RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 DDR1Q08345 913 aa21.12■□□□□ 0.97
CLN8-205ENST00000520991 ZNF496Q96IT1 587 aaPredicted RBP21.12■□□□□ 0.97
CLN8-205ENST00000520991 BCS1LQ9Y276 419 aa21.12■□□□□ 0.97
CLN8-205ENST00000520991 CEMIPQ8WUJ3 1361 aa21.12■□□□□ 0.97
CLN8-205ENST00000520991 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
CLN8-205ENST00000520991 DPEP1P16444 411 aa21.11■□□□□ 0.97
CLN8-205ENST00000520991 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
CLN8-205ENST00000520991 RTF1Q92541 710 aaKnown RBP21.11■□□□□ 0.97
CLN8-205ENST00000520991 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
CLN8-205ENST00000520991 ATP10DQ9P241 1426 aa21.11■□□□□ 0.97
CLN8-205ENST00000520991 NARFQ9UHQ1 456 aa21.1■□□□□ 0.97
CLN8-205ENST00000520991 BTBD11A6QL63 1104 aa21.09■□□□□ 0.97
CLN8-205ENST00000520991 FMNL2Q96PY5 1086 aa21.09■□□□□ 0.97
CLN8-205ENST00000520991 TEX13AQ9BXU3 409 aaPredicted RBP21.09■□□□□ 0.97
CLN8-205ENST00000520991 POLRMTO00411 1230 aaKnown RBP21.08■□□□□ 0.97
CLN8-205ENST00000520991 TM4SF1P30408 202 aa21.08■□□□□ 0.97
CLN8-205ENST00000520991 C1QTNF8P60827 252 aa21.08■□□□□ 0.97
CLN8-205ENST00000520991 ADCY9O60503 1353 aa21.07■□□□□ 0.96
CLN8-205ENST00000520991 A0A087WZG4 1122 aa21.06■□□□□ 0.96
CLN8-205ENST00000520991 NEFMP07197 916 aa21.06■□□□□ 0.96
CLN8-205ENST00000520991 MCM10Q7L590 875 aa21.06■□□□□ 0.96
CLN8-205ENST00000520991 ZNF330Q9Y3S2 320 aaPredicted RBP21.06■□□□□ 0.96
CLN8-205ENST00000520991 EIF5P55010 431 aaKnown RBP21.05■□□□□ 0.96
CLN8-205ENST00000520991 NFIXQ14938 502 aa21.05■□□□□ 0.96
CLN8-205ENST00000520991 KCNQ3O43525 872 aa21.04■□□□□ 0.96
CLN8-205ENST00000520991 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
CLN8-205ENST00000520991 ZNF526Q8TF50 670 aaPredicted RBP21.04■□□□□ 0.96
CLN8-205ENST00000520991 GPBP1L1Q9HC44 474 aaPredicted RBP21.04■□□□□ 0.96
CLN8-205ENST00000520991 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
CLN8-205ENST00000520991 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
CLN8-205ENST00000520991 KCNA3P22001 575 aa21.04■□□□□ 0.96
CLN8-205ENST00000520991 ARHGAP27Q6ZUM4 889 aa21.04■□□□□ 0.96
CLN8-205ENST00000520991 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
CLN8-205ENST00000520991 HTATSF1O43719 755 aaKnown RBP21.03■□□□□ 0.96
CLN8-205ENST00000520991 DCTN1Q14203 1278 aa21.03■□□□□ 0.96
CLN8-205ENST00000520991 DALRD3Q5D0E6 543 aaKnown RBP21.03■□□□□ 0.96
CLN8-205ENST00000520991 A1BGP04217 495 aa21.02■□□□□ 0.95
CLN8-205ENST00000520991 CHRNA5P30532 468 aa21.02■□□□□ 0.95
CLN8-205ENST00000520991 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.95
CLN8-205ENST00000520991 BICDL1Q6ZP65 573 aa21.02■□□□□ 0.95
CLN8-205ENST00000520991 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
CLN8-205ENST00000520991 SERPINB2P05120 415 aa21.01■□□□□ 0.95
CLN8-205ENST00000520991 AFDNP55196 1824 aaKnown RBP21■□□□□ 0.95
CLN8-205ENST00000520991 SCN7AQ01118 1682 aa21■□□□□ 0.95
CLN8-205ENST00000520991 TBC1D2BQ9UPU7 963 aa21■□□□□ 0.95
CLN8-205ENST00000520991 NRXN2Q9P2S2 1712 aa20.99■□□□□ 0.95
CLN8-205ENST00000520991 ARFGEF1Q9Y6D6 1849 aa20.99■□□□□ 0.95
CLN8-205ENST00000520991 SNRPA1P09661 255 aaKnown RBP20.98■□□□□ 0.95
CLN8-205ENST00000520991 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
CLN8-205ENST00000520991 RALBP1Q15311 655 aa20.97■□□□□ 0.95
CLN8-205ENST00000520991 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
CLN8-205ENST00000520991 TBC1D9BQ66K14 1250 aa20.97■□□□□ 0.95
CLN8-205ENST00000520991 PNNQ9H307 717 aaKnown RBP20.97■□□□□ 0.95
CLN8-205ENST00000520991 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
CLN8-205ENST00000520991 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
CLN8-205ENST00000520991 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
CLN8-205ENST00000520991 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
CLN8-205ENST00000520991 DDX10Q13206 875 aaKnown RBP20.95■□□□□ 0.94
CLN8-205ENST00000520991 DZIP3Q86Y13 1208 aaKnown RBP20.95■□□□□ 0.94
CLN8-205ENST00000520991 CARMIL3Q8ND23 1372 aa20.94■□□□□ 0.94
CLN8-205ENST00000520991 NFE2L2Q16236 605 aa20.94■□□□□ 0.94
CLN8-205ENST00000520991 C2CD5Q86YS7 1000 aa20.94■□□□□ 0.94
CLN8-205ENST00000520991 MIS18AQ9NYP9 233 aa20.94■□□□□ 0.94
CLN8-205ENST00000520991 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
CLN8-205ENST00000520991 H0YIN7 160 aa20.93■□□□□ 0.94
CLN8-205ENST00000520991 NPHP1O15259 732 aa20.93■□□□□ 0.94
CLN8-205ENST00000520991 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
CLN8-205ENST00000520991 C9orf131Q5VYM1 1079 aa20.93■□□□□ 0.94
CLN8-205ENST00000520991 PNISRQ8TF01 805 aaKnown RBP20.93■□□□□ 0.94
CLN8-205ENST00000520991 SETDB2Q96T68 719 aa20.93■□□□□ 0.94
CLN8-205ENST00000520991 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
CLN8-205ENST00000520991 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
CLN8-205ENST00000520991 TTLL6Q8N841 843 aa20.91■□□□□ 0.94
CLN8-205ENST00000520991 PRR5LQ6MZQ0 368 aa20.9■□□□□ 0.94
CLN8-205ENST00000520991 CNBD1Q8NA66 436 aa20.9■□□□□ 0.94
CLN8-205ENST00000520991 RNF181Q9P0P0 153 aa20.9■□□□□ 0.94
CLN8-205ENST00000520991 ZNF652Q9Y2D9 606 aa20.9■□□□□ 0.94
CLN8-205ENST00000520991 PDE6BP35913 854 aa20.89■□□□□ 0.93
CLN8-205ENST00000520991 CCDC24Q8N4L8 307 aa20.89■□□□□ 0.93
CLN8-205ENST00000520991 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.93
CLN8-205ENST00000520991 BRIP1Q9BX63 1249 aa20.89■□□□□ 0.93
CLN8-205ENST00000520991 LAMB4A4D0S4 1761 aa20.88■□□□□ 0.93
CLN8-205ENST00000520991 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
CLN8-205ENST00000520991 ST5P78524 1137 aa20.88■□□□□ 0.93
CLN8-205ENST00000520991 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
CLN8-205ENST00000520991 MYBBP1AQ9BQG0 1328 aaKnown RBP20.88■□□□□ 0.93
CLN8-205ENST00000520991 NBPF26B4DH59 902 aa20.87■□□□□ 0.93
CLN8-205ENST00000520991 NBPF10Q6P3W6 841 aaKnown RBP20.87■□□□□ 0.93
CLN8-205ENST00000520991 CLEC4GQ6UXB4 293 aa20.87■□□□□ 0.93
CLN8-205ENST00000520991 NBPF15Q8N660 670 aa20.87■□□□□ 0.93
CLN8-205ENST00000520991 ZNF622Q969S3 477 aaKnown RBP eCLIP20.87■□□□□ 0.93
CLN8-205ENST00000520991 ANKRD31Q8N7Z5 1873 aa20.87■□□□□ 0.93
CLN8-205ENST00000520991 KIF3CO14782 793 aa20.86■□□□□ 0.93
CLN8-205ENST00000520991 RASSF7Q02833 373 aa20.85■□□□□ 0.93
CLN8-205ENST00000520991 NBPF5PQ86XG9 351 aaPredicted RBP20.85■□□□□ 0.93
CLN8-205ENST00000520991 RIPK4P57078 832 aa20.84■□□□□ 0.93
CLN8-205ENST00000520991 EIF4A1P60842 406 aaKnown RBP20.84■□□□□ 0.93
CLN8-205ENST00000520991 CEP350Q5VT06 3117 aa20.84■□□□□ 0.93
CLN8-205ENST00000520991 NMRK2Q9NPI5 230 aa20.83■□□□□ 0.93
CLN8-205ENST00000520991 COL11A2P13942 1736 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms