RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
CPEB4-203ENST00000517880 MRC1P22897 1456 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 KDM6AO15550 1401 aaPredicted RBP13.38□□□□□ -0.27
CPEB4-203ENST00000517880 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
CPEB4-203ENST00000517880 KCNA4P22459 653 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 EVA1CP58658 441 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 ATP8B2P98198 1209 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
CPEB4-203ENST00000517880 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
CPEB4-203ENST00000517880 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
CPEB4-203ENST00000517880 ERVV-2B6SEH9 535 aa13.37□□□□□ -0.27
CPEB4-203ENST00000517880 CYP27B1O15528 508 aa13.37□□□□□ -0.27
CPEB4-203ENST00000517880 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
CPEB4-203ENST00000517880 IL2RBP14784 551 aa13.37□□□□□ -0.27
CPEB4-203ENST00000517880 CABP4P57796 275 aa13.37□□□□□ -0.27
CPEB4-203ENST00000517880 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-203ENST00000517880 NFATC2IPQ8NCF5 419 aa13.37□□□□□ -0.27
CPEB4-203ENST00000517880 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-203ENST00000517880 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-203ENST00000517880 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
CPEB4-203ENST00000517880 TTC5Q8N0Z6 440 aa13.36□□□□□ -0.27
CPEB4-203ENST00000517880 USP44Q9H0E7 712 aa13.36□□□□□ -0.27
CPEB4-203ENST00000517880 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-203ENST00000517880 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
CPEB4-203ENST00000517880 BEND3Q5T5X7 828 aa13.35□□□□□ -0.27
CPEB4-203ENST00000517880 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
CPEB4-203ENST00000517880 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
CPEB4-203ENST00000517880 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
CPEB4-203ENST00000517880 PI4KAP2A4QPH2 592 aa13.34□□□□□ -0.27
CPEB4-203ENST00000517880 PI4KAP1Q8N8J0 262 aa13.34□□□□□ -0.27
CPEB4-203ENST00000517880 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
CPEB4-203ENST00000517880 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
CPEB4-203ENST00000517880 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
CPEB4-203ENST00000517880 SEC24BO95487 1268 aa13.32□□□□□ -0.28
CPEB4-203ENST00000517880 ERBB4Q15303 1308 aa13.32□□□□□ -0.28
CPEB4-203ENST00000517880 COL22A1Q8NFW1 1626 aaPredicted RBP13.32□□□□□ -0.28
CPEB4-203ENST00000517880 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
CPEB4-203ENST00000517880 ADCY9O60503 1353 aa13.32□□□□□ -0.28
CPEB4-203ENST00000517880 BECN1Q14457 450 aa13.31□□□□□ -0.28
CPEB4-203ENST00000517880 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
CPEB4-203ENST00000517880 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
CPEB4-203ENST00000517880 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
CPEB4-203ENST00000517880 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
CPEB4-203ENST00000517880 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
CPEB4-203ENST00000517880 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
CPEB4-203ENST00000517880 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 PDIA6Q15084 440 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
CPEB4-203ENST00000517880 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 TTC22Q5TAA0 569 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
CPEB4-203ENST00000517880 CDC45O75419 566 aa13.29□□□□□ -0.28
CPEB4-203ENST00000517880 NEXNQ0ZGT2 675 aa13.29□□□□□ -0.28
CPEB4-203ENST00000517880 MTX1Q13505 466 aa13.29□□□□□ -0.28
CPEB4-203ENST00000517880 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
CPEB4-203ENST00000517880 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
CPEB4-203ENST00000517880 UTYO14607 1347 aa13.28□□□□□ -0.28
CPEB4-203ENST00000517880 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
CPEB4-203ENST00000517880 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
CPEB4-203ENST00000517880 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
CPEB4-203ENST00000517880 PNMA6EA0A0J9YXQ4 647 aa13.27□□□□□ -0.29
CPEB4-203ENST00000517880 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.29
CPEB4-203ENST00000517880 ANXA1P04083 346 aa13.27□□□□□ -0.29
CPEB4-203ENST00000517880 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
CPEB4-203ENST00000517880 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
CPEB4-203ENST00000517880 CDCA7Q9BWT1 371 aaPredicted RBP13.27□□□□□ -0.29
CPEB4-203ENST00000517880 C5P01031 1676 aa13.26□□□□□ -0.29
CPEB4-203ENST00000517880 RBM25P49756 843 aaKnown RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
CPEB4-203ENST00000517880 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 DDX54Q8TDD1 881 aaKnown RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 METTL22Q9BUU2 404 aaPredicted RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
CPEB4-203ENST00000517880 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
CPEB4-203ENST00000517880 AOX1Q06278 1338 aa13.26□□□□□ -0.29
CPEB4-203ENST00000517880 LAMB4A4D0S4 1761 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 GRM8O00222 908 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 TOM1O60784 492 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
CPEB4-203ENST00000517880 PDE1AP54750 535 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 MYT1Q01538 1121 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 KIF1BPQ96EK5 621 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 STAP2Q9UGK3 403 aa13.25□□□□□ -0.29
CPEB4-203ENST00000517880 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
CPEB4-203ENST00000517880 SMARCA5O60264 1052 aaPredicted RBP13.24□□□□□ -0.29
CPEB4-203ENST00000517880 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
CPEB4-203ENST00000517880 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms