RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 FMNL2Q96PY5 1086 aa10.69□□□□□ -0.7
CSMD1-212ENST00000523387 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
CSMD1-212ENST00000523387 SCAND2PQ9GZW5 306 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-212ENST00000523387 C9orf78Q9NZ63 289 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-212ENST00000523387 KINO60870 393 aaKnown RBP10.69□□□□□ -0.7
CSMD1-212ENST00000523387 KIF18AQ8NI77 898 aa10.69□□□□□ -0.7
CSMD1-212ENST00000523387 RTL1A6NKG5 1358 aa10.69□□□□□ -0.7
CSMD1-212ENST00000523387 RAB11FIP3O75154 756 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 SMC2O95347 1197 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 BLOC1S2Q6QNY1 142 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 IQGAP1P46940 1657 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 FLIIQ13045 1269 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
CSMD1-212ENST00000523387 SLC52A1Q9NWF4 448 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 CLTCL1P53675 1640 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 FANCAO15360 1455 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 MYOM2P54296 1465 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
CSMD1-212ENST00000523387 LRMPQ12912 555 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 G2E3Q7L622 706 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
CSMD1-212ENST00000523387 GPS2Q13227 327 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 DNAJC25Q9H1X3 360 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 TIGD1Q96MW7 591 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 CALCOCO1Q9P1Z2 691 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 CFAP74Q9C0B2 1584 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 FAM173BQ6P4H8 233 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 RIMS2Q9UQ26 1411 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 IL13P35225 146 aa10.67□□□□□ -0.7
CSMD1-212ENST00000523387 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
CSMD1-212ENST00000523387 CCDC9Q9Y3X0 531 aaKnown RBP10.67□□□□□ -0.7
CSMD1-212ENST00000523387 SKILP12757 684 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 ATP8B2P98198 1209 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 GABPB1Q06547 395 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-212ENST00000523387 TXNDC2Q86VQ3 553 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 DDX11Q96FC9 970 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 TCEANC2Q96MN5 208 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 KIF24Q5T7B8 1368 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 GLRX3O76003 335 aaKnown RBP10.66□□□□□ -0.7
CSMD1-212ENST00000523387 ANKRD1Q15327 319 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 ZNF397Q8NF99 534 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-212ENST00000523387 SNX14Q9Y5W7 946 aa10.66□□□□□ -0.7
CSMD1-212ENST00000523387 G3BP1Q13283 466 aaKnown RBP eCLIP10.65□□□□□ -0.7
CSMD1-212ENST00000523387 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 RGS12O14924 1447 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 HSPA4P34932 840 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 NGDNQ8NEJ9 315 aaKnown RBP10.65□□□□□ -0.7
CSMD1-212ENST00000523387 RHPN1Q8TCX5 695 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 CBX8Q9HC52 389 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 CCDC171Q6TFL3 1326 aa10.65□□□□□ -0.7
CSMD1-212ENST00000523387 VGLL3A8MV65 326 aa10.65□□□□□ -0.71
CSMD1-212ENST00000523387 POLR3GO15318 223 aaPredicted RBP10.65□□□□□ -0.71
CSMD1-212ENST00000523387 GTF2F1P35269 517 aaKnown RBP eCLIP10.65□□□□□ -0.71
CSMD1-212ENST00000523387 ME1P48163 572 aa10.65□□□□□ -0.71
CSMD1-212ENST00000523387 PDE4CQ08493 712 aa10.65□□□□□ -0.71
CSMD1-212ENST00000523387 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.71
CSMD1-212ENST00000523387 NOL10Q9BSC4 688 aaKnown RBP10.65□□□□□ -0.71
CSMD1-212ENST00000523387 CHMP4AQ9BY43 222 aa10.65□□□□□ -0.71
CSMD1-212ENST00000523387 SPTLC3Q9NUV7 552 aa10.65□□□□□ -0.71
CSMD1-212ENST00000523387 NEMFO60524 1076 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 UBXN4Q92575 508 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 CFAP65Q6ZU64 1925 aaKnown RBP10.64□□□□□ -0.71
CSMD1-212ENST00000523387 MAP3K4Q9Y6R4 1608 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 ZNF853P0CG23 659 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
CSMD1-212ENST00000523387 UNC5CLQ8IV45 518 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
CSMD1-212ENST00000523387 KIF2AO00139 706 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-212ENST00000523387 ZNF75DP51815 510 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 AACSQ86V21 672 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 FAM177A1Q8N128 213 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-212ENST00000523387 CEP152O94986 1710 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 RAD50Q92878 1312 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 CHL1O00533 1208 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 BMS1Q14692 1282 aaKnown RBP10.63□□□□□ -0.71
CSMD1-212ENST00000523387 NRBP1Q9UHY1 535 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 NPHP3Q7Z494 1330 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 SGSM2O43147 1006 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 LIG1P18858 919 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 ZSCAN25Q6NSZ9 544 aa10.63□□□□□ -0.71
CSMD1-212ENST00000523387 HIP1O00291 1037 aa10.62□□□□□ -0.71
CSMD1-212ENST00000523387 SLU7O95391 586 aaKnown RBP10.62□□□□□ -0.71
CSMD1-212ENST00000523387 HDGFP51858 240 aaKnown RBP10.62□□□□□ -0.71
CSMD1-212ENST00000523387 SNW1Q13573 536 aaKnown RBP10.62□□□□□ -0.71
CSMD1-212ENST00000523387 PIK3R4Q99570 1358 aa10.62□□□□□ -0.71
CSMD1-212ENST00000523387 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
CSMD1-212ENST00000523387 SFPQP23246 707 aaKnown RBP eCLIP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms