RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 SLC52A2Q9HAB3 445 aa9.52□□□□□ -0.89
SCARNA11.1-201ENST00000516918 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
SCARNA11.1-201ENST00000516918 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ZBTB1Q9Y2K1 713 aa9.52□□□□□ -0.89
SCARNA11.1-201ENST00000516918 RNMTO43148 476 aaKnown RBP9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 SERPINB2P05120 415 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 HMOX1P09601 288 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 CANXP27824 592 aaKnown RBP9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 BICDL1Q6ZP65 573 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 C2CD5Q86YS7 1000 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 TTLL6Q8N841 843 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 NARFQ9UHQ1 456 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ARFGEF1Q9Y6D6 1849 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 WDR90Q96KV7 1748 aa9.51□□□□□ -0.89
SCARNA11.1-201ENST00000516918 GLTPD2A6NH11 291 aa9.5□□□□□ -0.89
SCARNA11.1-201ENST00000516918 VEGFAP15692 232 aaPredicted RBP9.5□□□□□ -0.89
SCARNA11.1-201ENST00000516918 LMNB1P20700 586 aa9.5□□□□□ -0.89
SCARNA11.1-201ENST00000516918 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
SCARNA11.1-201ENST00000516918 TJP1Q07157 1748 aa9.5□□□□□ -0.89
SCARNA11.1-201ENST00000516918 COL15A1P39059 1388 aa9.5□□□□□ -0.89
SCARNA11.1-201ENST00000516918 NFKBIEO00221 500 aa9.49□□□□□ -0.89
SCARNA11.1-201ENST00000516918 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
SCARNA11.1-201ENST00000516918 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
SCARNA11.1-201ENST00000516918 CARMIL3Q8ND23 1372 aa9.49□□□□□ -0.89
SCARNA11.1-201ENST00000516918 H0YIN7 160 aa9.48□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ZNF330Q9Y3S2 320 aaPredicted RBP9.48□□□□□ -0.89
SCARNA11.1-201ENST00000516918 SBF1O95248 1867 aa9.48□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ZC3H4Q9UPT8 1303 aaKnown RBP9.48□□□□□ -0.89
SCARNA11.1-201ENST00000516918 POTECB2RU33 542 aa9.47□□□□□ -0.89
SCARNA11.1-201ENST00000516918 HSPA1AP0DMV8 641 aaKnown RBP9.47□□□□□ -0.89
SCARNA11.1-201ENST00000516918 HSPA1BP0DMV9 641 aaKnown RBP9.47□□□□□ -0.89
SCARNA11.1-201ENST00000516918 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
SCARNA11.1-201ENST00000516918 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
SCARNA11.1-201ENST00000516918 ADAMTS7Q9UKP4 1686 aa9.47□□□□□ -0.89
SCARNA11.1-201ENST00000516918 SCN11AQ9UI33 1791 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 C21orf2O43822 256 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 STARD3NLO95772 234 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 EIF5P55010 431 aaKnown RBP9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 DPY19L2Q6NUT2 758 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 TTC5Q8N0Z6 440 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
SCARNA11.1-201ENST00000516918 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 A0A087WZG4 1122 aa9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 DIAPH1O60610 1272 aaKnown RBP9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CC2D1BQ5T0F9 858 aaKnown RBP9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 PRR5LQ6MZQ0 368 aa9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 ZNF496Q96IT1 587 aaPredicted RBP9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
SCARNA11.1-201ENST00000516918 A1BGP04217 495 aa9.44□□□□□ -0.9
SCARNA11.1-201ENST00000516918 PDE6BP35913 854 aa9.44□□□□□ -0.9
SCARNA11.1-201ENST00000516918 IL17REQ8NFR9 667 aa9.44□□□□□ -0.9
SCARNA11.1-201ENST00000516918 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
SCARNA11.1-201ENST00000516918 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
SCARNA11.1-201ENST00000516918 MRC1P22897 1456 aa9.44□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CLSPNQ9HAW4 1339 aa9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 NPHP1O15259 732 aa9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 DDNO94850 711 aaPredicted RBP9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 TEFQ10587 303 aa9.43□□□□□ -0.9
SCARNA11.1-201ENST00000516918 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 HEG1Q9ULI3 1381 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 KCNQ3O43525 872 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 PIP4K2AP48426 406 aaPredicted RBP9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 ZNF790Q6PG37 636 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CNBD1Q8NA66 436 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 SETDB2Q96T68 719 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 TAOK3Q9H2K8 898 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 GNAT3A8MTJ3 354 aa9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CAMTA2O94983 1202 aa9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 IL6STP40189 918 aaPredicted RBP9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CNKSR1Q969H4 720 aa9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 FMNL2Q96PY5 1086 aa9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
SCARNA11.1-201ENST00000516918 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 SRGNP10124 158 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 ST5P78524 1137 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 STYK1Q6J9G0 422 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 MASTLQ96GX5 879 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 CREBZFQ9NS37 354 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 USP16Q9Y5T5 823 aa9.4□□□□□ -0.9
SCARNA11.1-201ENST00000516918 DLEC1Q9Y238 1755 aa9.4□□□□□ -0.91
SCARNA11.1-201ENST00000516918 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
SCARNA11.1-201ENST00000516918 LTBP3Q9NS15 1303 aa9.39□□□□□ -0.91
SCARNA11.1-201ENST00000516918 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms