RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TTC5Q8N0Z6 440 aa26.39■■□□□ 1.82
PABPC1-215ENST00000520804 ZNF526Q8TF50 670 aaPredicted RBP26.39■■□□□ 1.82
PABPC1-215ENST00000520804 FCHSD2O94868 740 aa26.38■■□□□ 1.81
PABPC1-215ENST00000520804 TEFQ10587 303 aa26.38■■□□□ 1.81
PABPC1-215ENST00000520804 NARFQ9UHQ1 456 aa26.38■■□□□ 1.81
PABPC1-215ENST00000520804 SIPA1L3O60292 1781 aaPredicted RBP26.38■■□□□ 1.81
PABPC1-215ENST00000520804 RSPH6AQ9H0K4 717 aa26.36■■□□□ 1.81
PABPC1-215ENST00000520804 PRKAR2BP31323 418 aa26.35■■□□□ 1.81
PABPC1-215ENST00000520804 ZNF790Q6PG37 636 aa26.35■■□□□ 1.81
PABPC1-215ENST00000520804 ARHGAP27Q6ZUM4 889 aa26.35■■□□□ 1.81
PABPC1-215ENST00000520804 PHACTR3Q96KR7 559 aa26.35■■□□□ 1.81
PABPC1-215ENST00000520804 PIM2Q9P1W9 311 aa26.35■■□□□ 1.81
PABPC1-215ENST00000520804 STARD3NLO95772 234 aa26.34■■□□□ 1.81
PABPC1-215ENST00000520804 CANXP27824 592 aaKnown RBP26.34■■□□□ 1.81
PABPC1-215ENST00000520804 PPP2R1AP30153 589 aa26.34■■□□□ 1.81
PABPC1-215ENST00000520804 ZNF496Q96IT1 587 aaPredicted RBP26.34■■□□□ 1.81
PABPC1-215ENST00000520804 NUDCQ9Y266 331 aa26.34■■□□□ 1.81
PABPC1-215ENST00000520804 ARFGEF1Q9Y6D6 1849 aa26.34■■□□□ 1.81
PABPC1-215ENST00000520804 CEMIPQ8WUJ3 1361 aa26.33■■□□□ 1.81
PABPC1-215ENST00000520804 HEG1Q9ULI3 1381 aa26.33■■□□□ 1.81
PABPC1-215ENST00000520804 NFIXQ14938 502 aa26.33■■□□□ 1.81
PABPC1-215ENST00000520804 BCL2L12Q9HB09 334 aa26.33■■□□□ 1.81
PABPC1-215ENST00000520804 CHRNA5P30532 468 aa26.31■■□□□ 1.8
PABPC1-215ENST00000520804 EIF5P55010 431 aaKnown RBP26.31■■□□□ 1.8
PABPC1-215ENST00000520804 DALRD3Q5D0E6 543 aaKnown RBP26.31■■□□□ 1.8
PABPC1-215ENST00000520804 TEX13AQ9BXU3 409 aaPredicted RBP26.31■■□□□ 1.8
PABPC1-215ENST00000520804 NRXN2Q9P2S2 1712 aa26.31■■□□□ 1.8
PABPC1-215ENST00000520804 AFDNP55196 1824 aaKnown RBP26.3■■□□□ 1.8
PABPC1-215ENST00000520804 U2AF1L5P0DN76 240 aaPredicted RBP26.29■■□□□ 1.8
PABPC1-215ENST00000520804 U2AF1Q01081 240 aaKnown RBP eCLIP26.29■■□□□ 1.8
PABPC1-215ENST00000520804 A0A087WZG4 1122 aa26.28■■□□□ 1.8
PABPC1-215ENST00000520804 FMNL2Q96PY5 1086 aa26.28■■□□□ 1.8
PABPC1-215ENST00000520804 KIF3CO14782 793 aa26.27■■□□□ 1.8
PABPC1-215ENST00000520804 BTBD11A6QL63 1104 aa26.26■■□□□ 1.79
PABPC1-215ENST00000520804 SERPINB2P05120 415 aa26.26■■□□□ 1.79
PABPC1-215ENST00000520804 KCNQ3O43525 872 aa26.24■■□□□ 1.79
PABPC1-215ENST00000520804 IL6STP40189 918 aaPredicted RBP26.24■■□□□ 1.79
PABPC1-215ENST00000520804 C9orf131Q5VYM1 1079 aa26.23■■□□□ 1.79
PABPC1-215ENST00000520804 SCN7AQ01118 1682 aa26.22■■□□□ 1.79
PABPC1-215ENST00000520804 A1BGP04217 495 aa26.22■■□□□ 1.79
PABPC1-215ENST00000520804 RTF1Q92541 710 aaKnown RBP26.22■■□□□ 1.79
PABPC1-215ENST00000520804 DLEC1Q9Y238 1755 aa26.21■■□□□ 1.79
PABPC1-215ENST00000520804 BICDL1Q6ZP65 573 aa26.21■■□□□ 1.79
PABPC1-215ENST00000520804 MCM10Q7L590 875 aa26.21■■□□□ 1.79
PABPC1-215ENST00000520804 ZNF330Q9Y3S2 320 aaPredicted RBP26.21■■□□□ 1.79
PABPC1-215ENST00000520804 TBC1D9BQ66K14 1250 aa26.2■■□□□ 1.78
PABPC1-215ENST00000520804 TBC1D2BQ9UPU7 963 aa26.2■■□□□ 1.78
PABPC1-215ENST00000520804 CARMIL3Q8ND23 1372 aa26.2■■□□□ 1.78
PABPC1-215ENST00000520804 HSPA6P17066 643 aa26.19■■□□□ 1.78
PABPC1-215ENST00000520804 HTATSF1O43719 755 aaKnown RBP26.18■■□□□ 1.78
PABPC1-215ENST00000520804 USP16Q9Y5T5 823 aa26.18■■□□□ 1.78
PABPC1-215ENST00000520804 NPM2Q86SE8 214 aaKnown RBP26.17■■□□□ 1.78
PABPC1-215ENST00000520804 C2CD5Q86YS7 1000 aa26.17■■□□□ 1.78
PABPC1-215ENST00000520804 RNF181Q9P0P0 153 aa26.17■■□□□ 1.78
PABPC1-215ENST00000520804 DCTN1Q14203 1278 aa26.16■■□□□ 1.78
PABPC1-215ENST00000520804 SBF1O95248 1867 aa26.16■■□□□ 1.78
PABPC1-215ENST00000520804 H0YIN7 160 aa26.15■■□□□ 1.78
PABPC1-215ENST00000520804 CAMTA2O94983 1202 aa26.15■■□□□ 1.78
PABPC1-215ENST00000520804 TTLL6Q8N841 843 aa26.15■■□□□ 1.78
PABPC1-215ENST00000520804 NMRK2Q9NPI5 230 aa26.15■■□□□ 1.78
PABPC1-215ENST00000520804 PRAMEF22A3QJZ6 481 aa26.14■■□□□ 1.78
PABPC1-215ENST00000520804 SNRPA1P09661 255 aaKnown RBP26.14■■□□□ 1.78
PABPC1-215ENST00000520804 ANKRD31Q8N7Z5 1873 aa26.13■■□□□ 1.77
PABPC1-215ENST00000520804 BCORQ6W2J9 1755 aa26.13■■□□□ 1.77
PABPC1-215ENST00000520804 TOMM70O94826 608 aa26.13■■□□□ 1.77
PABPC1-215ENST00000520804 PRR5LQ6MZQ0 368 aa26.13■■□□□ 1.77
PABPC1-215ENST00000520804 BRIP1Q9BX63 1249 aa26.13■■□□□ 1.77
PABPC1-215ENST00000520804 DZIP3Q86Y13 1208 aaKnown RBP26.12■■□□□ 1.77
PABPC1-215ENST00000520804 SETDB2Q96T68 719 aa26.12■■□□□ 1.77
PABPC1-215ENST00000520804 PDZRN3Q9UPQ7 1066 aa26.12■■□□□ 1.77
PABPC1-215ENST00000520804 CEP350Q5VT06 3117 aa26.11■■□□□ 1.77
PABPC1-215ENST00000520804 PIP4K2AP48426 406 aaPredicted RBP26.11■■□□□ 1.77
PABPC1-215ENST00000520804 RASSF7Q02833 373 aa26.11■■□□□ 1.77
PABPC1-215ENST00000520804 TAF7Q15545 349 aaPredicted RBP26.11■■□□□ 1.77
PABPC1-215ENST00000520804 NEFMP07197 916 aa26.1■■□□□ 1.77
PABPC1-215ENST00000520804 PDE6BP35913 854 aa26.1■■□□□ 1.77
PABPC1-215ENST00000520804 KDM2BQ8NHM5 1336 aa26.1■■□□□ 1.77
PABPC1-215ENST00000520804 CCDC24Q8N4L8 307 aa26.09■■□□□ 1.77
PABPC1-215ENST00000520804 PLEKHF1Q96S99 279 aa26.08■■□□□ 1.77
PABPC1-215ENST00000520804 ZC3H4Q9UPT8 1303 aaKnown RBP26.08■■□□□ 1.77
PABPC1-215ENST00000520804 COL11A2P13942 1736 aaPredicted RBP26.08■■□□□ 1.76
PABPC1-215ENST00000520804 DLG5Q8TDM6 1919 aa26.08■■□□□ 1.76
PABPC1-215ENST00000520804 LMNB1P20700 586 aa26.07■■□□□ 1.76
PABPC1-215ENST00000520804 CNBD1Q8NA66 436 aa26.07■■□□□ 1.76
PABPC1-215ENST00000520804 ZNF622Q969S3 477 aaKnown RBP eCLIP26.07■■□□□ 1.76
PABPC1-215ENST00000520804 PRELPP51888 382 aa26.06■■□□□ 1.76
PABPC1-215ENST00000520804 CLEC4GQ6UXB4 293 aa26.06■■□□□ 1.76
PABPC1-215ENST00000520804 MIS18AQ9NYP9 233 aa26.06■■□□□ 1.76
PABPC1-215ENST00000520804 NBPF26B4DH59 902 aa26.05■■□□□ 1.76
PABPC1-215ENST00000520804 NBPF10Q6P3W6 841 aaKnown RBP26.05■■□□□ 1.76
PABPC1-215ENST00000520804 NBPF15Q8N660 670 aa26.05■■□□□ 1.76
PABPC1-215ENST00000520804 TNRC6CQ9HCJ0 1690 aaKnown RBP26.04■■□□□ 1.76
PABPC1-215ENST00000520804 NFKBIEO00221 500 aa26.04■■□□□ 1.76
PABPC1-215ENST00000520804 NPHP1O15259 732 aa26.04■■□□□ 1.76
PABPC1-215ENST00000520804 ST5P78524 1137 aa26.04■■□□□ 1.76
PABPC1-215ENST00000520804 C16orf71Q8IYS4 520 aaPredicted RBP26.04■■□□□ 1.76
PABPC1-215ENST00000520804 RBM46Q8TBY0 533 aaKnown RBP26.04■■□□□ 1.76
PABPC1-215ENST00000520804 ZNF652Q9Y2D9 606 aa26.04■■□□□ 1.76
PABPC1-215ENST00000520804 NFE2L2Q16236 605 aa26.03■■□□□ 1.76
PABPC1-215ENST00000520804 PNISRQ8TF01 805 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms