RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 IBTKQ9P2D0 1353 aaPredicted RBP16.15■□□□□ 0.18
SH3TC1-225ENST00000515682 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
SH3TC1-225ENST00000515682 ADCY10Q96PN6 1610 aa16.15■□□□□ 0.18
SH3TC1-225ENST00000515682 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.18
SH3TC1-225ENST00000515682 AIMP1Q12904 312 aaKnown RBP16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 V9GYY5 206 aaPredicted RBP16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 BRD1O95696 1058 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 PTGS1P23219 599 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 NECAB1Q8N987 351 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 RIOK3O14730 519 aaKnown RBP16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 TRERF1Q96PN7 1200 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 KDM4AO75164 1064 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 RNF20Q5VTR2 975 aa16.14■□□□□ 0.17
SH3TC1-225ENST00000515682 MSH6P52701 1360 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 PDCP20941 246 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 CADPS2Q86UW7 1296 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 DDIT3P35638 169 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 TPM4P67936 248 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
SH3TC1-225ENST00000515682 TCEANC2Q96MN5 208 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 SDF4Q9BRK5 362 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 CHMLP26374 656 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 LTKP29376 864 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
SH3TC1-225ENST00000515682 CCDC66A2RUB6 948 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 CLIP2Q9UDT6 1046 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 ABCC4O15439 1325 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 PTPRCP08575 1304 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 SYT1P21579 422 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 G2E3Q7L622 706 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 F13A1P00488 732 aa16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 INTS4Q96HW7 963 aaKnown RBP16.11■□□□□ 0.17
SH3TC1-225ENST00000515682 AK2P54819 239 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 SMC2O95347 1197 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 FLIIQ13045 1269 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 CFAP74Q9C0B2 1584 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 RAB11FIP3O75154 756 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
SH3TC1-225ENST00000515682 ANAPC15P60006 121 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 PSMA5P28066 241 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 ZNF165P49910 485 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 PTPN14Q15678 1187 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
SH3TC1-225ENST00000515682 SIL1Q9H173 461 aa16.08■□□□□ 0.17
SH3TC1-225ENST00000515682 ANO6Q4KMQ2 910 aa16.08■□□□□ 0.16
SH3TC1-225ENST00000515682 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
SH3TC1-225ENST00000515682 RIC3Q7Z5B4 369 aa16.08■□□□□ 0.16
SH3TC1-225ENST00000515682 GTPBP4Q9BZE4 634 aaKnown RBP16.08■□□□□ 0.16
SH3TC1-225ENST00000515682 DACT1Q9NYF0 836 aa16.08■□□□□ 0.16
SH3TC1-225ENST00000515682 TMEM2Q9UHN6 1383 aa16.08■□□□□ 0.16
SH3TC1-225ENST00000515682 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
SH3TC1-225ENST00000515682 FAM200AQ8TCP9 573 aa16.07■□□□□ 0.16
SH3TC1-225ENST00000515682 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
SH3TC1-225ENST00000515682 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
SH3TC1-225ENST00000515682 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
SH3TC1-225ENST00000515682 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
SH3TC1-225ENST00000515682 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
SH3TC1-225ENST00000515682 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
SH3TC1-225ENST00000515682 AACSQ86V21 672 aa16.06■□□□□ 0.16
SH3TC1-225ENST00000515682 GNAT3A8MTJ3 354 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 PYCARDQ9ULZ3 195 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 TYRO3Q06418 890 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 TEX35Q5T0J7 233 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 ME1P48163 572 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 CABP4P57796 275 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 CLEC17AQ6ZS10 378 aa16.05■□□□□ 0.16
SH3TC1-225ENST00000515682 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
SH3TC1-225ENST00000515682 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
SH3TC1-225ENST00000515682 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
SH3TC1-225ENST00000515682 CHRNA2Q15822 529 aa16.03■□□□□ 0.16
SH3TC1-225ENST00000515682 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
SH3TC1-225ENST00000515682 GLRX3O76003 335 aaKnown RBP16.03■□□□□ 0.16
SH3TC1-225ENST00000515682 DMTNQ08495 405 aa16.03■□□□□ 0.16
SH3TC1-225ENST00000515682 LRMPQ12912 555 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms