H4Z2 1342 aaPredicted RBP20.28■□□□□ 0.84
BEST1-203ENST00000524877 KDM4AO75164 1064 aa20.28■□□□□ 0.84
BEST1-203ENST00000524877 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
BEST1-203ENST00000524877 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
BEST1-203ENST00000524877 TMEM132AQ24JP5 1023 aa20.27■□□□□ 0.84
BEST1-203ENST00000524877 CLEC11AQ9Y240 323 aa20.27■□□□□ 0.84
BEST1-203ENST00000524877 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.83
BEST1-203ENST00000524877 UBE3BQ7Z3V4 1068 aa20.27■□□□□ 0.83
BEST1-203ENST00000524877 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.83
BEST1-203ENST00000524877 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.83
BEST1-203ENST00000524877 SHROOM2Q13796 1616 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 FOXD4L6Q3SYB3 417 aaPredicted RBP20.26■□□□□ 0.83
BEST1-203ENST00000524877 FOXD4L3Q6VB84 417 aaPredicted RBP20.26■□□□□ 0.83
BEST1-203ENST00000524877 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 CHD1LQ86WJ1 897 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 RBM17Q96I25 401 aaKnown RBP20.26■□□□□ 0.83
BEST1-203ENST00000524877 PI4KAP2A4QPH2 592 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 GSTO1P78417 241 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 PI4KAP1Q8N8J0 262 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 PLXNC1O60486 1568 aa20.26■□□□□ 0.83
BEST1-203ENST00000524877 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 NUP133Q8WUM0 1156 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 ADCY10Q96PN6 1610 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 TSR1Q2NL82 804 aaKnown RBP20.25■□□□□ 0.83
BEST1-203ENST00000524877 JDP2Q8WYK2 163 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 IMMTQ16891 758 aaKnown RBP20.25■□□□□ 0.83
BEST1-203ENST00000524877 MKNK2Q9HBH9 465 aa20.25■□□□□ 0.83
BEST1-203ENST00000524877 TTF1Q15361 905 aaPredicted RBP20.25■□□□□ 0.83
BEST1-203ENST00000524877 RARSP54136 660 aaKnown RBP20.24■□□□□ 0.83
BEST1-203ENST00000524877 ANKRD1Q15327 319 aa20.24■□□□□ 0.83
BEST1-203ENST00000524877 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
BEST1-203ENST00000524877 MTERF4Q7Z6M4 381 aaKnown RBP20.24■□□□□ 0.83
BEST1-203ENST00000524877 ANKRD20A12PQ8NF67 263 aa20.24■□□□□ 0.83
BEST1-203ENST00000524877 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
BEST1-203ENST00000524877 CFAP65Q6ZU64 1925 aaKnown RBP20.24■□□□□ 0.83
BEST1-203ENST00000524877 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
BEST1-203ENST00000524877 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
BEST1-203ENST00000524877 BAG3O95817 575 aa20.23■□□□□ 0.83
BEST1-203ENST00000524877 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
BEST1-203ENST00000524877 GLRX3O76003 335 aaKnown RBP20.23■□□□□ 0.83
BEST1-203ENST00000524877 ZNF804AQ7Z570 1209 aa20.23■□□□□ 0.83
BEST1-203ENST00000524877 EYA3Q99504 573 aa20.22■□□□□ 0.83
BEST1-203ENST00000524877 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
BEST1-203ENST00000524877 TESK2Q96S53 571 aa20.21■□□□□ 0.83
BEST1-203ENST00000524877 ABCC3O15438 1527 aa20.21■□□□□ 0.83
BEST1-203ENST00000524877 LMOD1P29536 600 aaPredicted RBP20.21■□□□□ 0.83
BEST1-203ENST00000524877 ZGPATQ8N5A5 531 aaKnown RBP20.21■□□□□ 0.83
BEST1-203ENST00000524877 TPM1P09493 284 aa20.21■□□□□ 0.83
BEST1-203ENST00000524877 OGFOD1Q8N543 542 aa20.21■□□□□ 0.83
BEST1-203ENST00000524877 UQCRFS1P1P0C7P4 283 aa20.21■□□□□ 0.83
BEST1-203ENST00000524877 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 HLA-DOAP06340 250 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 PRIM1P49642 420 aaKnown RBP20.2■□□□□ 0.82
BEST1-203ENST00000524877 KRT32Q14532 448 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 ANXA1P04083 346 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 CCDC87Q9NVE4 849 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 METP08581 1390 aa20.2■□□□□ 0.82
BEST1-203ENST00000524877 CDKL5O76039 1030 aa20.19■□□□□ 0.82
BEST1-203ENST00000524877 MCM2P49736 904 aa20.19■□□□□ 0.82
BEST1-203ENST00000524877 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
BEST1-203ENST00000524877 KSR2Q6VAB6 950 aa20.19■□□□□ 0.82
BEST1-203ENST00000524877 ZNF444Q8N0Y2 327 aaPredicted RBP20.19■□□□□ 0.82
BEST1-203ENST00000524877 GOLGA6L19H0YKK7 550 aa20.19■□□□□ 0.82
BEST1-203ENST00000524877 NF2P35240 595 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms