RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-223ENST00000522746 ATP8B2P98198 1209 aa20.7■□□□□ 0.91
FAM49B-223ENST00000522746 MRC1P22897 1456 aa20.7■□□□□ 0.91
FAM49B-223ENST00000522746 PARP4Q9UKK3 1724 aaKnown RBP20.7■□□□□ 0.9
FAM49B-223ENST00000522746 ZCRB1Q8TBF4 217 aaKnown RBP20.69■□□□□ 0.9
FAM49B-223ENST00000522746 EXOC6BQ9Y2D4 811 aa20.69■□□□□ 0.9
FAM49B-223ENST00000522746 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
FAM49B-223ENST00000522746 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
FAM49B-223ENST00000522746 IL2RBP14784 551 aa20.68■□□□□ 0.9
FAM49B-223ENST00000522746 DDX54Q8TDD1 881 aaKnown RBP20.68■□□□□ 0.9
FAM49B-223ENST00000522746 ADAMTS2O95450 1211 aa20.68■□□□□ 0.9
FAM49B-223ENST00000522746 NBR1Q14596 966 aa20.68■□□□□ 0.9
FAM49B-223ENST00000522746 PDIA6Q15084 440 aa20.68■□□□□ 0.9
FAM49B-223ENST00000522746 ZNF496Q96IT1 587 aaPredicted RBP20.68■□□□□ 0.9
FAM49B-223ENST00000522746 MAP3K2Q9Y2U5 619 aa20.68■□□□□ 0.9
FAM49B-223ENST00000522746 PHLPP1O60346 1717 aa20.67■□□□□ 0.9
FAM49B-223ENST00000522746 HSP90AB1P08238 724 aaKnown RBP20.67■□□□□ 0.9
FAM49B-223ENST00000522746 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
FAM49B-223ENST00000522746 TTC22Q5TAA0 569 aa20.67■□□□□ 0.9
FAM49B-223ENST00000522746 DDX21Q9NR30 783 aaKnown RBP eCLIP20.66■□□□□ 0.9
FAM49B-223ENST00000522746 HYPKQ9NX55 129 aa20.66■□□□□ 0.9
FAM49B-223ENST00000522746 TBC1D9Q6ZT07 1266 aa20.66■□□□□ 0.9
FAM49B-223ENST00000522746 COL22A1Q8NFW1 1626 aaPredicted RBP20.66■□□□□ 0.9
FAM49B-223ENST00000522746 CABP4P57796 275 aa20.65■□□□□ 0.9
FAM49B-223ENST00000522746 KSR2Q6VAB6 950 aa20.65■□□□□ 0.9
FAM49B-223ENST00000522746 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
FAM49B-223ENST00000522746 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
FAM49B-223ENST00000522746 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.89
FAM49B-223ENST00000522746 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.89
FAM49B-223ENST00000522746 AIMP1Q12904 312 aaKnown RBP20.64■□□□□ 0.89
FAM49B-223ENST00000522746 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
FAM49B-223ENST00000522746 TTC5Q8N0Z6 440 aa20.64■□□□□ 0.89
FAM49B-223ENST00000522746 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
FAM49B-223ENST00000522746 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
FAM49B-223ENST00000522746 COL14A1Q05707 1796 aaKnown RBP20.62■□□□□ 0.89
FAM49B-223ENST00000522746 CDC45O75419 566 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 MYL6BP14649 208 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 PPP1R42Q7Z4L9 355 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 SSH3Q8TE77 659 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 TOM1O60784 492 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 LRRCC1Q9C099 1032 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
FAM49B-223ENST00000522746 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
FAM49B-223ENST00000522746 BECN1Q14457 450 aa20.61■□□□□ 0.89
FAM49B-223ENST00000522746 CWF19L2Q2TBE0 894 aaKnown RBP20.61■□□□□ 0.89
FAM49B-223ENST00000522746 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
FAM49B-223ENST00000522746 FMNL2Q96PY5 1086 aa20.61■□□□□ 0.89
FAM49B-223ENST00000522746 GLI3P10071 1580 aa20.6■□□□□ 0.89
FAM49B-223ENST00000522746 ALDH1L1O75891 902 aa20.6■□□□□ 0.89
FAM49B-223ENST00000522746 POLA2Q14181 598 aa20.6■□□□□ 0.89
FAM49B-223ENST00000522746 DDX58O95786 925 aaKnown RBP20.59■□□□□ 0.89
FAM49B-223ENST00000522746 SDSP20132 328 aa20.59■□□□□ 0.89
FAM49B-223ENST00000522746 RBM25P49756 843 aaKnown RBP20.59■□□□□ 0.89
FAM49B-223ENST00000522746 PDE1AP54750 535 aa20.59■□□□□ 0.89
FAM49B-223ENST00000522746 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.89
FAM49B-223ENST00000522746 SRGAP3O43295 1099 aa20.58■□□□□ 0.89
FAM49B-223ENST00000522746 XAGE3Q8WTP9 111 aa20.58■□□□□ 0.89
FAM49B-223ENST00000522746 TBC1D2Q9BYX2 928 aa20.58■□□□□ 0.89
FAM49B-223ENST00000522746 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
FAM49B-223ENST00000522746 OSBPL3Q9H4L5 887 aa20.58■□□□□ 0.88
FAM49B-223ENST00000522746 TSHZ3Q63HK5 1081 aa20.57■□□□□ 0.88
FAM49B-223ENST00000522746 COPS6Q7L5N1 327 aa20.57■□□□□ 0.88
FAM49B-223ENST00000522746 LRP10Q7Z4F1 713 aa20.57■□□□□ 0.88
FAM49B-223ENST00000522746 RIC3Q7Z5B4 369 aa20.57■□□□□ 0.88
FAM49B-223ENST00000522746 LINS1Q8NG48 757 aa20.57■□□□□ 0.88
FAM49B-223ENST00000522746 SURF6O75683 361 aaKnown RBP20.56■□□□□ 0.88
FAM49B-223ENST00000522746 NKX1-1Q15270 411 aaPredicted RBP20.56■□□□□ 0.88
FAM49B-223ENST00000522746 PLCH1Q4KWH8 1693 aa20.55■□□□□ 0.88
FAM49B-223ENST00000522746 ERVV-2B6SEH9 535 aa20.55■□□□□ 0.88
FAM49B-223ENST00000522746 LAMB4A4D0S4 1761 aa20.55■□□□□ 0.88
FAM49B-223ENST00000522746 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
FAM49B-223ENST00000522746 TOGARAM1Q9Y4F4 1720 aa20.55■□□□□ 0.88
FAM49B-223ENST00000522746 DISP2A7MBM2 1401 aa20.54■□□□□ 0.88
FAM49B-223ENST00000522746 IGKV5-2P06315 115 aa20.54■□□□□ 0.88
FAM49B-223ENST00000522746 MX1P20591 662 aa20.54■□□□□ 0.88
FAM49B-223ENST00000522746 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
FAM49B-223ENST00000522746 GRM8O00222 908 aa20.53■□□□□ 0.88
FAM49B-223ENST00000522746 RAB11FIP3O75154 756 aa20.53■□□□□ 0.88
FAM49B-223ENST00000522746 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.88
FAM49B-223ENST00000522746 MTX1Q13505 466 aa20.52■□□□□ 0.88
FAM49B-223ENST00000522746 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
FAM49B-223ENST00000522746 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
FAM49B-223ENST00000522746 KCPQ6ZWJ8 1503 aa20.52■□□□□ 0.87
FAM49B-223ENST00000522746 UTYO14607 1347 aa20.52■□□□□ 0.87
FAM49B-223ENST00000522746 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 SUCLG2Q96I99 432 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 KIF2CQ99661 725 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 MYD88Q99836 296 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 METTL22Q9BUU2 404 aaPredicted RBP20.51■□□□□ 0.87
FAM49B-223ENST00000522746 NEURL1BA8MQ27 555 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 NEXNQ0ZGT2 675 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 KAZALD1Q96I82 304 aa20.51■□□□□ 0.87
FAM49B-223ENST00000522746 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
FAM49B-223ENST00000522746 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
FAM49B-223ENST00000522746 SLKQ9H2G2 1235 aaPredicted RBP20.49■□□□□ 0.87
FAM49B-223ENST00000522746 NRAPQ86VF7 1730 aa20.49■□□□□ 0.87
FAM49B-223ENST00000522746 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
FAM49B-223ENST00000522746 NBPF26B4DH59 902 aa20.48■□□□□ 0.87
FAM49B-223ENST00000522746 NBPF14Q5TI25 921 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms