RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 HTRA3P83110 453 aa22.34■■□□□ 1.17
TRAM1-204ENST00000521049 SLC39A6Q13433 755 aa22.34■■□□□ 1.17
TRAM1-204ENST00000521049 VSIG10Q8N0Z9 540 aa22.34■■□□□ 1.17
TRAM1-204ENST00000521049 SMC1BQ8NDV3 1235 aa22.33■■□□□ 1.17
TRAM1-204ENST00000521049 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
TRAM1-204ENST00000521049 SERPINB2P05120 415 aa22.32■■□□□ 1.16
TRAM1-204ENST00000521049 LMNB1P20700 586 aa22.32■■□□□ 1.16
TRAM1-204ENST00000521049 TJP1Q07157 1748 aa22.31■■□□□ 1.16
TRAM1-204ENST00000521049 AMER1Q5JTC6 1135 aaPredicted RBP22.31■■□□□ 1.16
TRAM1-204ENST00000521049 TTLL6Q8N841 843 aa22.31■■□□□ 1.16
TRAM1-204ENST00000521049 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
TRAM1-204ENST00000521049 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
TRAM1-204ENST00000521049 GLTPD2A6NH11 291 aa22.3■■□□□ 1.16
TRAM1-204ENST00000521049 COL15A1P39059 1388 aa22.29■■□□□ 1.16
TRAM1-204ENST00000521049 HMOX1P09601 288 aa22.29■■□□□ 1.16
TRAM1-204ENST00000521049 VEGFAP15692 232 aaPredicted RBP22.29■■□□□ 1.16
TRAM1-204ENST00000521049 RASSF7Q02833 373 aa22.29■■□□□ 1.16
TRAM1-204ENST00000521049 MTHFSDQ2M296 383 aaKnown RBP22.29■■□□□ 1.16
TRAM1-204ENST00000521049 ADAMTS7Q9UKP4 1686 aa22.29■■□□□ 1.16
TRAM1-204ENST00000521049 H0YIN7 160 aa22.28■■□□□ 1.16
TRAM1-204ENST00000521049 PRELPP51888 382 aa22.27■■□□□ 1.16
TRAM1-204ENST00000521049 C2CD5Q86YS7 1000 aa22.27■■□□□ 1.16
TRAM1-204ENST00000521049 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
TRAM1-204ENST00000521049 SCN11AQ9UI33 1791 aa22.27■■□□□ 1.16
TRAM1-204ENST00000521049 A0A087WZG4 1122 aa22.26■■□□□ 1.15
TRAM1-204ENST00000521049 STARD3NLO95772 234 aa22.26■■□□□ 1.15
TRAM1-204ENST00000521049 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
TRAM1-204ENST00000521049 EIF5P55010 431 aaKnown RBP22.26■■□□□ 1.15
TRAM1-204ENST00000521049 COL13A1Q5TAT6 717 aaPredicted RBP22.26■■□□□ 1.15
TRAM1-204ENST00000521049 MRC1P22897 1456 aa22.26■■□□□ 1.15
TRAM1-204ENST00000521049 PDZRN3Q9UPQ7 1066 aa22.25■■□□□ 1.15
TRAM1-204ENST00000521049 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
TRAM1-204ENST00000521049 TTC5Q8N0Z6 440 aa22.23■■□□□ 1.15
TRAM1-204ENST00000521049 TEX13AQ9BXU3 409 aaPredicted RBP22.23■■□□□ 1.15
TRAM1-204ENST00000521049 SBF1O95248 1867 aa22.22■■□□□ 1.15
TRAM1-204ENST00000521049 NFKBIEO00221 500 aa22.22■■□□□ 1.15
TRAM1-204ENST00000521049 DPY19L2Q6NUT2 758 aa22.22■■□□□ 1.15
TRAM1-204ENST00000521049 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
TRAM1-204ENST00000521049 BRIP1Q9BX63 1249 aa22.22■■□□□ 1.15
TRAM1-204ENST00000521049 TNRC6CQ9HCJ0 1690 aaKnown RBP22.2■■□□□ 1.15
TRAM1-204ENST00000521049 NRXN2Q9P2S2 1712 aa22.2■■□□□ 1.14
TRAM1-204ENST00000521049 PER1O15534 1290 aaPredicted RBP22.2■■□□□ 1.14
TRAM1-204ENST00000521049 PDE6BP35913 854 aa22.2■■□□□ 1.14
TRAM1-204ENST00000521049 POTECB2RU33 542 aa22.19■■□□□ 1.14
TRAM1-204ENST00000521049 TBC1D9BQ66K14 1250 aa22.19■■□□□ 1.14
TRAM1-204ENST00000521049 ZNF496Q96IT1 587 aaPredicted RBP22.19■■□□□ 1.14
TRAM1-204ENST00000521049 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
TRAM1-204ENST00000521049 ZNF790Q6PG37 636 aa22.18■■□□□ 1.14
TRAM1-204ENST00000521049 IL17REQ8NFR9 667 aa22.18■■□□□ 1.14
TRAM1-204ENST00000521049 ZNF622Q969S3 477 aaKnown RBP eCLIP22.18■■□□□ 1.14
TRAM1-204ENST00000521049 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
TRAM1-204ENST00000521049 TEFQ10587 303 aa22.17■■□□□ 1.14
TRAM1-204ENST00000521049 HEG1Q9ULI3 1381 aa22.16■■□□□ 1.14
TRAM1-204ENST00000521049 KIF7Q2M1P5 1343 aa22.16■■□□□ 1.14
TRAM1-204ENST00000521049 AFDNP55196 1824 aaKnown RBP22.16■■□□□ 1.14
TRAM1-204ENST00000521049 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
TRAM1-204ENST00000521049 PRR5LQ6MZQ0 368 aa22.16■■□□□ 1.14
TRAM1-204ENST00000521049 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
TRAM1-204ENST00000521049 C21orf2O43822 256 aa22.15■■□□□ 1.14
TRAM1-204ENST00000521049 ERFEQ4G0M1 354 aa22.15■■□□□ 1.14
TRAM1-204ENST00000521049 TNS4Q8IZW8 715 aa22.15■■□□□ 1.14
TRAM1-204ENST00000521049 GAS2L2Q8NHY3 880 aa22.15■■□□□ 1.14
TRAM1-204ENST00000521049 CC2D1BQ5T0F9 858 aaKnown RBP22.14■■□□□ 1.13
TRAM1-204ENST00000521049 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
TRAM1-204ENST00000521049 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
TRAM1-204ENST00000521049 CNKSR1Q969H4 720 aa22.13■■□□□ 1.13
TRAM1-204ENST00000521049 FMNL2Q96PY5 1086 aa22.13■■□□□ 1.13
TRAM1-204ENST00000521049 SETDB2Q96T68 719 aa22.13■■□□□ 1.13
TRAM1-204ENST00000521049 ZNF219Q9P2Y4 722 aaPredicted RBP22.12■■□□□ 1.13
TRAM1-204ENST00000521049 ZNF330Q9Y3S2 320 aaPredicted RBP22.12■■□□□ 1.13
TRAM1-204ENST00000521049 U2SURPO15042 1029 aaKnown RBP22.11■■□□□ 1.13
TRAM1-204ENST00000521049 HSPA1AP0DMV8 641 aaKnown RBP22.11■■□□□ 1.13
TRAM1-204ENST00000521049 HSPA1BP0DMV9 641 aaKnown RBP22.11■■□□□ 1.13
TRAM1-204ENST00000521049 STYK1Q6J9G0 422 aa22.11■■□□□ 1.13
TRAM1-204ENST00000521049 CCDC24Q8N4L8 307 aa22.11■■□□□ 1.13
TRAM1-204ENST00000521049 DLEC1Q9Y238 1755 aa22.1■■□□□ 1.13
TRAM1-204ENST00000521049 CAMTA2O94983 1202 aa22.1■■□□□ 1.13
TRAM1-204ENST00000521049 A1BGP04217 495 aa22.1■■□□□ 1.13
TRAM1-204ENST00000521049 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
TRAM1-204ENST00000521049 CCER1Q8TC90 406 aaPredicted RBP22.1■■□□□ 1.13
TRAM1-204ENST00000521049 TAOK3Q9H2K8 898 aa22.1■■□□□ 1.13
TRAM1-204ENST00000521049 SRGNP10124 158 aa22.09■■□□□ 1.13
TRAM1-204ENST00000521049 SOGA3Q5TF21 947 aa22.09■■□□□ 1.13
TRAM1-204ENST00000521049 CHADLQ6NUI6 762 aa22.09■■□□□ 1.13
TRAM1-204ENST00000521049 UBR2Q8IWV8 1755 aa22.08■■□□□ 1.13
TRAM1-204ENST00000521049 ST5P78524 1137 aa22.08■■□□□ 1.13
TRAM1-204ENST00000521049 MASTLQ96GX5 879 aa22.08■■□□□ 1.13
TRAM1-204ENST00000521049 NPHP1O15259 732 aa22.07■■□□□ 1.12
TRAM1-204ENST00000521049 CAPN15O75808 1086 aa22.07■■□□□ 1.12
TRAM1-204ENST00000521049 CREBZFQ9NS37 354 aa22.07■■□□□ 1.12
TRAM1-204ENST00000521049 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
TRAM1-204ENST00000521049 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
TRAM1-204ENST00000521049 BTBD11A6QL63 1104 aa22.06■■□□□ 1.12
TRAM1-204ENST00000521049 DDNO94850 711 aaPredicted RBP22.06■■□□□ 1.12
TRAM1-204ENST00000521049 PRPF40BQ6NWY9 871 aaKnown RBP22.06■■□□□ 1.12
TRAM1-204ENST00000521049 CLEC4GQ6UXB4 293 aa22.06■■□□□ 1.12
TRAM1-204ENST00000521049 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
TRAM1-204ENST00000521049 PCNTO95613 3336 aa22.05■■□□□ 1.12
TRAM1-204ENST00000521049 KCNQ3O43525 872 aa22.05■■□□□ 1.12
TRAM1-204ENST00000521049 USP16Q9Y5T5 823 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms