RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 BRCA1P38398 1863 aaKnown RBP11.57□□□□□ -0.56
SPARC-204ENST00000521569 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
SPARC-204ENST00000521569 LMNB1P20700 586 aa11.57□□□□□ -0.56
SPARC-204ENST00000521569 CHRNA5P30532 468 aa11.57□□□□□ -0.56
SPARC-204ENST00000521569 EIF5P55010 431 aaKnown RBP11.57□□□□□ -0.56
SPARC-204ENST00000521569 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
SPARC-204ENST00000521569 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
SPARC-204ENST00000521569 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
SPARC-204ENST00000521569 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
SPARC-204ENST00000521569 COL15A1P39059 1388 aa11.56□□□□□ -0.56
SPARC-204ENST00000521569 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
SPARC-204ENST00000521569 A0A087WZG4 1122 aa11.56□□□□□ -0.56
SPARC-204ENST00000521569 STARD3NLO95772 234 aa11.56□□□□□ -0.56
SPARC-204ENST00000521569 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
SPARC-204ENST00000521569 SMC1BQ8NDV3 1235 aa11.56□□□□□ -0.56
SPARC-204ENST00000521569 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
SPARC-204ENST00000521569 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
SPARC-204ENST00000521569 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 PCNTO95613 3336 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
SPARC-204ENST00000521569 SERPINB2P05120 415 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
SPARC-204ENST00000521569 SLC39A6Q13433 755 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 RRAGCQ9HB90 399 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 TJP1Q07157 1748 aa11.55□□□□□ -0.56
SPARC-204ENST00000521569 RGL2O15211 777 aa11.54□□□□□ -0.56
SPARC-204ENST00000521569 NRXN2Q9P2S2 1712 aa11.54□□□□□ -0.56
SPARC-204ENST00000521569 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
SPARC-204ENST00000521569 H0YIN7 160 aa11.53□□□□□ -0.56
SPARC-204ENST00000521569 PRELPP51888 382 aa11.53□□□□□ -0.56
SPARC-204ENST00000521569 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
SPARC-204ENST00000521569 LTBP3Q9NS15 1303 aa11.53□□□□□ -0.56
SPARC-204ENST00000521569 CEMIPQ8WUJ3 1361 aa11.53□□□□□ -0.56
SPARC-204ENST00000521569 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
SPARC-204ENST00000521569 NFKBIEO00221 500 aa11.52□□□□□ -0.57
SPARC-204ENST00000521569 PDE6BP35913 854 aa11.52□□□□□ -0.57
SPARC-204ENST00000521569 IL6STP40189 918 aaPredicted RBP11.52□□□□□ -0.57
SPARC-204ENST00000521569 IL17REQ8NFR9 667 aa11.52□□□□□ -0.57
SPARC-204ENST00000521569 GAS2L2Q8NHY3 880 aa11.52□□□□□ -0.57
SPARC-204ENST00000521569 POTECB2RU33 542 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 HMOX1P09601 288 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 CLEC4GQ6UXB4 293 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 TTC5Q8N0Z6 440 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 ZNF496Q96IT1 587 aaPredicted RBP11.51□□□□□ -0.57
SPARC-204ENST00000521569 PCGF6Q9BYE7 350 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 HEG1Q9ULI3 1381 aa11.51□□□□□ -0.57
SPARC-204ENST00000521569 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
SPARC-204ENST00000521569 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
SPARC-204ENST00000521569 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
SPARC-204ENST00000521569 CARMIL3Q8ND23 1372 aa11.5□□□□□ -0.57
SPARC-204ENST00000521569 CAMTA2O94983 1202 aa11.49□□□□□ -0.57
SPARC-204ENST00000521569 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
SPARC-204ENST00000521569 RASSF7Q02833 373 aa11.49□□□□□ -0.57
SPARC-204ENST00000521569 SOGA3Q5TF21 947 aa11.49□□□□□ -0.57
SPARC-204ENST00000521569 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
SPARC-204ENST00000521569 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
SPARC-204ENST00000521569 FMNL2Q96PY5 1086 aa11.49□□□□□ -0.57
SPARC-204ENST00000521569 COL3A1P02461 1466 aaPredicted RBP11.49□□□□□ -0.57
SPARC-204ENST00000521569 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
SPARC-204ENST00000521569 TEFQ10587 303 aa11.48□□□□□ -0.57
SPARC-204ENST00000521569 PRR5LQ6MZQ0 368 aa11.48□□□□□ -0.57
SPARC-204ENST00000521569 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
SPARC-204ENST00000521569 CNKSR1Q969H4 720 aa11.48□□□□□ -0.57
SPARC-204ENST00000521569 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
SPARC-204ENST00000521569 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
SPARC-204ENST00000521569 SRGNP10124 158 aa11.47□□□□□ -0.57
SPARC-204ENST00000521569 HTRA3P83110 453 aa11.47□□□□□ -0.57
SPARC-204ENST00000521569 COL13A1Q5TAT6 717 aaPredicted RBP11.47□□□□□ -0.57
SPARC-204ENST00000521569 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
SPARC-204ENST00000521569 SBF1O95248 1867 aa11.46□□□□□ -0.57
SPARC-204ENST00000521569 UBR2Q8IWV8 1755 aa11.46□□□□□ -0.57
SPARC-204ENST00000521569 HTATSF1O43719 755 aaKnown RBP11.46□□□□□ -0.57
SPARC-204ENST00000521569 MASTLQ96GX5 879 aa11.46□□□□□ -0.57
SPARC-204ENST00000521569 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
SPARC-204ENST00000521569 CC2D1BQ5T0F9 858 aaKnown RBP11.45□□□□□ -0.58
SPARC-204ENST00000521569 CNBD1Q8NA66 436 aa11.45□□□□□ -0.58
SPARC-204ENST00000521569 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
SPARC-204ENST00000521569 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
SPARC-204ENST00000521569 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
SPARC-204ENST00000521569 C21orf2O43822 256 aa11.44□□□□□ -0.58
SPARC-204ENST00000521569 A1BGP04217 495 aa11.44□□□□□ -0.58
SPARC-204ENST00000521569 ST5P78524 1137 aa11.44□□□□□ -0.58
SPARC-204ENST00000521569 CCER1Q8TC90 406 aaPredicted RBP11.44□□□□□ -0.58
SPARC-204ENST00000521569 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPARC-204ENST00000521569 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
SPARC-204ENST00000521569 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
SPARC-204ENST00000521569 IQCA1LA6NCM1 817 aa11.43□□□□□ -0.58
SPARC-204ENST00000521569 BTBD11A6QL63 1104 aa11.43□□□□□ -0.58
SPARC-204ENST00000521569 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
SPARC-204ENST00000521569 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
SPARC-204ENST00000521569 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
SPARC-204ENST00000521569 BICDL1Q6ZP65 573 aa11.43□□□□□ -0.58
SPARC-204ENST00000521569 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
SPARC-204ENST00000521569 PHACTR3Q96KR7 559 aa11.43□□□□□ -0.58
SPARC-204ENST00000521569 AFDNP55196 1824 aaKnown RBP11.43□□□□□ -0.58
SPARC-204ENST00000521569 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
SPARC-204ENST00000521569 NPR1P16066 1061 aa11.42□□□□□ -0.58
SPARC-204ENST00000521569 DZIP3Q86Y13 1208 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms