RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 PPP1R15AO75807 674 aaPredicted RBP10.52□□□□□ -0.73
SKP1-213ENST00000524288 UBAP2LQ14157 1087 aaKnown RBP10.52□□□□□ -0.73
SKP1-213ENST00000524288 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 CDCA8Q53HL2 280 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 FIGNL1Q6PIW4 674 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 PBXIP1Q96AQ6 731 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
SKP1-213ENST00000524288 TFIP11Q9UBB9 837 aaKnown RBP10.52□□□□□ -0.73
SKP1-213ENST00000524288 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
SKP1-213ENST00000524288 BCRP11274 1271 aa10.51□□□□□ -0.73
SKP1-213ENST00000524288 MARSP56192 900 aaKnown RBP10.51□□□□□ -0.73
SKP1-213ENST00000524288 PSME1Q06323 249 aa10.51□□□□□ -0.73
SKP1-213ENST00000524288 NLRP8Q86W28 1048 aa10.51□□□□□ -0.73
SKP1-213ENST00000524288 SCARF2Q96GP6 870 aaPredicted RBP10.51□□□□□ -0.73
SKP1-213ENST00000524288 ACIN1Q9UKV3 1341 aaKnown RBP10.51□□□□□ -0.73
SKP1-213ENST00000524288 ATP9BO43861 1147 aa10.5□□□□□ -0.73
SKP1-213ENST00000524288 ATP4AP20648 1035 aa10.5□□□□□ -0.73
SKP1-213ENST00000524288 GSK3AP49840 483 aa10.5□□□□□ -0.73
SKP1-213ENST00000524288 ATP1A2P50993 1020 aa10.5□□□□□ -0.73
SKP1-213ENST00000524288 ACDQ96AP0 544 aa10.5□□□□□ -0.73
SKP1-213ENST00000524288 ZDHHC3Q9NYG2 299 aa10.5□□□□□ -0.73
SKP1-213ENST00000524288 CARNS1A5YM72 827 aa10.49□□□□□ -0.73
SKP1-213ENST00000524288 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
SKP1-213ENST00000524288 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
SKP1-213ENST00000524288 USP17L2Q6R6M4 530 aa10.49□□□□□ -0.73
SKP1-213ENST00000524288 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
SKP1-213ENST00000524288 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
SKP1-213ENST00000524288 KANK3Q6NY19 840 aa10.48□□□□□ -0.73
SKP1-213ENST00000524288 DEPDC4Q8N2C3 294 aa10.48□□□□□ -0.73
SKP1-213ENST00000524288 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
SKP1-213ENST00000524288 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
SKP1-213ENST00000524288 ZNF358Q9NW07 568 aa10.48□□□□□ -0.73
SKP1-213ENST00000524288 SCHIP1Q9P0W5 487 aaPredicted RBP10.48□□□□□ -0.73
SKP1-213ENST00000524288 RASSF7Q02833 373 aa10.47□□□□□ -0.73
SKP1-213ENST00000524288 TMEM151AQ8N4L1 468 aa10.47□□□□□ -0.73
SKP1-213ENST00000524288 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
SKP1-213ENST00000524288 DNAAF2Q9NVR5 837 aaKnown RBP10.46□□□□□ -0.73
SKP1-213ENST00000524288 CABP1Q9NZU7 370 aa10.46□□□□□ -0.73
SKP1-213ENST00000524288 GDF2Q9UK05 429 aaPredicted RBP10.46□□□□□ -0.73
SKP1-213ENST00000524288 PCDHGC4Q9Y5F7 938 aa10.46□□□□□ -0.73
SKP1-213ENST00000524288 OIP5O43482 229 aa10.45□□□□□ -0.74
SKP1-213ENST00000524288 FGFR3P22607 806 aa10.45□□□□□ -0.74
SKP1-213ENST00000524288 SRPK2P78362 688 aaKnown RBP10.45□□□□□ -0.74
SKP1-213ENST00000524288 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.45□□□□□ -0.743e-6■■■■■ 28.6
SKP1-213ENST00000524288 ABHD17AQ96GS6 310 aa10.45□□□□□ -0.74
SKP1-213ENST00000524288 MAFBQ9Y5Q3 323 aaPredicted RBP10.45□□□□□ -0.74
SKP1-213ENST00000524288 BNIP3LO60238 219 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 GDF11O95390 407 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 EPHA4P54764 986 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 FOXK2Q01167 660 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 LARGE2Q8N3Y3 721 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 USP3Q9Y6I4 520 aa10.44□□□□□ -0.74
SKP1-213ENST00000524288 M0R2N6 131 aa10.43□□□□□ -0.74
SKP1-213ENST00000524288 TEAD4Q15561 434 aa10.43□□□□□ -0.74
SKP1-213ENST00000524288 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
SKP1-213ENST00000524288 PODNQ7Z5L7 613 aa10.43□□□□□ -0.74
SKP1-213ENST00000524288 GOLGA6L1Q8N7Z2 621 aa10.43□□□□□ -0.74
SKP1-213ENST00000524288 KLRG1Q96E93 195 aa10.43□□□□□ -0.74
SKP1-213ENST00000524288 ZCCHC2Q9C0B9 1178 aaKnown RBP10.43□□□□□ -0.74
SKP1-213ENST00000524288 GPC6Q9Y625 555 aaPredicted RBP10.43□□□□□ -0.74
SKP1-213ENST00000524288 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
SKP1-213ENST00000524288 PHF20L1A8MW92 1017 aa10.42□□□□□ -0.74
SKP1-213ENST00000524288 ATXN7O15265 892 aaPredicted RBP10.42□□□□□ -0.74
SKP1-213ENST00000524288 BMP4P12644 408 aa10.42□□□□□ -0.74
SKP1-213ENST00000524288 IRS1P35568 1242 aa10.42□□□□□ -0.74
SKP1-213ENST00000524288 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
SKP1-213ENST00000524288 TPCN2Q8NHX9 752 aa10.42□□□□□ -0.74
SKP1-213ENST00000524288 ZBTB7BO15156 539 aaPredicted RBP10.41□□□□□ -0.74
SKP1-213ENST00000524288 CLDN10P78369 228 aa10.41□□□□□ -0.74
SKP1-213ENST00000524288 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
SKP1-213ENST00000524288 SIX5Q8N196 739 aa10.41□□□□□ -0.74
SKP1-213ENST00000524288 BEND7Q8N7W2 519 aaPredicted RBP10.41□□□□□ -0.74
SKP1-213ENST00000524288 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
SKP1-213ENST00000524288 FAM182BQ5T319 152 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 SLCO4C1Q6ZQN7 724 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 SLC9A9Q8IVB4 645 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 KCTD17Q8N5Z5 321 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 ZIC5Q96T25 663 aa10.4□□□□□ -0.74
SKP1-213ENST00000524288 DNMT3AQ9Y6K1 912 aaPredicted RBP10.4□□□□□ -0.74
SKP1-213ENST00000524288 FAM157BP0CG42 384 aa10.39□□□□□ -0.75
SKP1-213ENST00000524288 NOS2P35228 1153 aa10.39□□□□□ -0.75
SKP1-213ENST00000524288 ZDHHC1Q8WTX9 485 aa10.39□□□□□ -0.75
SKP1-213ENST00000524288 KIAA1024Q9UPX6 916 aa10.39□□□□□ -0.75
SKP1-213ENST00000524288 RBM19Q9Y4C8 960 aaKnown RBP10.39□□□□□ -0.75
SKP1-213ENST00000524288 GJA3Q9Y6H8 435 aa10.39□□□□□ -0.75
SKP1-213ENST00000524288 C2CD2LO14523 706 aa10.38□□□□□ -0.75
SKP1-213ENST00000524288 ARAFP10398 606 aa10.38□□□□□ -0.75
SKP1-213ENST00000524288 TNP2Q05952 138 aa10.38□□□□□ -0.75
SKP1-213ENST00000524288 BICDL1Q6ZP65 573 aa10.38□□□□□ -0.75
SKP1-213ENST00000524288 TNS4Q8IZW8 715 aa10.38□□□□□ -0.75
SKP1-213ENST00000524288 AVENQ9NQS1 362 aaPredicted RBP10.38□□□□□ -0.75
SKP1-213ENST00000524288 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 EML1O00423 815 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 MAPTP10636 758 aaKnown RBP10.37□□□□□ -0.75
SKP1-213ENST00000524288 HIRAP54198 1017 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms