RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PDRG1Q9NUG6 133 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 GCP02774 474 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 DZIP1Q86YF9 867 aaKnown RBP19.05■□□□□ 0.64
USP42-207ENST00000521713 CCDC191Q8NCU4 936 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 NOL7Q9UMY1 257 aaKnown RBP19.05■□□□□ 0.64
USP42-207ENST00000521713 FAM83GA6ND36 823 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 ANKRD13DQ6ZTN6 518 aa19.05■□□□□ 0.64
USP42-207ENST00000521713 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
USP42-207ENST00000521713 YTHDC2Q9H6S0 1430 aaKnown RBP19.04■□□□□ 0.64
USP42-207ENST00000521713 TSPYL1Q9H0U9 437 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 ATP7AQ04656 1500 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 PI4KAP2A4QPH2 592 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 USP5P45974 858 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 PI4KAP1Q8N8J0 262 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 CCDC112Q8NEF3 446 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 WDR33Q9C0J8 1336 aaKnown RBP19.04■□□□□ 0.64
USP42-207ENST00000521713 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
USP42-207ENST00000521713 UBE2Q2Q8WVN8 375 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
USP42-207ENST00000521713 TRIM27P14373 513 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 WASF1Q92558 559 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 EPS15P42566 896 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 STK3Q13188 491 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 LDHAL6AQ6ZMR3 332 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 PRPF40AO75400 957 aaKnown RBP19.03■□□□□ 0.64
USP42-207ENST00000521713 PDCL3Q9H2J4 239 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 CFAP43Q8NDM7 1665 aa19.03■□□□□ 0.64
USP42-207ENST00000521713 K7ELQ4 463 aaPredicted RBP19.02■□□□□ 0.64
USP42-207ENST00000521713 FBLN1P23142 703 aa19.02■□□□□ 0.64
USP42-207ENST00000521713 PRM3Q9NNZ6 103 aa19.02■□□□□ 0.64
USP42-207ENST00000521713 USP8P40818 1118 aa19.02■□□□□ 0.64
USP42-207ENST00000521713 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
USP42-207ENST00000521713 POLR3DP05423 398 aaPredicted RBP19.02■□□□□ 0.63
USP42-207ENST00000521713 KRT18P05783 430 aaKnown RBP19.02■□□□□ 0.63
USP42-207ENST00000521713 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.63
USP42-207ENST00000521713 LARP1BQ659C4 914 aaKnown RBP19.01■□□□□ 0.63
USP42-207ENST00000521713 NAPBQ9H115 298 aa19.01■□□□□ 0.63
USP42-207ENST00000521713 UBE3BQ7Z3V4 1068 aa19.01■□□□□ 0.63
USP42-207ENST00000521713 ABCC1P33527 1531 aa19.01■□□□□ 0.63
USP42-207ENST00000521713 ARHGEF12Q9NZN5 1544 aa19.01■□□□□ 0.63
USP42-207ENST00000521713 C6orf229H3BNL8 230 aa19.01■□□□□ 0.63
USP42-207ENST00000521713 CRACR2BQ8N4Y2 399 aaPredicted RBP19.01■□□□□ 0.63
USP42-207ENST00000521713 LDHCP07864 332 aa19■□□□□ 0.63
USP42-207ENST00000521713 OFD1O75665 1012 aa19■□□□□ 0.63
USP42-207ENST00000521713 CABLES1Q8TDN4 633 aa19■□□□□ 0.63
USP42-207ENST00000521713 TESK2Q96S53 571 aa19■□□□□ 0.63
USP42-207ENST00000521713 POLR3AO14802 1390 aaPredicted RBP19■□□□□ 0.63
USP42-207ENST00000521713 ATP5J2-PTCD1G3V325 749 aa19■□□□□ 0.63
USP42-207ENST00000521713 CCDC192P0DO97 292 aa19■□□□□ 0.63
USP42-207ENST00000521713 FIBPO43427 364 aa19■□□□□ 0.63
USP42-207ENST00000521713 KRT85P78386 507 aa19■□□□□ 0.63
USP42-207ENST00000521713 MKNK2Q9HBH9 465 aa19■□□□□ 0.63
USP42-207ENST00000521713 NBPF6Q5VWK0 638 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 WWC2Q6AWC2 1192 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
USP42-207ENST00000521713 NBPF4Q96M43 638 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 CCDC8Q9H0W5 538 aaPredicted RBP18.99■□□□□ 0.63
USP42-207ENST00000521713 ST5P78524 1137 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 ECHDC1Q9NTX5 307 aa18.99■□□□□ 0.63
USP42-207ENST00000521713 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
USP42-207ENST00000521713 TTF1Q15361 905 aaPredicted RBP18.98■□□□□ 0.63
USP42-207ENST00000521713 ZFYVE9O95405 1425 aa18.98■□□□□ 0.63
USP42-207ENST00000521713 TMEM132AQ24JP5 1023 aa18.98■□□□□ 0.63
USP42-207ENST00000521713 CCDC152Q4G0S7 254 aa18.98■□□□□ 0.63
USP42-207ENST00000521713 IP6K1Q92551 441 aa18.98■□□□□ 0.63
USP42-207ENST00000521713 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
USP42-207ENST00000521713 CDCA7Q9BWT1 371 aaPredicted RBP18.98■□□□□ 0.63
USP42-207ENST00000521713 RNF41Q9H4P4 317 aaPredicted RBP18.98■□□□□ 0.63
USP42-207ENST00000521713 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
USP42-207ENST00000521713 WDHD1O75717 1129 aaPredicted RBP18.97■□□□□ 0.63
USP42-207ENST00000521713 EIF3JO75822 258 aaKnown RBP18.97■□□□□ 0.63
USP42-207ENST00000521713 DCAF5Q96JK2 942 aa18.97■□□□□ 0.63
USP42-207ENST00000521713 CCDC196A0A1B0GTZ2 297 aa18.97■□□□□ 0.63
USP42-207ENST00000521713 ALDH1L1O75891 902 aa18.97■□□□□ 0.63
USP42-207ENST00000521713 MINDY4BA8MYZ0 360 aa18.97■□□□□ 0.63
USP42-207ENST00000521713 PATL2C9JE40 543 aaKnown RBP18.96■□□□□ 0.63
USP42-207ENST00000521713 HMGB1P09429 215 aaKnown RBP18.96■□□□□ 0.63
USP42-207ENST00000521713 ZRANB1Q9UGI0 708 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 FILIP1LQ4L180 1135 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 CT47A1Q5JQC4 288 aaPredicted RBP18.96■□□□□ 0.63
USP42-207ENST00000521713 XAGE3Q8WTP9 111 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 ERLIN1O75477 346 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 ACSBG1Q96GR2 724 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 SETDB2Q96T68 719 aa18.96■□□□□ 0.63
USP42-207ENST00000521713 ME1P48163 572 aa18.95■□□□□ 0.62
USP42-207ENST00000521713 CFAP45Q9UL16 551 aa18.95■□□□□ 0.62
USP42-207ENST00000521713 CEBPZQ03701 1054 aaKnown RBP18.95■□□□□ 0.62
USP42-207ENST00000521713 SPTY2D1Q68D10 685 aaPredicted RBP18.95■□□□□ 0.62
USP42-207ENST00000521713 EVI5LQ96CN4 794 aa18.95■□□□□ 0.62
USP42-207ENST00000521713 COPS6Q7L5N1 327 aa18.95■□□□□ 0.62
USP42-207ENST00000521713 IQCA1Q86XH1 822 aa18.95■□□□□ 0.62
USP42-207ENST00000521713 MPHOSPH10O00566 681 aaKnown RBP18.95■□□□□ 0.62
USP42-207ENST00000521713 MAGEC2Q9UBF1 373 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms