RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 RSPH6AQ9H0K4 717 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 PA2G4Q9UQ80 394 aaKnown RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 AKAP2Q9Y2D5 859 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 SMC2O95347 1197 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 HDAC1Q13547 482 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 TTC22Q5TAA0 569 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 TNMDQ9H2S6 317 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 CIZ1Q9ULV3 898 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 CEP170Q5SW79 1584 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 BRPF1P55201 1214 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 NAT10Q9H0A0 1025 aaKnown RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 CWC25Q9NXE8 425 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 CWF19L2Q2TBE0 894 aaKnown RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 ZSCAN29Q8IWY8 852 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 PUS7Q96PZ0 661 aaKnown RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 C19orf44Q9H6X5 657 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 PHAXQ9H814 394 aaKnown RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 GDPD2Q9HCC8 539 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 R3HCC1Q9Y3T6 440 aaKnown RBP7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 NPHP3Q7Z494 1330 aa7.3□□□□□ -1.24
ATP2C1-222ENST00000514654 ANKRD18BA2A2Z9 1011 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 HOXC9P31274 260 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 FLT4P35916 1363 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 MSH6P52701 1360 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 DDX46Q7L014 1031 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 G2E3Q7L622 706 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ANKRD44Q8N8A2 993 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 TCEANC2Q96MN5 208 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ZNF652Q9Y2D9 606 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 TBX22Q9Y458 520 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 U3KPZ7 1027 aaPredicted RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ABCC1P33527 1531 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 HAND2P61296 217 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 AKAP4Q5JQC9 854 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 TTLL5Q6EMB2 1281 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 RAB11FIP4Q86YS3 637 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 DDX17Q92841 729 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 GRPEL1Q9HAV7 217 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ZNF219Q9P2Y4 722 aaPredicted RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 CFAP65Q6ZU64 1925 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ARHGEF12Q9NZN5 1544 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 COL17A1Q9UMD9 1497 aaPredicted RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 SYCE3A1L190 88 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 CCT2P78371 535 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 CAMK4Q16566 473 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 TBC1D32Q96NH3 1257 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ANKIB1Q9P2G1 1089 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 ADGRL2O95490 1459 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 SF3B2Q13435 895 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 LMBR1LQ6UX01 489 aa7.29□□□□□ -1.24
ATP2C1-222ENST00000514654 PDE1AP54750 535 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 TNPO1Q92973 898 aaKnown RBP7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 NAPBQ9H115 298 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 PIK3C2GO75747 1445 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 A0A0U1RQG5 324 aaPredicted RBP7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 LETM1O95202 739 aaPredicted RBP7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 CCDC192P0DO97 292 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 IL13P35225 146 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 CCDC39Q9UFE4 941 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 SAMD9Q5K651 1589 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 ATP7AQ04656 1500 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 LTKP29376 864 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 CAVIN4Q5BKX8 364 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 KSR2Q6VAB6 950 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 JMYQ8N9B5 988 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 EVI5LQ96CN4 794 aa7.28□□□□□ -1.24
ATP2C1-222ENST00000514654 GRM8O00222 908 aa7.27□□□□□ -1.24
ATP2C1-222ENST00000514654 ATP8B2P98198 1209 aa7.27□□□□□ -1.24
ATP2C1-222ENST00000514654 HSP90AB3PQ58FF7 597 aa7.27□□□□□ -1.24
ATP2C1-222ENST00000514654 ZBTB40Q9NUA8 1239 aa7.27□□□□□ -1.24
ATP2C1-222ENST00000514654 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.24
ATP2C1-222ENST00000514654 SEC24BO95487 1268 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 NAP1L1P55209 391 aaKnown RBP7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 SLC4A8Q2Y0W8 1093 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 C8orf34Q49A92 452 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 TFIP11Q9UBB9 837 aaKnown RBP7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 LIMCH1Q9UPQ0 1083 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 MAP3K12Q12852 859 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 LGR6Q9HBX8 967 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 RANBP6O60518 1105 aaKnown RBP7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 CEP85Q6P2H3 762 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 IP6K1Q92551 441 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 CDK5RAP3Q96JB5 506 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 LRRC2Q9BYS8 371 aa7.27□□□□□ -1.25
ATP2C1-222ENST00000514654 ZNF213O14771 459 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 SLC5A1P13866 664 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 USP5P45974 858 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 CCDC144CPQ8IYA2 1237 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 GOLGA6L1Q8N7Z2 621 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 NUP62CLQ9H1M0 184 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 CFAP45Q9UL16 551 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 UBAP1LF5GYI3 381 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 CDKL5O76039 1030 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 TXLNAP40222 546 aa7.26□□□□□ -1.25
ATP2C1-222ENST00000514654 ZHX3Q9H4I2 956 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms