RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SBNO1A3KN83 1393 aa15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 MCM4P33991 863 aa15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 TTC22Q5TAA0 569 aa15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 G2E3Q7L622 706 aa15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 PRDM15P57071 1507 aaPredicted RBP15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 WDR33Q9C0J8 1336 aaKnown RBP15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 HSP90AB3PQ58FF7 597 aa15.56■□□□□ 0.08
PCDHGB1-201ENST00000523390 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 TDO2P48775 406 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 SNRKQ9NRH2 765 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 PHAXQ9H814 394 aaKnown RBP15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 ZPR1O75312 459 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 KSR2Q6VAB6 950 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 KDM5CP41229 1560 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 CTNNA3Q9UI47 895 aa15.55■□□□□ 0.08
PCDHGB1-201ENST00000523390 UBAP1LF5GYI3 381 aa15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 KRT32Q14532 448 aa15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 XBP1P17861 261 aa15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 SDSP20132 328 aa15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 CWF19L2Q2TBE0 894 aaKnown RBP15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 LDHAL6AQ6ZMR3 332 aa15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 LARP6Q9BRS8 491 aaKnown RBP15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 PPP1R1BQ9UD71 204 aaPredicted RBP15.54■□□□□ 0.08
PCDHGB1-201ENST00000523390 GRM8O00222 908 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 IL2RBP14784 551 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 MRE11P49959 708 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 AIDAQ96BJ3 306 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 RNMTO43148 476 aaKnown RBP15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 DDX11Q96FC9 970 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 SLC3A2P08195 630 aaKnown RBP15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 CCDC83Q8IWF9 413 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 NUP133Q8WUM0 1156 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
PCDHGB1-201ENST00000523390 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 PDE1AP54750 535 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 ATP8B2P98198 1209 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 STK38Q15208 465 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 TBC1D32Q96NH3 1257 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 LGR6Q9HBX8 967 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 PA2G4Q9UQ80 394 aaKnown RBP15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 BRMS1Q9HCU9 246 aa15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 CTDP1Q9Y5B0 961 aaPredicted RBP15.52■□□□□ 0.08
PCDHGB1-201ENST00000523390 HECW2Q9P2P5 1572 aa15.52■□□□□ 0.07
PCDHGB1-201ENST00000523390 NBPF6Q5VWK0 638 aa15.52■□□□□ 0.07
PCDHGB1-201ENST00000523390 CEP85Q6P2H3 762 aa15.52■□□□□ 0.07
PCDHGB1-201ENST00000523390 ZSCAN31Q96LW9 406 aaPredicted RBP15.52■□□□□ 0.07
PCDHGB1-201ENST00000523390 NBPF4Q96M43 638 aa15.52■□□□□ 0.07
PCDHGB1-201ENST00000523390 BLMP54132 1417 aaPredicted RBP15.52■□□□□ 0.07
PCDHGB1-201ENST00000523390 GOLIM4O00461 696 aa15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 CHL1O00533 1208 aa15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 ALDH1L1O75891 902 aa15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 LMBR1LQ6UX01 489 aa15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 KDM5AP29375 1690 aaKnown RBP15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 KINO60870 393 aaKnown RBP15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 SIRT1Q96EB6 747 aa15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 HOOK1Q9UJC3 728 aaKnown RBP15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 IKQ13123 557 aaPredicted RBP15.51■□□□□ 0.07
PCDHGB1-201ENST00000523390 TOM1O60784 492 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 IMMTQ16891 758 aaKnown RBP15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 EFCAB6Q5THR3 1501 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 KRT85P78386 507 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 ATP2B2Q01814 1243 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 SMC5Q8IY18 1101 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 MYOM2P54296 1465 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 CCDC69A6NI79 296 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 C8orf34Q49A92 452 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 DCTPP1Q9H773 170 aa15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
PCDHGB1-201ENST00000523390 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
PCDHGB1-201ENST00000523390 ZBTB7BO15156 539 aaPredicted RBP15.49■□□□□ 0.07
PCDHGB1-201ENST00000523390 DDB1Q16531 1140 aa15.49■□□□□ 0.07
PCDHGB1-201ENST00000523390 TRIM22Q8IYM9 498 aa15.49■□□□□ 0.07
PCDHGB1-201ENST00000523390 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
PCDHGB1-201ENST00000523390 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 UBAC1Q9BSL1 405 aa15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 ADCY10Q96PN6 1610 aa15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 DDX46Q7L014 1031 aaKnown RBP15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 BTG4Q9NY30 223 aa15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 ME1P48163 572 aa15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 CCDC47Q96A33 483 aaKnown RBP15.48■□□□□ 0.07
PCDHGB1-201ENST00000523390 MINDY4BA8MYZ0 360 aa15.47■□□□□ 0.07
PCDHGB1-201ENST00000523390 TPM3P06753 285 aa15.47■□□□□ 0.07
PCDHGB1-201ENST00000523390 CAVIN4Q5BKX8 364 aa15.47■□□□□ 0.07
PCDHGB1-201ENST00000523390 SLC5A1P13866 664 aa15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 SSFA2P28290 1259 aa15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 ABCC3O15438 1527 aa15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 ROBO2Q9HCK4 1378 aa15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
PCDHGB1-201ENST00000523390 TCEAL9Q9UHQ7 104 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms