RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
SDCBP-212ENST00000523483 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
SDCBP-212ENST00000523483 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
SDCBP-212ENST00000523483 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
SDCBP-212ENST00000523483 SIK1P57059 783 aa11.87□□□□□ -0.51
SDCBP-212ENST00000523483 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
SDCBP-212ENST00000523483 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
SDCBP-212ENST00000523483 STARD3NLO95772 234 aa11.87□□□□□ -0.51
SDCBP-212ENST00000523483 FAM196AQ6ZSG2 479 aa11.87□□□□□ -0.51
SDCBP-212ENST00000523483 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
SDCBP-212ENST00000523483 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
SDCBP-212ENST00000523483 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
SDCBP-212ENST00000523483 CCDC136Q96JN2 1154 aa11.86□□□□□ -0.51
SDCBP-212ENST00000523483 API5Q9BZZ5 524 aaKnown RBP11.86□□□□□ -0.51
SDCBP-212ENST00000523483 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
SDCBP-212ENST00000523483 HOXB7P09629 217 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
SDCBP-212ENST00000523483 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
SDCBP-212ENST00000523483 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.85□□□□□ -0.51
SDCBP-212ENST00000523483 SMARCC1Q92922 1105 aaPredicted RBP11.84□□□□□ -0.51
SDCBP-212ENST00000523483 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
SDCBP-212ENST00000523483 CCNL1Q9UK58 526 aaPredicted RBP11.84□□□□□ -0.51
SDCBP-212ENST00000523483 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 TOGARAM1Q9Y4F4 1720 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 MS4A1P11836 297 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 PDE3AQ14432 1141 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 ZBTB1Q9Y2K1 713 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 MRC1P22897 1456 aa11.84□□□□□ -0.51
SDCBP-212ENST00000523483 APBA3O96018 575 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 ITPK1Q13572 414 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
SDCBP-212ENST00000523483 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
SDCBP-212ENST00000523483 NBPF14Q5TI25 921 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
SDCBP-212ENST00000523483 NBPF15Q8N660 670 aa11.83□□□□□ -0.52
SDCBP-212ENST00000523483 RGS12O14924 1447 aa11.82□□□□□ -0.52
SDCBP-212ENST00000523483 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
SDCBP-212ENST00000523483 PTPRCP08575 1304 aa11.82□□□□□ -0.52
SDCBP-212ENST00000523483 TTLL7Q6ZT98 887 aa11.82□□□□□ -0.52
SDCBP-212ENST00000523483 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
SDCBP-212ENST00000523483 TBC1D2BQ9UPU7 963 aa11.82□□□□□ -0.52
SDCBP-212ENST00000523483 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
SDCBP-212ENST00000523483 PHF14O94880 888 aa11.82□□□□□ -0.52
SDCBP-212ENST00000523483 PDIA6Q15084 440 aa11.82□□□□□ -0.52
SDCBP-212ENST00000523483 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
SDCBP-212ENST00000523483 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
SDCBP-212ENST00000523483 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
SDCBP-212ENST00000523483 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
SDCBP-212ENST00000523483 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
SDCBP-212ENST00000523483 ITGB4P16144 1822 aa11.81□□□□□ -0.52
SDCBP-212ENST00000523483 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
SDCBP-212ENST00000523483 CWF19L2Q2TBE0 894 aaKnown RBP11.8□□□□□ -0.52
SDCBP-212ENST00000523483 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 PPP4R2Q9NY27 417 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 ARHGAP45Q92619 1136 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
SDCBP-212ENST00000523483 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 VSIG10Q8N0Z9 540 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 MYD88Q99836 296 aa11.8□□□□□ -0.52
SDCBP-212ENST00000523483 GNPATO15228 680 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 KIF6Q6ZMV9 814 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
SDCBP-212ENST00000523483 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 MSH5O43196 834 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 GPTP24298 496 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
SDCBP-212ENST00000523483 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 LINC00116Q8NCU8 138 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 MEIS3Q99687 375 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
SDCBP-212ENST00000523483 SF3B2Q13435 895 aaKnown RBP11.78□□□□□ -0.52
SDCBP-212ENST00000523483 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-212ENST00000523483 ABCC4O15439 1325 aa11.77□□□□□ -0.52
SDCBP-212ENST00000523483 CCT4P50991 539 aaKnown RBP11.77□□□□□ -0.52
SDCBP-212ENST00000523483 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.52
SDCBP-212ENST00000523483 AK7Q96M32 723 aa11.77□□□□□ -0.52
SDCBP-212ENST00000523483 BRWD3Q6RI45 1802 aa11.77□□□□□ -0.53
SDCBP-212ENST00000523483 C5P01031 1676 aa11.77□□□□□ -0.53
SDCBP-212ENST00000523483 BICDL1Q6ZP65 573 aa11.77□□□□□ -0.53
SDCBP-212ENST00000523483 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
SDCBP-212ENST00000523483 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
SDCBP-212ENST00000523483 ADCY9O60503 1353 aa11.76□□□□□ -0.53
SDCBP-212ENST00000523483 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
SDCBP-212ENST00000523483 APBB1O00213 710 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms