RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 F13A1P00488 732 aa12.32□□□□□ -0.44
SPIDR-225ENST00000524141 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-225ENST00000524141 DMTNQ08495 405 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 TTC14Q96N46 770 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 SMC3Q9UQE7 1217 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 PEAK1Q9H792 1746 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 SYT1P21579 422 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
SPIDR-225ENST00000524141 SGSM2O43147 1006 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 FUCA2Q9BTY2 467 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 PDIA4P13667 645 aaKnown RBP12.3□□□□□ -0.44
SPIDR-225ENST00000524141 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 METP08581 1390 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-225ENST00000524141 TXNDC2Q86VQ3 553 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
SPIDR-225ENST00000524141 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
SPIDR-225ENST00000524141 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 FIBPO43427 364 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
SPIDR-225ENST00000524141 AK2P54819 239 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 GTPBP4Q9BZE4 634 aaKnown RBP12.29□□□□□ -0.44
SPIDR-225ENST00000524141 KDRP35968 1356 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 ZSCAN20P17040 1043 aaPredicted RBP12.29□□□□□ -0.44
SPIDR-225ENST00000524141 MPNDQ8N594 471 aa12.29□□□□□ -0.44
SPIDR-225ENST00000524141 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
SPIDR-225ENST00000524141 IL25Q9H293 177 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
SPIDR-225ENST00000524141 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
SPIDR-225ENST00000524141 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
SPIDR-225ENST00000524141 BCL2L12Q9HB09 334 aa12.28□□□□□ -0.44
SPIDR-225ENST00000524141 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.44
SPIDR-225ENST00000524141 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.44
SPIDR-225ENST00000524141 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.44
SPIDR-225ENST00000524141 CRYBG1Q9Y4K1 1723 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 AGLP35573 1532 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 C17orf53Q8N3J3 647 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-225ENST00000524141 PDCL2Q8N4E4 241 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 IL1RAPL2Q9NP60 686 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 USP6P35125 1406 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
SPIDR-225ENST00000524141 RUFY2Q8WXA3 655 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 FLT4P35916 1363 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 FOXO3O43524 673 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
SPIDR-225ENST00000524141 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 VPS53Q5VIR6 699 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 RHPN1Q8TCX5 695 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 TSC1Q92574 1164 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
SPIDR-225ENST00000524141 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
SPIDR-225ENST00000524141 SURF6O75683 361 aaKnown RBP12.25□□□□□ -0.45
SPIDR-225ENST00000524141 CASTP20810 708 aaKnown RBP12.25□□□□□ -0.45
SPIDR-225ENST00000524141 POLA2Q14181 598 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 MTMR6Q9Y217 621 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 ACEP12821 1306 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 CTIFO43310 598 aaKnown RBP12.25□□□□□ -0.45
SPIDR-225ENST00000524141 KIF20AO95235 890 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 GJB2P29033 226 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 ANKRD7Q92527 254 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
SPIDR-225ENST00000524141 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
SPIDR-225ENST00000524141 DNM1Q05193 864 aaKnown RBP12.24□□□□□ -0.45
SPIDR-225ENST00000524141 JARID2Q92833 1246 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-225ENST00000524141 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
SPIDR-225ENST00000524141 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
SPIDR-225ENST00000524141 CBX1P83916 185 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 PYCARDQ9ULZ3 195 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 ELP1O95163 1332 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 GLRX3O76003 335 aaKnown RBP12.24□□□□□ -0.45
SPIDR-225ENST00000524141 KRT85P78386 507 aa12.24□□□□□ -0.45
SPIDR-225ENST00000524141 SYCP1Q15431 976 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 984.2 ms