RNA–Protein interactions for RNA: ENST00000519461.1

LINC00599-203, long intergenic non-protein coding RNA 599, humanhuman

TSL 1 (best) BASIC

Gene LINC00599, Length 2,922 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-203ENST00000519461 PDIA6Q15084 440 aa20.39■□□□□ 0.85
LINC00599-203ENST00000519461 USP16Q9Y5T5 823 aa20.39■□□□□ 0.85
LINC00599-203ENST00000519461 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
LINC00599-203ENST00000519461 SRGAP3O43295 1099 aa20.37■□□□□ 0.85
LINC00599-203ENST00000519461 FRAT2O75474 233 aaPredicted RBP20.37■□□□□ 0.85
LINC00599-203ENST00000519461 LRRCC1Q9C099 1032 aa20.37■□□□□ 0.85
LINC00599-203ENST00000519461 C5P01031 1676 aa20.37■□□□□ 0.85
LINC00599-203ENST00000519461 PDE1AP54750 535 aa20.37■□□□□ 0.85
LINC00599-203ENST00000519461 LARP1Q6PKG0 1096 aaKnown RBP20.37■□□□□ 0.85
LINC00599-203ENST00000519461 CPDO75976 1380 aa20.36■□□□□ 0.85
LINC00599-203ENST00000519461 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
LINC00599-203ENST00000519461 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
LINC00599-203ENST00000519461 KIF2CQ99661 725 aa20.36■□□□□ 0.85
LINC00599-203ENST00000519461 PXDNLA1KZ92 1463 aa20.36■□□□□ 0.85
LINC00599-203ENST00000519461 SURF6O75683 361 aaKnown RBP20.36■□□□□ 0.85
LINC00599-203ENST00000519461 NUTM1Q86Y26 1132 aa20.36■□□□□ 0.85
LINC00599-203ENST00000519461 CD2BP2O95400 341 aaKnown RBP20.35■□□□□ 0.85
LINC00599-203ENST00000519461 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
LINC00599-203ENST00000519461 RBM25P49756 843 aaKnown RBP20.34■□□□□ 0.85
LINC00599-203ENST00000519461 CABP4P57796 275 aa20.34■□□□□ 0.85
LINC00599-203ENST00000519461 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
LINC00599-203ENST00000519461 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
LINC00599-203ENST00000519461 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
LINC00599-203ENST00000519461 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
LINC00599-203ENST00000519461 WDR17Q8IZU2 1322 aa20.34■□□□□ 0.85
LINC00599-203ENST00000519461 MYT1Q01538 1121 aa20.34■□□□□ 0.85
LINC00599-203ENST00000519461 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
LINC00599-203ENST00000519461 C9orf78Q9NZ63 289 aaPredicted RBP20.34■□□□□ 0.85
LINC00599-203ENST00000519461 MAP4K4O95819 1239 aaPredicted RBP20.33■□□□□ 0.85
LINC00599-203ENST00000519461 DEKP35659 375 aaKnown RBP20.33■□□□□ 0.85
LINC00599-203ENST00000519461 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.85
LINC00599-203ENST00000519461 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
LINC00599-203ENST00000519461 DDX21Q9NR30 783 aaKnown RBP eCLIP20.33■□□□□ 0.85
LINC00599-203ENST00000519461 SSH3Q8TE77 659 aa20.33■□□□□ 0.84
LINC00599-203ENST00000519461 PA2G4Q9UQ80 394 aaKnown RBP20.33■□□□□ 0.84
LINC00599-203ENST00000519461 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
LINC00599-203ENST00000519461 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
LINC00599-203ENST00000519461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC00599-203ENST00000519461 COL5A2P05997 1499 aaPredicted RBP20.31■□□□□ 0.84
LINC00599-203ENST00000519461 MX1P20591 662 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 EVA1CP58658 441 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 RIC3Q7Z5B4 369 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 ANTXR1Q9H6X2 564 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 SALL3Q9BXA9 1300 aa20.31■□□□□ 0.84
LINC00599-203ENST00000519461 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
LINC00599-203ENST00000519461 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
LINC00599-203ENST00000519461 IGKV5-2P06315 115 aa20.3■□□□□ 0.84
LINC00599-203ENST00000519461 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
LINC00599-203ENST00000519461 PTCD1O75127 700 aaKnown RBP20.29■□□□□ 0.84
LINC00599-203ENST00000519461 POLA2Q14181 598 aa20.29■□□□□ 0.84
LINC00599-203ENST00000519461 SUCLG2Q96I99 432 aa20.28■□□□□ 0.84
LINC00599-203ENST00000519461 PKD1L3Q7Z443 1732 aa20.28■□□□□ 0.84
LINC00599-203ENST00000519461 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
LINC00599-203ENST00000519461 MYD88Q99836 296 aa20.28■□□□□ 0.84
LINC00599-203ENST00000519461 HSCBQ8IWL3 235 aa20.27■□□□□ 0.84
LINC00599-203ENST00000519461 RHPN1Q8TCX5 695 aa20.27■□□□□ 0.84
LINC00599-203ENST00000519461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.27■□□□□ 0.84
LINC00599-203ENST00000519461 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
LINC00599-203ENST00000519461 KLHDC4Q8TBB5 520 aa20.27■□□□□ 0.84
LINC00599-203ENST00000519461 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 OS9Q13438 667 aaPredicted RBP20.26■□□□□ 0.83
LINC00599-203ENST00000519461 FMNL2Q96PY5 1086 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 OSBPL3Q9H4L5 887 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 BTG4Q9NY30 223 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 ABCA3Q99758 1704 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 KAT6BQ8WYB5 2073 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 IL2RBP14784 551 aa20.26■□□□□ 0.83
LINC00599-203ENST00000519461 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
LINC00599-203ENST00000519461 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
LINC00599-203ENST00000519461 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
LINC00599-203ENST00000519461 GRM8O00222 908 aa20.25■□□□□ 0.83
LINC00599-203ENST00000519461 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
LINC00599-203ENST00000519461 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
LINC00599-203ENST00000519461 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
LINC00599-203ENST00000519461 SIL1Q9H173 461 aa20.24■□□□□ 0.83
LINC00599-203ENST00000519461 PCDH11XQ9BZA7 1347 aa20.24■□□□□ 0.83
LINC00599-203ENST00000519461 PCDH11YQ9BZA8 1340 aa20.24■□□□□ 0.83
LINC00599-203ENST00000519461 EPHA10Q5JZY3 1008 aa20.23■□□□□ 0.83
LINC00599-203ENST00000519461 IL25Q9H293 177 aa20.23■□□□□ 0.83
LINC00599-203ENST00000519461 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
LINC00599-203ENST00000519461 A1BGP04217 495 aa20.23■□□□□ 0.83
LINC00599-203ENST00000519461 HSP90AB1P08238 724 aaKnown RBP20.23■□□□□ 0.83
LINC00599-203ENST00000519461 CARD10Q9BWT7 1032 aa20.23■□□□□ 0.83
LINC00599-203ENST00000519461 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
LINC00599-203ENST00000519461 NBPF26B4DH59 902 aa20.22■□□□□ 0.83
LINC00599-203ENST00000519461 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
LINC00599-203ENST00000519461 NBPF10Q6P3W6 841 aaKnown RBP20.22■□□□□ 0.83
LINC00599-203ENST00000519461 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
LINC00599-203ENST00000519461 NBPF15Q8N660 670 aa20.22■□□□□ 0.83
LINC00599-203ENST00000519461 MRC1P22897 1456 aa20.22■□□□□ 0.83
LINC00599-203ENST00000519461 ABCC6O95255 1503 aa20.21■□□□□ 0.83
LINC00599-203ENST00000519461 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
LINC00599-203ENST00000519461 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
LINC00599-203ENST00000519461 KIF1BPQ96EK5 621 aa20.2■□□□□ 0.82
LINC00599-203ENST00000519461 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
LINC00599-203ENST00000519461 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
LINC00599-203ENST00000519461 PARP4Q9UKK3 1724 aaKnown RBP20.19■□□□□ 0.82
LINC00599-203ENST00000519461 GCKRQ14397 625 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms