RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
PCM1-206ENST00000518537 LRRFIP2Q9Y608 721 aaKnown RBP20.67■□□□□ 0.9
PCM1-206ENST00000518537 ATP8B2P98198 1209 aa20.66■□□□□ 0.9
PCM1-206ENST00000518537 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
PCM1-206ENST00000518537 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
PCM1-206ENST00000518537 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
PCM1-206ENST00000518537 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
PCM1-206ENST00000518537 DDX58O95786 925 aaKnown RBP20.66■□□□□ 0.9
PCM1-206ENST00000518537 NKX1-1Q15270 411 aaPredicted RBP20.66■□□□□ 0.9
PCM1-206ENST00000518537 MAP3K2Q9Y2U5 619 aa20.66■□□□□ 0.9
PCM1-206ENST00000518537 APBB1O00213 710 aa20.65■□□□□ 0.9
PCM1-206ENST00000518537 PDIA6Q15084 440 aa20.65■□□□□ 0.9
PCM1-206ENST00000518537 BMP2KLQ5H9B9 411 aa20.65■□□□□ 0.9
PCM1-206ENST00000518537 PHLPP1O60346 1717 aa20.65■□□□□ 0.9
PCM1-206ENST00000518537 BCL11AQ9H165 835 aa20.64■□□□□ 0.89
PCM1-206ENST00000518537 AIMP1Q12904 312 aaKnown RBP20.63■□□□□ 0.89
PCM1-206ENST00000518537 COL16A1Q07092 1604 aaPredicted RBP20.63■□□□□ 0.89
PCM1-206ENST00000518537 ALDH1L1O75891 902 aa20.62■□□□□ 0.89
PCM1-206ENST00000518537 MYL6BP14649 208 aa20.62■□□□□ 0.89
PCM1-206ENST00000518537 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
PCM1-206ENST00000518537 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
PCM1-206ENST00000518537 PNMA6EA0A0J9YXQ4 647 aa20.62■□□□□ 0.89
PCM1-206ENST00000518537 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
PCM1-206ENST00000518537 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
PCM1-206ENST00000518537 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
PCM1-206ENST00000518537 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
PCM1-206ENST00000518537 EXOC6BQ9Y2D4 811 aa20.6■□□□□ 0.89
PCM1-206ENST00000518537 NBPF7P0C2Y1 421 aaPredicted RBP20.59■□□□□ 0.89
PCM1-206ENST00000518537 XAGE3Q8WTP9 111 aa20.59■□□□□ 0.89
PCM1-206ENST00000518537 C9orf78Q9NZ63 289 aaPredicted RBP20.59■□□□□ 0.89
PCM1-206ENST00000518537 TOM1O60784 492 aa20.58■□□□□ 0.89
PCM1-206ENST00000518537 LINS1Q8NG48 757 aa20.58■□□□□ 0.89
PCM1-206ENST00000518537 GLI3P10071 1580 aa20.58■□□□□ 0.89
PCM1-206ENST00000518537 UBR2Q8IWV8 1755 aa20.58■□□□□ 0.88
PCM1-206ENST00000518537 PAPPAQ13219 1627 aa20.58■□□□□ 0.88
PCM1-206ENST00000518537 MFAP1P55081 439 aaKnown RBP20.58■□□□□ 0.88
PCM1-206ENST00000518537 COPS6Q7L5N1 327 aa20.58■□□□□ 0.88
PCM1-206ENST00000518537 SSH3Q8TE77 659 aa20.58■□□□□ 0.88
PCM1-206ENST00000518537 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.88
PCM1-206ENST00000518537 HDAC5Q9UQL6 1122 aa20.58■□□□□ 0.88
PCM1-206ENST00000518537 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
PCM1-206ENST00000518537 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
PCM1-206ENST00000518537 ANP32EQ9BTT0 268 aa20.57■□□□□ 0.88
PCM1-206ENST00000518537 CWF19L2Q2TBE0 894 aaKnown RBP20.56■□□□□ 0.88
PCM1-206ENST00000518537 TTC22Q5TAA0 569 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 LRRCC1Q9C099 1032 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 DISP2A7MBM2 1401 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 NEXNQ0ZGT2 675 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
PCM1-206ENST00000518537 PLCH1Q4KWH8 1693 aa20.56■□□□□ 0.88
PCM1-206ENST00000518537 IBTKQ9P2D0 1353 aaPredicted RBP20.55■□□□□ 0.88
PCM1-206ENST00000518537 ADAMTS2O95450 1211 aa20.55■□□□□ 0.88
PCM1-206ENST00000518537 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
PCM1-206ENST00000518537 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
PCM1-206ENST00000518537 POLA2Q14181 598 aa20.55■□□□□ 0.88
PCM1-206ENST00000518537 KCPQ6ZWJ8 1503 aa20.55■□□□□ 0.88
PCM1-206ENST00000518537 SRGAP3O43295 1099 aa20.54■□□□□ 0.88
PCM1-206ENST00000518537 GSPT1P15170 499 aaKnown RBP20.54■□□□□ 0.88
PCM1-206ENST00000518537 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
PCM1-206ENST00000518537 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
PCM1-206ENST00000518537 LRP10Q7Z4F1 713 aa20.53■□□□□ 0.88
PCM1-206ENST00000518537 PTCD1O75127 700 aaKnown RBP20.53■□□□□ 0.88
PCM1-206ENST00000518537 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
PCM1-206ENST00000518537 CDC45O75419 566 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 WNK3Q9BYP7 1800 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 TNS2Q63HR2 1409 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 GRM8O00222 908 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 RAB11FIP3O75154 756 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 SURF6O75683 361 aaKnown RBP20.52■□□□□ 0.88
PCM1-206ENST00000518537 MYD88Q99836 296 aa20.52■□□□□ 0.88
PCM1-206ENST00000518537 NUTM2BA6NNL0 878 aaPredicted RBP20.51■□□□□ 0.87
PCM1-206ENST00000518537 NUTM2EB1AL46 878 aaPredicted RBP20.51■□□□□ 0.87
PCM1-206ENST00000518537 EXOC5O00471 708 aa20.51■□□□□ 0.87
PCM1-206ENST00000518537 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
PCM1-206ENST00000518537 NUTM2AQ8IVF1 878 aaPredicted RBP20.51■□□□□ 0.87
PCM1-206ENST00000518537 IGKV5-2P06315 115 aa20.51■□□□□ 0.87
PCM1-206ENST00000518537 UTYO14607 1347 aa20.5■□□□□ 0.87
PCM1-206ENST00000518537 OSBPL3Q9H4L5 887 aa20.5■□□□□ 0.87
PCM1-206ENST00000518537 NRAPQ86VF7 1730 aa20.5■□□□□ 0.87
PCM1-206ENST00000518537 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
PCM1-206ENST00000518537 PDE1AP54750 535 aa20.49■□□□□ 0.87
PCM1-206ENST00000518537 MTX1Q13505 466 aa20.49■□□□□ 0.87
PCM1-206ENST00000518537 ARFGEF2Q9Y6D5 1785 aa20.49■□□□□ 0.87
PCM1-206ENST00000518537 SLC4A3P48751 1232 aa20.49■□□□□ 0.87
PCM1-206ENST00000518537 ITGB4P16144 1822 aa20.49■□□□□ 0.87
PCM1-206ENST00000518537 NBPF26B4DH59 902 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 HSP90AB4PQ58FF6 505 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 NBPF14Q5TI25 921 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 NBPF10Q6P3W6 841 aaKnown RBP20.48■□□□□ 0.87
PCM1-206ENST00000518537 NBPF15Q8N660 670 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 UBAP1LF5GYI3 381 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 EIF5BO60841 1220 aaKnown RBP20.48■□□□□ 0.87
PCM1-206ENST00000518537 PIGBQ92521 554 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
PCM1-206ENST00000518537 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
PCM1-206ENST00000518537 A1BGP04217 495 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms