RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 KCPQ6ZWJ8 1503 aa11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 FKBP8Q14318 412 aa11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 C4AP0C0L4 1744 aa11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 TJP1Q07157 1748 aa11.82□□□□□ -0.52
CTNNA1-240ENST00000523912 FCHSD2O94868 740 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 DPEP1P16444 411 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 DNAJC5GQ8N7S2 189 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 FMNL2Q96PY5 1086 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 PIM2Q9P1W9 311 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 ZBTB1Q9Y2K1 713 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
CTNNA1-240ENST00000523912 MYH14Q7Z406 1995 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 KCNA3P22001 575 aa11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 DDR1Q08345 913 aa11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 FSTL1Q12841 308 aa11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-240ENST00000523912 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 BTBD11A6QL63 1104 aa11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 POLRMTO00411 1230 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 PHACTR3Q96KR7 559 aa11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 KDM2BQ8NHM5 1336 aa11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 ZC3H4Q9UPT8 1303 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-240ENST00000523912 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-240ENST00000523912 C9orf131Q5VYM1 1079 aa11.78□□□□□ -0.52
CTNNA1-240ENST00000523912 ZNF330Q9Y3S2 320 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-240ENST00000523912 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-240ENST00000523912 NFIXQ14938 502 aa11.77□□□□□ -0.53
CTNNA1-240ENST00000523912 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-240ENST00000523912 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-240ENST00000523912 NMRK2Q9NPI5 230 aa11.77□□□□□ -0.53
CTNNA1-240ENST00000523912 TM4SF1P30408 202 aa11.76□□□□□ -0.53
CTNNA1-240ENST00000523912 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-240ENST00000523912 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-240ENST00000523912 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
CTNNA1-240ENST00000523912 UBR2Q8IWV8 1755 aa11.76□□□□□ -0.53
CTNNA1-240ENST00000523912 CEP350Q5VT06 3117 aa11.76□□□□□ -0.53
CTNNA1-240ENST00000523912 NPHP1O15259 732 aa11.75□□□□□ -0.53
CTNNA1-240ENST00000523912 MCM10Q7L590 875 aa11.75□□□□□ -0.53
CTNNA1-240ENST00000523912 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
CTNNA1-240ENST00000523912 SERPINB2P05120 415 aa11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 CHRNA5P30532 468 aa11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 PNISRQ8TF01 805 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 KLRG1Q96E93 195 aa11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 PDZRN3Q9UPQ7 1066 aa11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 CARMIL3Q8ND23 1372 aa11.74□□□□□ -0.53
CTNNA1-240ENST00000523912 RALBP1Q15311 655 aa11.73□□□□□ -0.53
CTNNA1-240ENST00000523912 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
CTNNA1-240ENST00000523912 RNF181Q9P0P0 153 aa11.73□□□□□ -0.53
CTNNA1-240ENST00000523912 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
CTNNA1-240ENST00000523912 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 H0YIN7 160 aa11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 SMC1BQ8NDV3 1235 aa11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-240ENST00000523912 KCNQ3O43525 872 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 A1BGP04217 495 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 PDE6BP35913 854 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 ST5P78524 1137 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 NFE2L2Q16236 605 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 CNBD1Q8NA66 436 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 SBF1O95248 1867 aa11.71□□□□□ -0.53
CTNNA1-240ENST00000523912 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.54
CTNNA1-240ENST00000523912 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-240ENST00000523912 CAMTA2O94983 1202 aa11.7□□□□□ -0.54
CTNNA1-240ENST00000523912 LMNB1P20700 586 aa11.7□□□□□ -0.54
CTNNA1-240ENST00000523912 TBC1D9BQ66K14 1250 aa11.7□□□□□ -0.54
CTNNA1-240ENST00000523912 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
CTNNA1-240ENST00000523912 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
CTNNA1-240ENST00000523912 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 RGL2O15211 777 aa11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 CLEC4GQ6UXB4 293 aa11.69□□□□□ -0.54
CTNNA1-240ENST00000523912 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
CTNNA1-240ENST00000523912 NBPF5PQ86XG9 351 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-240ENST00000523912 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.54
CTNNA1-240ENST00000523912 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 258.4 ms