RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
SCARNA20.3-201ENST00000516913 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
SCARNA20.3-201ENST00000516913 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
SCARNA20.3-201ENST00000516913 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
SCARNA20.3-201ENST00000516913 CCER1Q8TC90 406 aaPredicted RBP11.31□□□□□ -0.6
SCARNA20.3-201ENST00000516913 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 RASSF7Q02833 373 aa11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 ZNF496Q96IT1 587 aaPredicted RBP11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 NARFQ9UHQ1 456 aa11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
SCARNA20.3-201ENST00000516913 HMGB2P26583 209 aaKnown RBP11.29□□□□□ -0.6
SCARNA20.3-201ENST00000516913 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
SCARNA20.3-201ENST00000516913 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
SCARNA20.3-201ENST00000516913 POTECB2RU33 542 aa11.28□□□□□ -0.6
SCARNA20.3-201ENST00000516913 NFKBIEO00221 500 aa11.28□□□□□ -0.6
SCARNA20.3-201ENST00000516913 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
SCARNA20.3-201ENST00000516913 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 TOMM70O94826 608 aa11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 SERPINB2P05120 415 aa11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 CANXP27824 592 aaKnown RBP11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 PIP4K2AP48426 406 aaPredicted RBP11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 TBC1D9BQ66K14 1250 aa11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 RRAGCQ9HB90 399 aa11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 COL15A1P39059 1388 aa11.27□□□□□ -0.61
SCARNA20.3-201ENST00000516913 A1BGP04217 495 aa11.26□□□□□ -0.61
SCARNA20.3-201ENST00000516913 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
SCARNA20.3-201ENST00000516913 BICDL1Q6ZP65 573 aa11.25□□□□□ -0.61
SCARNA20.3-201ENST00000516913 SLC51AQ86UW1 340 aa11.25□□□□□ -0.61
SCARNA20.3-201ENST00000516913 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
SCARNA20.3-201ENST00000516913 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
SCARNA20.3-201ENST00000516913 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
SCARNA20.3-201ENST00000516913 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
SCARNA20.3-201ENST00000516913 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
SCARNA20.3-201ENST00000516913 ZPR1O75312 459 aa11.24□□□□□ -0.61
SCARNA20.3-201ENST00000516913 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
SCARNA20.3-201ENST00000516913 ZNF790Q6PG37 636 aa11.24□□□□□ -0.61
SCARNA20.3-201ENST00000516913 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
SCARNA20.3-201ENST00000516913 USP16Q9Y5T5 823 aa11.24□□□□□ -0.61
SCARNA20.3-201ENST00000516913 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 NBPF15Q8N660 670 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 NPC1L1Q9UHC9 1359 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 HEG1Q9ULI3 1381 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 SBF1O95248 1867 aa11.23□□□□□ -0.61
SCARNA20.3-201ENST00000516913 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
SCARNA20.3-201ENST00000516913 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
SCARNA20.3-201ENST00000516913 C2CD5Q86YS7 1000 aa11.22□□□□□ -0.61
SCARNA20.3-201ENST00000516913 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 APLP1P51693 650 aa11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 MCM10Q7L590 875 aa11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
SCARNA20.3-201ENST00000516913 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.62
SCARNA20.3-201ENST00000516913 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
SCARNA20.3-201ENST00000516913 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
SCARNA20.3-201ENST00000516913 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
SCARNA20.3-201ENST00000516913 C7orf43Q8WVR3 580 aa11.2□□□□□ -0.62
SCARNA20.3-201ENST00000516913 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
SCARNA20.3-201ENST00000516913 SIPA1L3O60292 1781 aaPredicted RBP11.19□□□□□ -0.62
SCARNA20.3-201ENST00000516913 GLTPD2A6NH11 291 aa11.19□□□□□ -0.62
SCARNA20.3-201ENST00000516913 C21orf2O43822 256 aa11.19□□□□□ -0.62
SCARNA20.3-201ENST00000516913 LMNB1P20700 586 aa11.19□□□□□ -0.62
SCARNA20.3-201ENST00000516913 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
SCARNA20.3-201ENST00000516913 VIRMAQ69YN4 1812 aaKnown RBP11.19□□□□□ -0.62
SCARNA20.3-201ENST00000516913 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
SCARNA20.3-201ENST00000516913 STARD3NLO95772 234 aa11.18□□□□□ -0.62
SCARNA20.3-201ENST00000516913 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
SCARNA20.3-201ENST00000516913 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
SCARNA20.3-201ENST00000516913 BRIP1Q9BX63 1249 aa11.18□□□□□ -0.62
SCARNA20.3-201ENST00000516913 HLFQ16534 295 aa11.17□□□□□ -0.62
SCARNA20.3-201ENST00000516913 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
SCARNA20.3-201ENST00000516913 KLRG2A4D1S0 409 aaPredicted RBP11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 H0YIN7 160 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 SRGNP10124 158 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 TEFQ10587 303 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 FSTL1Q12841 308 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 TTC5Q8N0Z6 440 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 GAS2L2Q8NHY3 880 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 ZNF622Q969S3 477 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 FMNL2Q96PY5 1086 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
SCARNA20.3-201ENST00000516913 DLEC1Q9Y238 1755 aa11.15□□□□□ -0.62
SCARNA20.3-201ENST00000516913 WDR90Q96KV7 1748 aa11.15□□□□□ -0.63
SCARNA20.3-201ENST00000516913 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 DDNO94850 711 aaPredicted RBP11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 PLEKHF1Q96S99 279 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms