RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 LMBRD1Q9NUN5 540 aa4.06□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 USP25Q9UHP3 1055 aa4.06□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 KIF3AQ9Y496 699 aa4.06□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CAMTA1Q9Y6Y1 1673 aa4.06□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MYH15Q9Y2K3 1946 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ADAMTS13Q76LX8 1427 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SPEF2Q9C093 1822 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 RGPD8O14715 1765 aaPredicted RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ACEP12821 1306 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 USP42Q9H9J4 1324 aaKnown RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MARF1Q9Y4F3 1742 aaKnown RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ELL2O00472 640 aaPredicted RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 PRPF40AO75400 957 aaKnown RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 HSPA4P34932 840 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ATP8B2P98198 1209 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 RRS1Q15050 365 aaKnown RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SLC4A10Q6U841 1118 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 WAPLQ7Z5K2 1190 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MEIS3Q99687 375 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 TM6SF1Q9BZW5 370 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 HMG20BQ9P0W2 317 aa4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ZNF142P52746 1687 aaPredicted RBP4.05□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ROBO2Q9HCK4 1378 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ELP1O95163 1332 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SALL3Q9BXA9 1300 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SYCE3A1L190 88 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 NRDCO43847 1150 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ALDH1L1O75891 902 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 PLEKHG5O94827 1062 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CD2BP2O95400 341 aaKnown RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 DDX58O95786 925 aaKnown RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CCDC192P0DO97 292 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CHMLP26374 656 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 KRT85P78386 507 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 FAM69CQ0P6D2 419 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 KRT32Q14532 448 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 TAF7Q15545 349 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 AMOTQ4VCS5 1084 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 DNTTIP2Q5QJE6 756 aaKnown RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 HDGFL1Q5TGJ6 251 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 VPS53Q5VIR6 699 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 FBXO31Q5XUX0 539 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 TXNDC2Q86VQ3 553 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CLASRPQ8N2M8 674 aaKnown RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 KCNH5Q8NCM2 988 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 NGDNQ8NEJ9 315 aaKnown RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SSH3Q8TE77 659 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 RILPL2Q969X0 211 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 THUMPD2Q9BTF0 503 aaKnown RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SCAND2PQ9GZW5 306 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 FOXD4L1Q9NU39 408 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 LIMCH1Q9UPQ0 1083 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SMC3Q9UQE7 1217 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 TBX22Q9Y458 520 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SLIT3O75094 1523 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 LAMB4A4D0S4 1761 aa4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SIPA1L3O60292 1781 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ADAMTS7Q9UKP4 1686 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CEMIPQ8WUJ3 1361 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MAP3K19Q56UN5 1328 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 NWD1Q149M9 1564 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 UQCRHLA0A096LP55 91 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 FAM83GA6ND36 823 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 GOLGA6L4A6NEF3 574 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 SGSM2O43147 1006 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 STX6O43752 255 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 NEMFO60524 1076 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 UQCRHP07919 91 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ZSCAN22P10073 491 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 PRIM1P49642 420 aaKnown RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 OS9Q13438 667 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MTX1Q13505 466 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 LRRFIP1Q32MZ4 808 aaKnown RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ATL3Q6DD88 541 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MCM10Q7L590 875 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 GAS2L3Q86XJ1 694 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 THEMISQ8N1K5 641 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 PIBF1Q8WXW3 757 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 EVI5LQ96CN4 794 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 DDX19AQ9NUU7 478 aaKnown RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 DBF4Q9UBU7 674 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 CYP46A1Q9Y6A2 500 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 PARP4Q9UKK3 1724 aaKnown RBP4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 MRC1P22897 1456 aa4.03□□□□□ -1.76
RNU4ATAC3P-201ENST00000516699 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 AFDNP55196 1824 aaKnown RBP4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SCN11AQ9UI33 1791 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ERBB4Q15303 1308 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 NPHP3Q7Z494 1330 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PRR36Q9H6K5 1346 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KIF2AO00139 706 aaPredicted RBP4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 APBB1O00213 710 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CTAGE5O15320 804 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SRGAP3O43295 1099 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 F13A1P00488 732 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 TUBB4AP04350 444 aa4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 HMGB1P09429 215 aaKnown RBP4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 IFIT2P09913 472 aaKnown RBP4.02□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 GTF2F1P35269 517 aaKnown RBP eCLIP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms