RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
TRIM41-209ENST00000515834 MMRN2Q9H8L6 949 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC194A0A1B0GVG4 234 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 K7ELQ4 463 aaPredicted RBP12.81□□□□□ -0.36
TRIM41-209ENST00000515834 SPA17Q15506 151 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 NUP62CLQ9H1M0 184 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 NBPF5PQ86XG9 351 aaPredicted RBP12.81□□□□□ -0.36
TRIM41-209ENST00000515834 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
TRIM41-209ENST00000515834 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
TRIM41-209ENST00000515834 CATIPQ7Z7H3 387 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
TRIM41-209ENST00000515834 SMTNL1A8MU46 457 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
TRIM41-209ENST00000515834 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 A0A087WZG4 1122 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 KIF1BPQ96EK5 621 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
TRIM41-209ENST00000515834 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
TRIM41-209ENST00000515834 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 ARHGAP29Q52LW3 1261 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
TRIM41-209ENST00000515834 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 ANKRD30BQ9BXX2 1392 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
TRIM41-209ENST00000515834 GOLGA8AA7E2F4 631 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 GOLGA8BA8MQT2 603 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 BAG3O95817 575 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 PPP1R42Q7Z4L9 355 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 FCHSD2O94868 740 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 HOOK3Q86VS8 718 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 ERLIN1O75477 346 aa12.79□□□□□ -0.36
TRIM41-209ENST00000515834 F6X3S4 739 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 NME9Q86XW9 330 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC148Q8NFR7 591 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 KAT14Q9H8E8 782 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
TRIM41-209ENST00000515834 PICALMQ13492 652 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 TDRD12Q587J7 1177 aaKnown RBP12.78□□□□□ -0.36
TRIM41-209ENST00000515834 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 PRC1O43663 620 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 PDE3AQ14432 1141 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 KIF20AO95235 890 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 POLD1P28340 1107 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 LDHAL6AQ6ZMR3 332 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
TRIM41-209ENST00000515834 LRPPRCP42704 1394 aaKnown RBP12.77□□□□□ -0.36
TRIM41-209ENST00000515834 RNF41Q9H4P4 317 aaPredicted RBP12.77□□□□□ -0.36
TRIM41-209ENST00000515834 RAB11FIP4Q86YS3 637 aa12.77□□□□□ -0.36
TRIM41-209ENST00000515834 TMX1Q9H3N1 280 aa12.77□□□□□ -0.36
TRIM41-209ENST00000515834 LDHCP07864 332 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.37
TRIM41-209ENST00000515834 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
TRIM41-209ENST00000515834 SSX2IPQ9Y2D8 614 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 LMAN1P49257 510 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 NAIPQ13075 1403 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 STAMBPO95630 424 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 NF2P35240 595 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 RBM10P98175 930 aaKnown RBP12.77□□□□□ -0.37
TRIM41-209ENST00000515834 OGFOD1Q8N543 542 aa12.77□□□□□ -0.37
TRIM41-209ENST00000515834 IDEP14735 1019 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 CALML4Q96GE6 196 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 GLRX3O76003 335 aaKnown RBP12.76□□□□□ -0.37
TRIM41-209ENST00000515834 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
TRIM41-209ENST00000515834 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM41-209ENST00000515834 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 MX1P20591 662 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 PDE4BQ07343 736 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 CFTRP13569 1480 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 GOLIM4O00461 696 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 EIF3JO75822 258 aaKnown RBP12.76□□□□□ -0.37
TRIM41-209ENST00000515834 FGFR1OPO95684 399 aaKnown RBP12.76□□□□□ -0.37
TRIM41-209ENST00000515834 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
TRIM41-209ENST00000515834 TOM1O60784 492 aa12.76□□□□□ -0.37
TRIM41-209ENST00000515834 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms