RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SERPINB2P05120 415 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 SLC39A6Q13433 755 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 NFIXQ14938 502 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 DPY19L2Q6NUT2 758 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 C2CD5Q86YS7 1000 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
MRPS28-206ENST00000520946 ZC3H4Q9UPT8 1303 aaKnown RBP15.6■□□□□ 0.09
MRPS28-206ENST00000520946 RNMTO43148 476 aaKnown RBP15.59■□□□□ 0.09
MRPS28-206ENST00000520946 HMOX1P09601 288 aa15.59■□□□□ 0.09
MRPS28-206ENST00000520946 CYP19A1P11511 503 aaPredicted RBP15.59■□□□□ 0.09
MRPS28-206ENST00000520946 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
MRPS28-206ENST00000520946 IL13P35225 146 aa15.59■□□□□ 0.09
MRPS28-206ENST00000520946 TNS4Q8IZW8 715 aa15.59■□□□□ 0.09
MRPS28-206ENST00000520946 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
MRPS28-206ENST00000520946 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
MRPS28-206ENST00000520946 WDR90Q96KV7 1748 aa15.59■□□□□ 0.09
MRPS28-206ENST00000520946 A0A087WZG4 1122 aa15.58■□□□□ 0.08
MRPS28-206ENST00000520946 GLTPD2A6NH11 291 aa15.58■□□□□ 0.08
MRPS28-206ENST00000520946 STARD3NLO95772 234 aa15.58■□□□□ 0.08
MRPS28-206ENST00000520946 JMYQ8N9B5 988 aa15.58■□□□□ 0.08
MRPS28-206ENST00000520946 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.086e-8■□□□□ 10.3
MRPS28-206ENST00000520946 ZNF330Q9Y3S2 320 aaPredicted RBP15.58■□□□□ 0.08
MRPS28-206ENST00000520946 BRCA1P38398 1863 aaKnown RBP15.58■□□□□ 0.08
MRPS28-206ENST00000520946 COL13A1Q5TAT6 717 aaPredicted RBP15.57■□□□□ 0.08
MRPS28-206ENST00000520946 CLSPNQ9HAW4 1339 aa15.57■□□□□ 0.08
MRPS28-206ENST00000520946 COL15A1P39059 1388 aa15.57■□□□□ 0.08
MRPS28-206ENST00000520946 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
MRPS28-206ENST00000520946 ZBTB1Q9Y2K1 713 aa15.56■□□□□ 0.08
MRPS28-206ENST00000520946 VSIG10Q8N0Z9 540 aa15.55■□□□□ 0.08
MRPS28-206ENST00000520946 TNRC6CQ9HCJ0 1690 aaKnown RBP15.54■□□□□ 0.08
MRPS28-206ENST00000520946 DIAPH1O60610 1272 aaKnown RBP15.54■□□□□ 0.08
MRPS28-206ENST00000520946 PDE6BP35913 854 aa15.54■□□□□ 0.08
MRPS28-206ENST00000520946 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
MRPS28-206ENST00000520946 TEFQ10587 303 aa15.53■□□□□ 0.08
MRPS28-206ENST00000520946 MTHFSDQ2M296 383 aaKnown RBP15.53■□□□□ 0.08
MRPS28-206ENST00000520946 ERFEQ4G0M1 354 aa15.53■□□□□ 0.08
MRPS28-206ENST00000520946 TEX13AQ9BXU3 409 aaPredicted RBP15.53■□□□□ 0.08
MRPS28-206ENST00000520946 TJP1Q07157 1748 aa15.53■□□□□ 0.08
MRPS28-206ENST00000520946 SCN11AQ9UI33 1791 aa15.52■□□□□ 0.08
MRPS28-206ENST00000520946 SBF1O95248 1867 aa15.51■□□□□ 0.07
MRPS28-206ENST00000520946 C21orf2O43822 256 aa15.51■□□□□ 0.07
MRPS28-206ENST00000520946 HSPA1AP0DMV8 641 aaKnown RBP15.51■□□□□ 0.07
MRPS28-206ENST00000520946 HSPA1BP0DMV9 641 aaKnown RBP15.51■□□□□ 0.07
MRPS28-206ENST00000520946 CNGB1Q14028 1251 aaPredicted RBP15.51■□□□□ 0.07
MRPS28-206ENST00000520946 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
MRPS28-206ENST00000520946 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
MRPS28-206ENST00000520946 SETDB2Q96T68 719 aa15.5■□□□□ 0.07
MRPS28-206ENST00000520946 BRIP1Q9BX63 1249 aa15.5■□□□□ 0.07
MRPS28-206ENST00000520946 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
MRPS28-206ENST00000520946 TBC1D2BQ9UPU7 963 aa15.5■□□□□ 0.07
MRPS28-206ENST00000520946 ST5P78524 1137 aa15.49■□□□□ 0.07
MRPS28-206ENST00000520946 TBC1D9BQ66K14 1250 aa15.49■□□□□ 0.07
MRPS28-206ENST00000520946 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
MRPS28-206ENST00000520946 CCER1Q8TC90 406 aaPredicted RBP15.49■□□□□ 0.07
MRPS28-206ENST00000520946 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
MRPS28-206ENST00000520946 TAOK3Q9H2K8 898 aa15.49■□□□□ 0.07
MRPS28-206ENST00000520946 NFKBIEO00221 500 aa15.48■□□□□ 0.07
MRPS28-206ENST00000520946 PRELPP51888 382 aa15.48■□□□□ 0.07
MRPS28-206ENST00000520946 EIF5P55010 431 aaKnown RBP15.48■□□□□ 0.07
MRPS28-206ENST00000520946 SOGA3Q5TF21 947 aa15.48■□□□□ 0.07
MRPS28-206ENST00000520946 CNBD1Q8NA66 436 aa15.48■□□□□ 0.07
MRPS28-206ENST00000520946 GAS2L2Q8NHY3 880 aa15.48■□□□□ 0.07
MRPS28-206ENST00000520946 GNAT3A8MTJ3 354 aa15.47■□□□□ 0.07
MRPS28-206ENST00000520946 AMER1Q5JTC6 1135 aaPredicted RBP15.47■□□□□ 0.07
MRPS28-206ENST00000520946 ZNF790Q6PG37 636 aa15.47■□□□□ 0.07
MRPS28-206ENST00000520946 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
MRPS28-206ENST00000520946 AFDNP55196 1824 aaKnown RBP15.47■□□□□ 0.07
MRPS28-206ENST00000520946 CARMIL3Q8ND23 1372 aa15.47■□□□□ 0.07
MRPS28-206ENST00000520946 IL6STP40189 918 aaPredicted RBP15.46■□□□□ 0.07
MRPS28-206ENST00000520946 PRR5LQ6MZQ0 368 aa15.46■□□□□ 0.07
MRPS28-206ENST00000520946 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
MRPS28-206ENST00000520946 ZNF496Q96IT1 587 aaPredicted RBP15.46■□□□□ 0.07
MRPS28-206ENST00000520946 MKRN1Q9UHC7 482 aaKnown RBP15.45■□□□□ 0.06
MRPS28-206ENST00000520946 MRC1P22897 1456 aa15.45■□□□□ 0.06
MRPS28-206ENST00000520946 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
MRPS28-206ENST00000520946 IQCA1LA6NCM1 817 aa15.44■□□□□ 0.06
MRPS28-206ENST00000520946 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
MRPS28-206ENST00000520946 MASTLQ96GX5 879 aa15.44■□□□□ 0.06
MRPS28-206ENST00000520946 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
MRPS28-206ENST00000520946 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
MRPS28-206ENST00000520946 CCDC88AQ3V6T2 1871 aa15.44■□□□□ 0.06
MRPS28-206ENST00000520946 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
MRPS28-206ENST00000520946 A1BGP04217 495 aa15.43■□□□□ 0.06
MRPS28-206ENST00000520946 STYK1Q6J9G0 422 aa15.43■□□□□ 0.06
MRPS28-206ENST00000520946 NBPF5PQ86XG9 351 aaPredicted RBP15.43■□□□□ 0.06
MRPS28-206ENST00000520946 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
MRPS28-206ENST00000520946 AIDAQ96BJ3 306 aa15.43■□□□□ 0.06
MRPS28-206ENST00000520946 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
MRPS28-206ENST00000520946 POTECB2RU33 542 aa15.42■□□□□ 0.06
MRPS28-206ENST00000520946 PRPF40BQ6NWY9 871 aaKnown RBP15.42■□□□□ 0.06
MRPS28-206ENST00000520946 IL17REQ8NFR9 667 aa15.42■□□□□ 0.06
MRPS28-206ENST00000520946 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
MRPS28-206ENST00000520946 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
MRPS28-206ENST00000520946 TIAM2Q8IVF5 1701 aa15.42■□□□□ 0.06
MRPS28-206ENST00000520946 NRXN2Q9P2S2 1712 aa15.42■□□□□ 0.06
MRPS28-206ENST00000520946 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
MRPS28-206ENST00000520946 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
MRPS28-206ENST00000520946 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms