RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
PRKDC-204ENST00000521331 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
PRKDC-204ENST00000521331 ZBTB1Q9Y2K1 713 aa20.12■□□□□ 0.81
PRKDC-204ENST00000521331 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
PRKDC-204ENST00000521331 KDM2BQ8NHM5 1336 aa20.11■□□□□ 0.81
PRKDC-204ENST00000521331 NFIXQ14938 502 aa20.11■□□□□ 0.81
PRKDC-204ENST00000521331 CC2D1BQ5T0F9 858 aaKnown RBP20.11■□□□□ 0.81
PRKDC-204ENST00000521331 C16orf71Q8IYS4 520 aaPredicted RBP20.11■□□□□ 0.81
PRKDC-204ENST00000521331 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
PRKDC-204ENST00000521331 RNF181Q9P0P0 153 aa20.11■□□□□ 0.81
PRKDC-204ENST00000521331 ARFGEF1Q9Y6D6 1849 aa20.11■□□□□ 0.81
PRKDC-204ENST00000521331 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
PRKDC-204ENST00000521331 STARD3NLO95772 234 aa20.09■□□□□ 0.81
PRKDC-204ENST00000521331 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
PRKDC-204ENST00000521331 A0A087WZG4 1122 aa20.07■□□□□ 0.8
PRKDC-204ENST00000521331 SERPINB2P05120 415 aa20.07■□□□□ 0.8
PRKDC-204ENST00000521331 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
PRKDC-204ENST00000521331 BCL2L12Q9HB09 334 aa20.07■□□□□ 0.8
PRKDC-204ENST00000521331 ZC3H4Q9UPT8 1303 aaKnown RBP20.06■□□□□ 0.8
PRKDC-204ENST00000521331 CANXP27824 592 aaKnown RBP20.06■□□□□ 0.8
PRKDC-204ENST00000521331 TEFQ10587 303 aa20.06■□□□□ 0.8
PRKDC-204ENST00000521331 FSTL1Q12841 308 aa20.06■□□□□ 0.8
PRKDC-204ENST00000521331 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
PRKDC-204ENST00000521331 U2SURPO15042 1029 aaKnown RBP20.05■□□□□ 0.8
PRKDC-204ENST00000521331 TEX13AQ9BXU3 409 aaPredicted RBP20.05■□□□□ 0.8
PRKDC-204ENST00000521331 EIF5P55010 431 aaKnown RBP20.04■□□□□ 0.8
PRKDC-204ENST00000521331 ZNF790Q6PG37 636 aa20.04■□□□□ 0.8
PRKDC-204ENST00000521331 DNAJC5GQ8N7S2 189 aa20.04■□□□□ 0.8
PRKDC-204ENST00000521331 TTLL6Q8N841 843 aa20.04■□□□□ 0.8
PRKDC-204ENST00000521331 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
PRKDC-204ENST00000521331 ZNF496Q96IT1 587 aaPredicted RBP20.03■□□□□ 0.8
PRKDC-204ENST00000521331 NRXN2Q9P2S2 1712 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 H0YIN7 160 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 LMNB1P20700 586 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 RASSF7Q02833 373 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 C2CD5Q86YS7 1000 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 RRAGCQ9HB90 399 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
PRKDC-204ENST00000521331 UBR2Q8IWV8 1755 aa20.01■□□□□ 0.79
PRKDC-204ENST00000521331 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
PRKDC-204ENST00000521331 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
PRKDC-204ENST00000521331 FMNL2Q96PY5 1086 aa20■□□□□ 0.79
PRKDC-204ENST00000521331 CARMIL3Q8ND23 1372 aa19.99■□□□□ 0.79
PRKDC-204ENST00000521331 IL6STP40189 918 aaPredicted RBP19.99■□□□□ 0.79
PRKDC-204ENST00000521331 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
PRKDC-204ENST00000521331 AFDNP55196 1824 aaKnown RBP19.98■□□□□ 0.79
PRKDC-204ENST00000521331 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
PRKDC-204ENST00000521331 TBC1D9BQ66K14 1250 aa19.98■□□□□ 0.79
PRKDC-204ENST00000521331 SMC1BQ8NDV3 1235 aa19.98■□□□□ 0.79
PRKDC-204ENST00000521331 BRIP1Q9BX63 1249 aa19.98■□□□□ 0.79
PRKDC-204ENST00000521331 CEMIPQ8WUJ3 1361 aa19.97■□□□□ 0.79
PRKDC-204ENST00000521331 GLTPD2A6NH11 291 aa19.97■□□□□ 0.79
PRKDC-204ENST00000521331 PDE6BP35913 854 aa19.97■□□□□ 0.79
PRKDC-204ENST00000521331 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
PRKDC-204ENST00000521331 ZNF330Q9Y3S2 320 aaPredicted RBP19.97■□□□□ 0.79
PRKDC-204ENST00000521331 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
PRKDC-204ENST00000521331 TNRC6CQ9HCJ0 1690 aaKnown RBP19.97■□□□□ 0.79
PRKDC-204ENST00000521331 KLRG1Q96E93 195 aa19.96■□□□□ 0.79
PRKDC-204ENST00000521331 TBC1D2BQ9UPU7 963 aa19.96■□□□□ 0.79
PRKDC-204ENST00000521331 BTBD11A6QL63 1104 aa19.95■□□□□ 0.78
PRKDC-204ENST00000521331 NFKBIEO00221 500 aa19.95■□□□□ 0.78
PRKDC-204ENST00000521331 VEGFAP15692 232 aaPredicted RBP19.95■□□□□ 0.78
PRKDC-204ENST00000521331 PRELPP51888 382 aa19.95■□□□□ 0.78
PRKDC-204ENST00000521331 PRR5LQ6MZQ0 368 aa19.95■□□□□ 0.78
PRKDC-204ENST00000521331 ZNF622Q969S3 477 aaKnown RBP eCLIP19.95■□□□□ 0.78
PRKDC-204ENST00000521331 DLEC1Q9Y238 1755 aa19.95■□□□□ 0.78
PRKDC-204ENST00000521331 SBF1O95248 1867 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 WDR90Q96KV7 1748 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 A1BGP04217 495 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 PRKAR2BP31323 418 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 PHACTR3Q96KR7 559 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 SETDB2Q96T68 719 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
PRKDC-204ENST00000521331 CAMTA2O94983 1202 aa19.93■□□□□ 0.78
PRKDC-204ENST00000521331 HTRA3P83110 453 aa19.93■□□□□ 0.78
PRKDC-204ENST00000521331 SCN7AQ01118 1682 aa19.92■□□□□ 0.78
PRKDC-204ENST00000521331 NPHP1O15259 732 aa19.92■□□□□ 0.78
PRKDC-204ENST00000521331 JMYQ8N9B5 988 aa19.92■□□□□ 0.78
PRKDC-204ENST00000521331 CNBD1Q8NA66 436 aa19.92■□□□□ 0.78
PRKDC-204ENST00000521331 ST5P78524 1137 aa19.91■□□□□ 0.78
PRKDC-204ENST00000521331 DPY19L2Q6NUT2 758 aa19.91■□□□□ 0.78
PRKDC-204ENST00000521331 DZIP3Q86Y13 1208 aaKnown RBP19.91■□□□□ 0.78
PRKDC-204ENST00000521331 SIPA1L3O60292 1781 aaPredicted RBP19.9■□□□□ 0.78
PRKDC-204ENST00000521331 KCNQ3O43525 872 aa19.9■□□□□ 0.78
PRKDC-204ENST00000521331 C21orf2O43822 256 aa19.9■□□□□ 0.78
PRKDC-204ENST00000521331 RTF1Q92541 710 aaKnown RBP19.9■□□□□ 0.78
PRKDC-204ENST00000521331 CNKSR1Q969H4 720 aa19.9■□□□□ 0.78
PRKDC-204ENST00000521331 STYK1Q6J9G0 422 aa19.89■□□□□ 0.77
PRKDC-204ENST00000521331 CLEC4GQ6UXB4 293 aa19.89■□□□□ 0.77
PRKDC-204ENST00000521331 CCDC24Q8N4L8 307 aa19.89■□□□□ 0.77
PRKDC-204ENST00000521331 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
PRKDC-204ENST00000521331 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
PRKDC-204ENST00000521331 U2AF1L5P0DN76 240 aaPredicted RBP19.88■□□□□ 0.77
PRKDC-204ENST00000521331 U2AF1Q01081 240 aaKnown RBP eCLIP19.88■□□□□ 0.77
PRKDC-204ENST00000521331 ERFEQ4G0M1 354 aa19.88■□□□□ 0.77
PRKDC-204ENST00000521331 SOGA3Q5TF21 947 aa19.88■□□□□ 0.77
PRKDC-204ENST00000521331 ZNF219Q9P2Y4 722 aaPredicted RBP19.88■□□□□ 0.77
PRKDC-204ENST00000521331 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms