RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
SRGAP3-212ENST00000520860 CCDC88AQ3V6T2 1871 aa18.18■□□□□ 0.5
SRGAP3-212ENST00000520860 NFKBIEO00221 500 aa18.18■□□□□ 0.5
SRGAP3-212ENST00000520860 MTHFSP49914 203 aa18.18■□□□□ 0.5
SRGAP3-212ENST00000520860 NFIXQ14938 502 aa18.17■□□□□ 0.5
SRGAP3-212ENST00000520860 AMOTQ4VCS5 1084 aa18.17■□□□□ 0.5
SRGAP3-212ENST00000520860 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
SRGAP3-212ENST00000520860 INTS5Q6P9B9 1019 aaKnown RBP18.17■□□□□ 0.5
SRGAP3-212ENST00000520860 C2CD5Q86YS7 1000 aa18.17■□□□□ 0.5
SRGAP3-212ENST00000520860 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
SRGAP3-212ENST00000520860 H0YIN7 160 aa18.16■□□□□ 0.5
SRGAP3-212ENST00000520860 ERFEQ4G0M1 354 aa18.16■□□□□ 0.5
SRGAP3-212ENST00000520860 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
SRGAP3-212ENST00000520860 DLEC1Q9Y238 1755 aa18.15■□□□□ 0.5
SRGAP3-212ENST00000520860 SERPINB2P05120 415 aa18.15■□□□□ 0.5
SRGAP3-212ENST00000520860 TJP1Q07157 1748 aa18.15■□□□□ 0.5
SRGAP3-212ENST00000520860 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.5
SRGAP3-212ENST00000520860 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
SRGAP3-212ENST00000520860 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
SRGAP3-212ENST00000520860 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
SRGAP3-212ENST00000520860 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
SRGAP3-212ENST00000520860 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
SRGAP3-212ENST00000520860 DNAJC10Q8IXB1 793 aa18.13■□□□□ 0.49
SRGAP3-212ENST00000520860 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
SRGAP3-212ENST00000520860 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
SRGAP3-212ENST00000520860 POTEJP0CG39 1038 aa18.11■□□□□ 0.49
SRGAP3-212ENST00000520860 LBX1P52954 281 aa18.11■□□□□ 0.49
SRGAP3-212ENST00000520860 COL15A1P39059 1388 aa18.11■□□□□ 0.49
SRGAP3-212ENST00000520860 VEGFBP49765 207 aa18.1■□□□□ 0.49
SRGAP3-212ENST00000520860 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
SRGAP3-212ENST00000520860 ABHD8Q96I13 439 aa18.1■□□□□ 0.49
SRGAP3-212ENST00000520860 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
SRGAP3-212ENST00000520860 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
SRGAP3-212ENST00000520860 CARMIL3Q8ND23 1372 aa18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 IQCA1LA6NCM1 817 aa18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 C21orf2O43822 256 aa18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 DDNO94850 711 aaPredicted RBP18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 LDHDQ86WU2 507 aa18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 PCDH10Q9P2E7 1040 aa18.09■□□□□ 0.49
SRGAP3-212ENST00000520860 PASKQ96RG2 1323 aa18.08■□□□□ 0.49
SRGAP3-212ENST00000520860 TMEM88BA6NKF7 163 aa18.08■□□□□ 0.48
SRGAP3-212ENST00000520860 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
SRGAP3-212ENST00000520860 TAOK3Q9H2K8 898 aa18.08■□□□□ 0.48
SRGAP3-212ENST00000520860 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.48
SRGAP3-212ENST00000520860 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
SRGAP3-212ENST00000520860 LTBP3Q9NS15 1303 aa18.07■□□□□ 0.48
SRGAP3-212ENST00000520860 BICDL1Q6ZP65 573 aa18.07■□□□□ 0.48
SRGAP3-212ENST00000520860 ZBTB1Q9Y2K1 713 aa18.07■□□□□ 0.48
SRGAP3-212ENST00000520860 PDE6BP35913 854 aa18.06■□□□□ 0.48
SRGAP3-212ENST00000520860 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
SRGAP3-212ENST00000520860 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
SRGAP3-212ENST00000520860 HSPA8P11142 646 aaKnown RBP18.04■□□□□ 0.48
SRGAP3-212ENST00000520860 MLLT1Q03111 559 aaPredicted RBP18.04■□□□□ 0.48
SRGAP3-212ENST00000520860 BRIP1Q9BX63 1249 aa18.04■□□□□ 0.48
SRGAP3-212ENST00000520860 TAF1DQ9H5J8 278 aaPredicted RBP18.04■□□□□ 0.48
SRGAP3-212ENST00000520860 MAP2K1Q02750 393 aaPredicted RBP18.03■□□□□ 0.48
SRGAP3-212ENST00000520860 L3MBTL3Q96JM7 780 aaPredicted RBP18.03■□□□□ 0.48
SRGAP3-212ENST00000520860 SLC52A2Q9HAB3 445 aa18.03■□□□□ 0.48
SRGAP3-212ENST00000520860 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
SRGAP3-212ENST00000520860 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.48
SRGAP3-212ENST00000520860 SLC39A6Q13433 755 aa18.02■□□□□ 0.48
SRGAP3-212ENST00000520860 EAPPQ56P03 285 aaPredicted RBP18.02■□□□□ 0.48
SRGAP3-212ENST00000520860 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
SRGAP3-212ENST00000520860 SULT6B1Q6IMI4 303 aa18.02■□□□□ 0.48
SRGAP3-212ENST00000520860 CNKSR1Q969H4 720 aa18.02■□□□□ 0.48
SRGAP3-212ENST00000520860 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.47
SRGAP3-212ENST00000520860 SCN4AP35499 1836 aa18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 A0A087WZG4 1122 aa18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 ITGBL1O95965 494 aaPredicted RBP18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 DEFB115Q30KQ5 88 aa18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 ANKRD31Q8N7Z5 1873 aa18.01■□□□□ 0.47
SRGAP3-212ENST00000520860 RASSF10A6NK89 507 aa18■□□□□ 0.47
SRGAP3-212ENST00000520860 CCDC85CA6NKD9 419 aa18■□□□□ 0.47
SRGAP3-212ENST00000520860 NPHP1O15259 732 aa18■□□□□ 0.47
SRGAP3-212ENST00000520860 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
SRGAP3-212ENST00000520860 PRR5LQ6MZQ0 368 aa17.99■□□□□ 0.47
SRGAP3-212ENST00000520860 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
SRGAP3-212ENST00000520860 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
SRGAP3-212ENST00000520860 CCDC24Q8N4L8 307 aa17.99■□□□□ 0.47
SRGAP3-212ENST00000520860 COL11A2P13942 1736 aaPredicted RBP17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 LGR6Q9HBX8 967 aa17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 HACL1Q9UJ83 578 aa17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 ABT1Q9ULW3 272 aaKnown RBP17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
SRGAP3-212ENST00000520860 MRC1P22897 1456 aa17.97■□□□□ 0.47
SRGAP3-212ENST00000520860 STARD3NLO95772 234 aa17.97■□□□□ 0.47
SRGAP3-212ENST00000520860 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
SRGAP3-212ENST00000520860 CNBD1Q8NA66 436 aa17.97■□□□□ 0.47
SRGAP3-212ENST00000520860 BEGAINQ9BUH8 593 aa17.97■□□□□ 0.47
SRGAP3-212ENST00000520860 RNMTO43148 476 aaKnown RBP17.96■□□□□ 0.47
SRGAP3-212ENST00000520860 EPHX2P34913 555 aa17.96■□□□□ 0.47
SRGAP3-212ENST00000520860 RGS19P49795 217 aa17.96■□□□□ 0.47
SRGAP3-212ENST00000520860 PNMA8AQ86V59 439 aaPredicted RBP17.96■□□□□ 0.47
SRGAP3-212ENST00000520860 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
SRGAP3-212ENST00000520860 SLX4Q8IY92 1834 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms