RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 MTFR1LQ9H019 292 aa13.69□□□□□ -0.22
TRIM35-204ENST00000521283 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
TRIM35-204ENST00000521283 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
TRIM35-204ENST00000521283 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
TRIM35-204ENST00000521283 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
TRIM35-204ENST00000521283 PIGBQ92521 554 aa13.68□□□□□ -0.22
TRIM35-204ENST00000521283 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
TRIM35-204ENST00000521283 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
TRIM35-204ENST00000521283 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
TRIM35-204ENST00000521283 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
TRIM35-204ENST00000521283 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
TRIM35-204ENST00000521283 C5P01031 1676 aa13.66□□□□□ -0.22
TRIM35-204ENST00000521283 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
TRIM35-204ENST00000521283 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
TRIM35-204ENST00000521283 CABP4P57796 275 aa13.65□□□□□ -0.22
TRIM35-204ENST00000521283 AEBP1Q8IUX7 1158 aa13.65□□□□□ -0.22
TRIM35-204ENST00000521283 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
TRIM35-204ENST00000521283 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
TRIM35-204ENST00000521283 ST18O60284 1047 aa13.64□□□□□ -0.23
TRIM35-204ENST00000521283 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
TRIM35-204ENST00000521283 SIK1P57059 783 aa13.64□□□□□ -0.23
TRIM35-204ENST00000521283 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
TRIM35-204ENST00000521283 COL3A1P02461 1466 aaPredicted RBP13.63□□□□□ -0.23
TRIM35-204ENST00000521283 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
TRIM35-204ENST00000521283 RALBP1Q15311 655 aa13.63□□□□□ -0.23
TRIM35-204ENST00000521283 ZNF827Q17R98 1081 aa13.63□□□□□ -0.23
TRIM35-204ENST00000521283 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
TRIM35-204ENST00000521283 FCHSD2O94868 740 aa13.62□□□□□ -0.23
TRIM35-204ENST00000521283 HMOX1P09601 288 aa13.62□□□□□ -0.23
TRIM35-204ENST00000521283 POLD1P28340 1107 aa13.62□□□□□ -0.23
TRIM35-204ENST00000521283 AK7Q96M32 723 aa13.62□□□□□ -0.23
TRIM35-204ENST00000521283 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
TRIM35-204ENST00000521283 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
TRIM35-204ENST00000521283 NEFMP07197 916 aa13.61□□□□□ -0.23
TRIM35-204ENST00000521283 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
TRIM35-204ENST00000521283 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-204ENST00000521283 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
TRIM35-204ENST00000521283 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
TRIM35-204ENST00000521283 RGL2O15211 777 aa13.6□□□□□ -0.23
TRIM35-204ENST00000521283 KDM6AO15550 1401 aaPredicted RBP13.6□□□□□ -0.23
TRIM35-204ENST00000521283 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
TRIM35-204ENST00000521283 SSFA2P28290 1259 aa13.6□□□□□ -0.23
TRIM35-204ENST00000521283 COL24A1Q17RW2 1714 aa13.6□□□□□ -0.23
TRIM35-204ENST00000521283 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
TRIM35-204ENST00000521283 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
TRIM35-204ENST00000521283 ASAP1Q9ULH1 1129 aa13.6□□□□□ -0.23
TRIM35-204ENST00000521283 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
TRIM35-204ENST00000521283 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
TRIM35-204ENST00000521283 PTGER2P43116 358 aa13.59□□□□□ -0.23
TRIM35-204ENST00000521283 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
TRIM35-204ENST00000521283 RC3H1Q5TC82 1133 aaKnown RBP13.59□□□□□ -0.23
TRIM35-204ENST00000521283 MS4A4AQ96JQ5 239 aa13.59□□□□□ -0.23
TRIM35-204ENST00000521283 SLC52A2Q9HAB3 445 aa13.59□□□□□ -0.23
TRIM35-204ENST00000521283 TUBGCP6Q96RT7 1819 aa13.59□□□□□ -0.23
TRIM35-204ENST00000521283 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
TRIM35-204ENST00000521283 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-204ENST00000521283 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRIM35-204ENST00000521283 ARXQ96QS3 562 aa13.58□□□□□ -0.24
TRIM35-204ENST00000521283 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
TRIM35-204ENST00000521283 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
TRIM35-204ENST00000521283 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
TRIM35-204ENST00000521283 MRC1P22897 1456 aa13.57□□□□□ -0.24
TRIM35-204ENST00000521283 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
TRIM35-204ENST00000521283 KCNQ4P56696 695 aa13.57□□□□□ -0.24
TRIM35-204ENST00000521283 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
TRIM35-204ENST00000521283 CICQ96RK0 1608 aaPredicted RBP13.57□□□□□ -0.24
TRIM35-204ENST00000521283 COL23A1Q86Y22 540 aaPredicted RBP13.56□□□□□ -0.24
TRIM35-204ENST00000521283 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
TRIM35-204ENST00000521283 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
TRIM35-204ENST00000521283 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
TRIM35-204ENST00000521283 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
TRIM35-204ENST00000521283 SNPHO15079 494 aa13.55□□□□□ -0.24
TRIM35-204ENST00000521283 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
TRIM35-204ENST00000521283 TEFQ10587 303 aa13.55□□□□□ -0.24
TRIM35-204ENST00000521283 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
TRIM35-204ENST00000521283 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
TRIM35-204ENST00000521283 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
TRIM35-204ENST00000521283 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
TRIM35-204ENST00000521283 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
TRIM35-204ENST00000521283 G3V3G9 751 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 TRAPPC3LQ5T215 181 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 TTC5Q8N0Z6 440 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
TRIM35-204ENST00000521283 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
TRIM35-204ENST00000521283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
TRIM35-204ENST00000521283 GNPATO15228 680 aa13.53□□□□□ -0.24
TRIM35-204ENST00000521283 ITPK1Q13572 414 aa13.53□□□□□ -0.24
TRIM35-204ENST00000521283 MYBBP1AQ9BQG0 1328 aaKnown RBP13.53□□□□□ -0.24
TRIM35-204ENST00000521283 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.25
TRIM35-204ENST00000521283 RPS6KA4O75676 772 aa13.52□□□□□ -0.25
TRIM35-204ENST00000521283 SYT17Q9BSW7 474 aa13.52□□□□□ -0.25
TRIM35-204ENST00000521283 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.25
TRIM35-204ENST00000521283 NLGN1Q8N2Q7 840 aa13.51□□□□□ -0.25
TRIM35-204ENST00000521283 FHDC1Q9C0D6 1143 aaPredicted RBP13.51□□□□□ -0.25
TRIM35-204ENST00000521283 STK25O00506 426 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 STARD3NLO95772 234 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 RFC4P35249 363 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms