RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 BEND3Q5T5X7 828 aa33.59■■■□□ 2.97
COL13A1-212ENST00000520133 KSR2Q6VAB6 950 aa33.59■■■□□ 2.97
COL13A1-212ENST00000520133 DDX54Q8TDD1 881 aaKnown RBP33.59■■■□□ 2.97
COL13A1-212ENST00000520133 USP35Q9P2H5 1018 aa33.59■■■□□ 2.97
COL13A1-212ENST00000520133 PDIA6Q15084 440 aa33.56■■■□□ 2.96
COL13A1-212ENST00000520133 ATP8B2P98198 1209 aa33.56■■■□□ 2.96
COL13A1-212ENST00000520133 DDRGK1Q96HY6 314 aa33.56■■■□□ 2.96
COL13A1-212ENST00000520133 MAP3K2Q9Y2U5 619 aa33.56■■■□□ 2.96
COL13A1-212ENST00000520133 LRRFIP2Q9Y608 721 aaKnown RBP33.55■■■□□ 2.96
COL13A1-212ENST00000520133 LAMB4A4D0S4 1761 aa33.54■■■□□ 2.96
COL13A1-212ENST00000520133 UPF2Q9HAU5 1272 aaKnown RBP33.54■■■□□ 2.96
COL13A1-212ENST00000520133 BMP2KLQ5H9B9 411 aa33.53■■■□□ 2.96
COL13A1-212ENST00000520133 ALDH1L1O75891 902 aa33.53■■■□□ 2.96
COL13A1-212ENST00000520133 UBR2Q8IWV8 1755 aa33.52■■■□□ 2.96
COL13A1-212ENST00000520133 ERICH6Q7L0X2 663 aa33.52■■■□□ 2.96
COL13A1-212ENST00000520133 PLCH1Q4KWH8 1693 aa33.51■■■□□ 2.96
COL13A1-212ENST00000520133 NOP58Q9Y2X3 529 aaKnown RBP33.51■■■□□ 2.95
COL13A1-212ENST00000520133 USP16Q9Y5T5 823 aa33.51■■■□□ 2.95
COL13A1-212ENST00000520133 SEC24BO95487 1268 aa33.5■■■□□ 2.95
COL13A1-212ENST00000520133 PAPPAQ13219 1627 aa33.5■■■□□ 2.95
COL13A1-212ENST00000520133 DISP2A7MBM2 1401 aa33.49■■■□□ 2.95
COL13A1-212ENST00000520133 AIMP1Q12904 312 aaKnown RBP33.49■■■□□ 2.95
COL13A1-212ENST00000520133 HDAC5Q9UQL6 1122 aa33.49■■■□□ 2.95
COL13A1-212ENST00000520133 MYL6BP14649 208 aa33.48■■■□□ 2.95
COL13A1-212ENST00000520133 GLI3P10071 1580 aa33.48■■■□□ 2.95
COL13A1-212ENST00000520133 PNMA6EA0A0J9YXQ4 647 aa33.46■■■□□ 2.95
COL13A1-212ENST00000520133 PIP4K2BP78356 416 aa33.46■■■□□ 2.95
COL13A1-212ENST00000520133 LINS1Q8NG48 757 aa33.46■■■□□ 2.95
COL13A1-212ENST00000520133 RIC3Q7Z5B4 369 aa33.46■■■□□ 2.95
COL13A1-212ENST00000520133 PLEKHM2Q8IWE5 1019 aa33.46■■■□□ 2.95
COL13A1-212ENST00000520133 ERBB4Q15303 1308 aa33.45■■■□□ 2.95
COL13A1-212ENST00000520133 TOGARAM1Q9Y4F4 1720 aa33.45■■■□□ 2.95
COL13A1-212ENST00000520133 NBPF7P0C2Y1 421 aaPredicted RBP33.45■■■□□ 2.95
COL13A1-212ENST00000520133 WNK3Q9BYP7 1800 aa33.44■■■□□ 2.94
COL13A1-212ENST00000520133 APBB1O00213 710 aa33.44■■■□□ 2.94
COL13A1-212ENST00000520133 C9orf78Q9NZ63 289 aaPredicted RBP33.44■■■□□ 2.94
COL13A1-212ENST00000520133 XAGE3Q8WTP9 111 aa33.44■■■□□ 2.94
COL13A1-212ENST00000520133 TMOD3Q9NYL9 352 aa33.44■■■□□ 2.94
COL13A1-212ENST00000520133 ADAMTS2O95450 1211 aa33.43■■■□□ 2.94
COL13A1-212ENST00000520133 COPS6Q7L5N1 327 aa33.43■■■□□ 2.94
COL13A1-212ENST00000520133 SSH3Q8TE77 659 aa33.43■■■□□ 2.94
COL13A1-212ENST00000520133 NEXNQ0ZGT2 675 aa33.42■■■□□ 2.94
COL13A1-212ENST00000520133 KCPQ6ZWJ8 1503 aa33.42■■■□□ 2.94
COL13A1-212ENST00000520133 EXOC6BQ9Y2D4 811 aa33.42■■■□□ 2.94
COL13A1-212ENST00000520133 IBTKQ9P2D0 1353 aaPredicted RBP33.41■■■□□ 2.94
COL13A1-212ENST00000520133 TNS2Q63HR2 1409 aa33.4■■■□□ 2.94
COL13A1-212ENST00000520133 SMARCA5O60264 1052 aaPredicted RBP33.4■■■□□ 2.94
COL13A1-212ENST00000520133 LRP10Q7Z4F1 713 aa33.4■■■□□ 2.94
COL13A1-212ENST00000520133 NRAPQ86VF7 1730 aa33.4■■■□□ 2.94
COL13A1-212ENST00000520133 EXOC5O00471 708 aa33.39■■■□□ 2.94
COL13A1-212ENST00000520133 PPP1R42Q7Z4L9 355 aa33.39■■■□□ 2.94
COL13A1-212ENST00000520133 C16orf71Q8IYS4 520 aaPredicted RBP33.39■■■□□ 2.94
COL13A1-212ENST00000520133 CDCA7Q9BWT1 371 aaPredicted RBP33.39■■■□□ 2.94
COL13A1-212ENST00000520133 LRRCC1Q9C099 1032 aa33.39■■■□□ 2.94
COL13A1-212ENST00000520133 ANKRD13DQ6ZTN6 518 aa33.39■■■□□ 2.94
COL13A1-212ENST00000520133 POLA2Q14181 598 aa33.38■■■□□ 2.93
COL13A1-212ENST00000520133 CWF19L2Q2TBE0 894 aaKnown RBP33.38■■■□□ 2.93
COL13A1-212ENST00000520133 ITGB4P16144 1822 aa33.38■■■□□ 2.93
COL13A1-212ENST00000520133 METTL22Q9BUU2 404 aaPredicted RBP33.37■■■□□ 2.93
COL13A1-212ENST00000520133 BCL11AQ9H165 835 aa33.37■■■□□ 2.93
COL13A1-212ENST00000520133 THRAP3Q9Y2W1 955 aaKnown RBP33.37■■■□□ 2.93
COL13A1-212ENST00000520133 UBAP1LF5GYI3 381 aa33.36■■■□□ 2.93
COL13A1-212ENST00000520133 SRGAP3O43295 1099 aa33.36■■■□□ 2.93
COL13A1-212ENST00000520133 TTC22Q5TAA0 569 aa33.36■■■□□ 2.93
COL13A1-212ENST00000520133 LRP6O75581 1613 aa33.36■■■□□ 2.93
COL13A1-212ENST00000520133 KAT6BQ8WYB5 2073 aa33.36■■■□□ 2.93
COL13A1-212ENST00000520133 NWD2Q9ULI1 1742 aa33.35■■■□□ 2.93
COL13A1-212ENST00000520133 GRM8O00222 908 aa33.35■■■□□ 2.93
COL13A1-212ENST00000520133 TBC1D32Q96NH3 1257 aa33.35■■■□□ 2.93
COL13A1-212ENST00000520133 UTYO14607 1347 aa33.35■■■□□ 2.93
COL13A1-212ENST00000520133 NUTM2BA6NNL0 878 aaPredicted RBP33.35■■■□□ 2.93
COL13A1-212ENST00000520133 NUTM2EB1AL46 878 aaPredicted RBP33.35■■■□□ 2.93
COL13A1-212ENST00000520133 PTCD1O75127 700 aaKnown RBP33.35■■■□□ 2.93
COL13A1-212ENST00000520133 NUTM2AQ8IVF1 878 aaPredicted RBP33.35■■■□□ 2.93
COL13A1-212ENST00000520133 RAB11FIP3O75154 756 aa33.34■■■□□ 2.93
COL13A1-212ENST00000520133 MTX1Q13505 466 aa33.34■■■□□ 2.93
COL13A1-212ENST00000520133 ARFGEF2Q9Y6D5 1785 aa33.33■■■□□ 2.93
COL13A1-212ENST00000520133 PIP4K2AP48426 406 aaPredicted RBP33.32■■■□□ 2.93
COL13A1-212ENST00000520133 MFAP1P55081 439 aaKnown RBP33.32■■■□□ 2.93
COL13A1-212ENST00000520133 OTUD7AQ8TE49 926 aaPredicted RBP33.32■■■□□ 2.93
COL13A1-212ENST00000520133 SPATA31A1Q5TZJ5 1347 aa33.32■■■□□ 2.93
COL13A1-212ENST00000520133 IGKV5-2P06315 115 aa33.32■■■□□ 2.92
COL13A1-212ENST00000520133 GSPT1P15170 499 aaKnown RBP33.32■■■□□ 2.92
COL13A1-212ENST00000520133 NEURL1BA8MQ27 555 aa33.31■■■□□ 2.92
COL13A1-212ENST00000520133 PIGBQ92521 554 aa33.31■■■□□ 2.92
COL13A1-212ENST00000520133 MYD88Q99836 296 aa33.31■■■□□ 2.92
COL13A1-212ENST00000520133 OSBPL3Q9H4L5 887 aa33.31■■■□□ 2.92
COL13A1-212ENST00000520133 DAXXQ9UER7 740 aaPredicted RBP33.31■■■□□ 2.92
COL13A1-212ENST00000520133 EIF5BO60841 1220 aaKnown RBP33.3■■■□□ 2.92
COL13A1-212ENST00000520133 SURF6O75683 361 aaKnown RBP33.3■■■□□ 2.92
COL13A1-212ENST00000520133 HSP90AB4PQ58FF6 505 aa33.3■■■□□ 2.92
COL13A1-212ENST00000520133 PLBD2Q8NHP8 589 aa33.3■■■□□ 2.92
COL13A1-212ENST00000520133 AFDNP55196 1824 aaKnown RBP33.3■■■□□ 2.92
COL13A1-212ENST00000520133 CDC45O75419 566 aa33.3■■■□□ 2.92
COL13A1-212ENST00000520133 TEX13AQ9BXU3 409 aaPredicted RBP33.3■■■□□ 2.92
COL13A1-212ENST00000520133 VSIG10Q8N0Z9 540 aa33.29■■■□□ 2.92
COL13A1-212ENST00000520133 NBPF26B4DH59 902 aa33.28■■■□□ 2.92
COL13A1-212ENST00000520133 NBPF14Q5TI25 921 aa33.28■■■□□ 2.92
COL13A1-212ENST00000520133 NBPF10Q6P3W6 841 aaKnown RBP33.28■■■□□ 2.92
COL13A1-212ENST00000520133 NBPF15Q8N660 670 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms