RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
SMIM12-206ENST00000521580 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
SMIM12-206ENST00000521580 MEGF6O75095 1541 aa17.24■□□□□ 0.35
SMIM12-206ENST00000521580 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
SMIM12-206ENST00000521580 SNX21Q969T3 373 aa17.24■□□□□ 0.35
SMIM12-206ENST00000521580 ZNF335Q9H4Z2 1342 aaPredicted RBP17.24■□□□□ 0.35
SMIM12-206ENST00000521580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMIM12-206ENST00000521580 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
SMIM12-206ENST00000521580 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
SMIM12-206ENST00000521580 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
SMIM12-206ENST00000521580 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
SMIM12-206ENST00000521580 CAMTA1Q9Y6Y1 1673 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 MYL6BP14649 208 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
SMIM12-206ENST00000521580 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMIM12-206ENST00000521580 CYP27B1O15528 508 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
SMIM12-206ENST00000521580 KDM6AO15550 1401 aaPredicted RBP17.22■□□□□ 0.35
SMIM12-206ENST00000521580 USP26Q9BXU7 913 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 CHMP5Q9NZZ3 219 aa17.22■□□□□ 0.35
SMIM12-206ENST00000521580 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
SMIM12-206ENST00000521580 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
SMIM12-206ENST00000521580 TOM1L2Q6ZVM7 507 aa17.21■□□□□ 0.35
SMIM12-206ENST00000521580 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
SMIM12-206ENST00000521580 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
SMIM12-206ENST00000521580 REC8O95072 547 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 POLA2Q14181 598 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 ALDH1L1O75891 902 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
SMIM12-206ENST00000521580 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 CABP4P57796 275 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
SMIM12-206ENST00000521580 SALL3Q9BXA9 1300 aa17.19■□□□□ 0.34
SMIM12-206ENST00000521580 ERC2O15083 957 aa17.19■□□□□ 0.34
SMIM12-206ENST00000521580 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
SMIM12-206ENST00000521580 CPDO75976 1380 aa17.19■□□□□ 0.34
SMIM12-206ENST00000521580 GSE1Q14687 1217 aa17.19■□□□□ 0.34
SMIM12-206ENST00000521580 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
SMIM12-206ENST00000521580 PDIA6Q15084 440 aa17.18■□□□□ 0.34
SMIM12-206ENST00000521580 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
SMIM12-206ENST00000521580 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
SMIM12-206ENST00000521580 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
SMIM12-206ENST00000521580 RABEP1Q15276 862 aa17.17■□□□□ 0.34
SMIM12-206ENST00000521580 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
SMIM12-206ENST00000521580 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
SMIM12-206ENST00000521580 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
SMIM12-206ENST00000521580 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
SMIM12-206ENST00000521580 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
SMIM12-206ENST00000521580 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
SMIM12-206ENST00000521580 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
SMIM12-206ENST00000521580 COL18A1P39060 1754 aa17.16■□□□□ 0.34
SMIM12-206ENST00000521580 LMTK3Q96Q04 1460 aa17.16■□□□□ 0.34
SMIM12-206ENST00000521580 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
SMIM12-206ENST00000521580 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
SMIM12-206ENST00000521580 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
SMIM12-206ENST00000521580 GRM8O00222 908 aa17.15■□□□□ 0.34
SMIM12-206ENST00000521580 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
SMIM12-206ENST00000521580 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
SMIM12-206ENST00000521580 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
SMIM12-206ENST00000521580 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
SMIM12-206ENST00000521580 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
SMIM12-206ENST00000521580 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
SMIM12-206ENST00000521580 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
SMIM12-206ENST00000521580 N4BP2Q86UW6 1770 aaPredicted RBP17.14■□□□□ 0.33
SMIM12-206ENST00000521580 EVA1CP58658 441 aa17.14■□□□□ 0.33
SMIM12-206ENST00000521580 SUCLG2Q96I99 432 aa17.13■□□□□ 0.33
SMIM12-206ENST00000521580 MYD88Q99836 296 aa17.13■□□□□ 0.33
SMIM12-206ENST00000521580 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
SMIM12-206ENST00000521580 CHMLP26374 656 aa17.13■□□□□ 0.33
SMIM12-206ENST00000521580 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
SMIM12-206ENST00000521580 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
SMIM12-206ENST00000521580 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
SMIM12-206ENST00000521580 MTX1Q13505 466 aa17.12■□□□□ 0.33
SMIM12-206ENST00000521580 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
SMIM12-206ENST00000521580 AOX1Q06278 1338 aa17.12■□□□□ 0.33
SMIM12-206ENST00000521580 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
SMIM12-206ENST00000521580 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
SMIM12-206ENST00000521580 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
SMIM12-206ENST00000521580 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
SMIM12-206ENST00000521580 MCM4P33991 863 aa17.11■□□□□ 0.33
SMIM12-206ENST00000521580 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
SMIM12-206ENST00000521580 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
SMIM12-206ENST00000521580 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
SMIM12-206ENST00000521580 ABCC6O95255 1503 aa17.1■□□□□ 0.33
SMIM12-206ENST00000521580 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
SMIM12-206ENST00000521580 ST18O60284 1047 aa17.1■□□□□ 0.33
SMIM12-206ENST00000521580 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
SMIM12-206ENST00000521580 IL2RBP14784 551 aa17.1■□□□□ 0.33
SMIM12-206ENST00000521580 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
SMIM12-206ENST00000521580 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
SMIM12-206ENST00000521580 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
SMIM12-206ENST00000521580 MCCP23508 829 aa17.09■□□□□ 0.33
SMIM12-206ENST00000521580 PI4K2BQ8TCG2 481 aa17.09■□□□□ 0.33
SMIM12-206ENST00000521580 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
SMIM12-206ENST00000521580 IFIT2P09913 472 aaKnown RBP17.09■□□□□ 0.33
SMIM12-206ENST00000521580 DDIT3P35638 169 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms