RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 NFIXQ14938 502 aa16.44■□□□□ 0.22
CSF1R-208ENST00000515239 USPL1Q5W0Q7 1092 aa16.44■□□□□ 0.22
CSF1R-208ENST00000515239 NFATC2IPQ8NCF5 419 aa16.44■□□□□ 0.22
CSF1R-208ENST00000515239 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
CSF1R-208ENST00000515239 ZPR1O75312 459 aa16.43■□□□□ 0.22
CSF1R-208ENST00000515239 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
CSF1R-208ENST00000515239 PCDH10Q9P2E7 1040 aa16.43■□□□□ 0.22
CSF1R-208ENST00000515239 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
CSF1R-208ENST00000515239 SERPINB2P05120 415 aa16.42■□□□□ 0.22
CSF1R-208ENST00000515239 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
CSF1R-208ENST00000515239 VEGFBP49765 207 aa16.41■□□□□ 0.22
CSF1R-208ENST00000515239 LBX1P52954 281 aa16.41■□□□□ 0.22
CSF1R-208ENST00000515239 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
CSF1R-208ENST00000515239 ABHD8Q96I13 439 aa16.41■□□□□ 0.22
CSF1R-208ENST00000515239 WBP1LQ9NX94 342 aa16.41■□□□□ 0.22
CSF1R-208ENST00000515239 PASKQ96RG2 1323 aa16.41■□□□□ 0.22
CSF1R-208ENST00000515239 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
CSF1R-208ENST00000515239 H0YIN7 160 aa16.4■□□□□ 0.22
CSF1R-208ENST00000515239 MTHFSP49914 203 aa16.4■□□□□ 0.22
CSF1R-208ENST00000515239 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
CSF1R-208ENST00000515239 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
CSF1R-208ENST00000515239 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
CSF1R-208ENST00000515239 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
CSF1R-208ENST00000515239 NARFQ9UHQ1 456 aa16.4■□□□□ 0.22
CSF1R-208ENST00000515239 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
CSF1R-208ENST00000515239 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
CSF1R-208ENST00000515239 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
CSF1R-208ENST00000515239 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
CSF1R-208ENST00000515239 TJP1Q07157 1748 aa16.39■□□□□ 0.21
CSF1R-208ENST00000515239 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
CSF1R-208ENST00000515239 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
CSF1R-208ENST00000515239 C21orf2O43822 256 aa16.37■□□□□ 0.21
CSF1R-208ENST00000515239 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
CSF1R-208ENST00000515239 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
CSF1R-208ENST00000515239 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
CSF1R-208ENST00000515239 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
CSF1R-208ENST00000515239 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
CSF1R-208ENST00000515239 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
CSF1R-208ENST00000515239 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
CSF1R-208ENST00000515239 RGS19P49795 217 aa16.35■□□□□ 0.21
CSF1R-208ENST00000515239 LDHDQ86WU2 507 aa16.35■□□□□ 0.21
CSF1R-208ENST00000515239 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
CSF1R-208ENST00000515239 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
CSF1R-208ENST00000515239 LTBP3Q9NS15 1303 aa16.34■□□□□ 0.21
CSF1R-208ENST00000515239 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
CSF1R-208ENST00000515239 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
CSF1R-208ENST00000515239 MLLT1Q03111 559 aaPredicted RBP16.33■□□□□ 0.2
CSF1R-208ENST00000515239 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
CSF1R-208ENST00000515239 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
CSF1R-208ENST00000515239 COL15A1P39059 1388 aa16.33■□□□□ 0.2
CSF1R-208ENST00000515239 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.2
CSF1R-208ENST00000515239 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
CSF1R-208ENST00000515239 L3MBTL3Q96JM7 780 aaPredicted RBP16.32■□□□□ 0.2
CSF1R-208ENST00000515239 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
CSF1R-208ENST00000515239 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
CSF1R-208ENST00000515239 IQCA1LA6NCM1 817 aa16.31■□□□□ 0.2
CSF1R-208ENST00000515239 RASSF10A6NK89 507 aa16.31■□□□□ 0.2
CSF1R-208ENST00000515239 DEFB115Q30KQ5 88 aa16.31■□□□□ 0.2
CSF1R-208ENST00000515239 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
CSF1R-208ENST00000515239 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
CSF1R-208ENST00000515239 PDE6BP35913 854 aa16.3■□□□□ 0.2
CSF1R-208ENST00000515239 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
CSF1R-208ENST00000515239 CCDC85CA6NKD9 419 aa16.29■□□□□ 0.2
CSF1R-208ENST00000515239 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
CSF1R-208ENST00000515239 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
CSF1R-208ENST00000515239 CCDC24Q8N4L8 307 aa16.29■□□□□ 0.2
CSF1R-208ENST00000515239 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
CSF1R-208ENST00000515239 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
CSF1R-208ENST00000515239 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
CSF1R-208ENST00000515239 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
CSF1R-208ENST00000515239 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
CSF1R-208ENST00000515239 SCN4AP35499 1836 aa16.27■□□□□ 0.2
CSF1R-208ENST00000515239 CANXP27824 592 aaKnown RBP16.27■□□□□ 0.2
CSF1R-208ENST00000515239 EAPPQ56P03 285 aaPredicted RBP16.27■□□□□ 0.2
CSF1R-208ENST00000515239 PRR5LQ6MZQ0 368 aa16.27■□□□□ 0.2
CSF1R-208ENST00000515239 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
CSF1R-208ENST00000515239 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
CSF1R-208ENST00000515239 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
CSF1R-208ENST00000515239 SLX4Q8IY92 1834 aa16.26■□□□□ 0.19
CSF1R-208ENST00000515239 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
CSF1R-208ENST00000515239 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
CSF1R-208ENST00000515239 C7orf43Q8WVR3 580 aa16.25■□□□□ 0.19
CSF1R-208ENST00000515239 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
CSF1R-208ENST00000515239 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
CSF1R-208ENST00000515239 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
CSF1R-208ENST00000515239 SRGNP10124 158 aa16.24■□□□□ 0.19
CSF1R-208ENST00000515239 AKAP4Q5JQC9 854 aa16.24■□□□□ 0.19
CSF1R-208ENST00000515239 MAP1SQ66K74 1059 aaPredicted RBP16.24■□□□□ 0.19
CSF1R-208ENST00000515239 STYK1Q6J9G0 422 aa16.24■□□□□ 0.19
CSF1R-208ENST00000515239 PRPF40BQ6NWY9 871 aaKnown RBP16.24■□□□□ 0.19
CSF1R-208ENST00000515239 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
CSF1R-208ENST00000515239 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
CSF1R-208ENST00000515239 EPHX2P34913 555 aa16.23■□□□□ 0.19
CSF1R-208ENST00000515239 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
CSF1R-208ENST00000515239 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
CSF1R-208ENST00000515239 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
CSF1R-208ENST00000515239 A0A087WZG4 1122 aa16.22■□□□□ 0.19
CSF1R-208ENST00000515239 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
CSF1R-208ENST00000515239 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
CSF1R-208ENST00000515239 ABT1Q9ULW3 272 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms