RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TTLL6Q8N841 843 aa15.1■□□□□ 0.01
DDX41-216ENST00000513562 AEBP1Q8IUX7 1158 aa15.09■□□□□ 0.01
DDX41-216ENST00000513562 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
DDX41-216ENST00000513562 SBF1O95248 1867 aa15.09■□□□□ 0.01
DDX41-216ENST00000513562 NARFQ9UHQ1 456 aa15.08■□□□□ 0
DDX41-216ENST00000513562 NRXN2Q9P2S2 1712 aa15.07■□□□□ 0
DDX41-216ENST00000513562 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
DDX41-216ENST00000513562 CREBZFQ9NS37 354 aa15.07■□□□□ 0
DDX41-216ENST00000513562 COL15A1P39059 1388 aa15.07■□□□□ 0
DDX41-216ENST00000513562 CARMIL3Q8ND23 1372 aa15.07■□□□□ 0
DDX41-216ENST00000513562 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
DDX41-216ENST00000513562 SERPINB2P05120 415 aa15.06■□□□□ 0
DDX41-216ENST00000513562 C2CD5Q86YS7 1000 aa15.06■□□□□ 0
DDX41-216ENST00000513562 BCL2L12Q9HB09 334 aa15.06■□□□□ 0
DDX41-216ENST00000513562 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
DDX41-216ENST00000513562 SLC52A2Q9HAB3 445 aa15.05■□□□□ -0
DDX41-216ENST00000513562 ZBTB1Q9Y2K1 713 aa15.05■□□□□ -0
DDX41-216ENST00000513562 DLEC1Q9Y238 1755 aa15.05■□□□□ -0
DDX41-216ENST00000513562 MRC1P22897 1456 aa15.04■□□□□ -0
DDX41-216ENST00000513562 H0YIN7 160 aa15.04■□□□□ -0
DDX41-216ENST00000513562 CHADLQ6NUI6 762 aa15.04■□□□□ -0
DDX41-216ENST00000513562 MKRN1Q9UHC7 482 aaKnown RBP15.04■□□□□ -0
DDX41-216ENST00000513562 AKAP4Q5JQC9 854 aa15.03■□□□□ -0
DDX41-216ENST00000513562 SULT6B1Q6IMI4 303 aa15.03■□□□□ -0
DDX41-216ENST00000513562 CNTNAP1P78357 1384 aa15.02■□□□□ -0
DDX41-216ENST00000513562 FOXN1O15353 648 aa15.02■□□□□ -0
DDX41-216ENST00000513562 ERFEQ4G0M1 354 aa15.02■□□□□ -0
DDX41-216ENST00000513562 PRDM10Q9NQV6 1147 aa15.02■□□□□ -0
DDX41-216ENST00000513562 LTBP3Q9NS15 1303 aa15.01□□□□□ -0.01
DDX41-216ENST00000513562 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
DDX41-216ENST00000513562 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
DDX41-216ENST00000513562 SLC39A6Q13433 755 aa15.01□□□□□ -0.01
DDX41-216ENST00000513562 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
DDX41-216ENST00000513562 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
DDX41-216ENST00000513562 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
DDX41-216ENST00000513562 C21orf2O43822 256 aa15□□□□□ -0.01
DDX41-216ENST00000513562 LGR6Q9HBX8 967 aa15□□□□□ -0.01
DDX41-216ENST00000513562 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
DDX41-216ENST00000513562 SLC34A2O95436 690 aa14.99□□□□□ -0.01
DDX41-216ENST00000513562 IL13P35225 146 aa14.99□□□□□ -0.01
DDX41-216ENST00000513562 ZNF622Q969S3 477 aaKnown RBP eCLIP14.99□□□□□ -0.012e-9■■■□□ 14.7
DDX41-216ENST00000513562 POLR3GLQ9BT43 218 aa14.99□□□□□ -0.01
DDX41-216ENST00000513562 BRIP1Q9BX63 1249 aa14.99□□□□□ -0.01
DDX41-216ENST00000513562 TAOK3Q9H2K8 898 aa14.99□□□□□ -0.01
DDX41-216ENST00000513562 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
DDX41-216ENST00000513562 RNMTO43148 476 aaKnown RBP14.98□□□□□ -0.01
DDX41-216ENST00000513562 DDNO94850 711 aaPredicted RBP14.98□□□□□ -0.01
DDX41-216ENST00000513562 PDE6BP35913 854 aa14.98□□□□□ -0.01
DDX41-216ENST00000513562 EIF5P55010 431 aaKnown RBP14.98□□□□□ -0.01
DDX41-216ENST00000513562 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
DDX41-216ENST00000513562 CANXP27824 592 aaKnown RBP14.97□□□□□ -0.01
DDX41-216ENST00000513562 CTCFP49711 727 aaPredicted RBP14.97□□□□□ -0.01
DDX41-216ENST00000513562 TBC1D9BQ66K14 1250 aa14.97□□□□□ -0.01
DDX41-216ENST00000513562 PRR5LQ6MZQ0 368 aa14.97□□□□□ -0.01
DDX41-216ENST00000513562 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
DDX41-216ENST00000513562 PANK3Q9H999 370 aa14.97□□□□□ -0.01
DDX41-216ENST00000513562 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
DDX41-216ENST00000513562 A0A087WZG4 1122 aa14.96□□□□□ -0.01
DDX41-216ENST00000513562 IQCA1LA6NCM1 817 aa14.96□□□□□ -0.01
DDX41-216ENST00000513562 MORC1Q86VD1 984 aa14.96□□□□□ -0.01
DDX41-216ENST00000513562 AIDAQ96BJ3 306 aa14.96□□□□□ -0.01
DDX41-216ENST00000513562 L3MBTL3Q96JM7 780 aaPredicted RBP14.96□□□□□ -0.01
DDX41-216ENST00000513562 STARD3NLO95772 234 aa14.95□□□□□ -0.02
DDX41-216ENST00000513562 VEGFBP49765 207 aa14.95□□□□□ -0.02
DDX41-216ENST00000513562 COL11A2P13942 1736 aaPredicted RBP14.95□□□□□ -0.02
DDX41-216ENST00000513562 SOGA3Q5TF21 947 aa14.94□□□□□ -0.02
DDX41-216ENST00000513562 PRPF40BQ6NWY9 871 aaKnown RBP14.94□□□□□ -0.02
DDX41-216ENST00000513562 CCDC24Q8N4L8 307 aa14.94□□□□□ -0.02
DDX41-216ENST00000513562 CNKSR1Q969H4 720 aa14.94□□□□□ -0.02
DDX41-216ENST00000513562 TAF1DQ9H5J8 278 aaPredicted RBP14.94□□□□□ -0.02
DDX41-216ENST00000513562 WBP1LQ9NX94 342 aa14.94□□□□□ -0.02
DDX41-216ENST00000513562 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
DDX41-216ENST00000513562 TMEM88BA6NKF7 163 aa14.93□□□□□ -0.02
DDX41-216ENST00000513562 ITGBL1O95965 494 aaPredicted RBP14.93□□□□□ -0.02
DDX41-216ENST00000513562 STYK1Q6J9G0 422 aa14.93□□□□□ -0.02
DDX41-216ENST00000513562 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
DDX41-216ENST00000513562 ANKRD31Q8N7Z5 1873 aa14.93□□□□□ -0.02
DDX41-216ENST00000513562 SRGNP10124 158 aa14.92□□□□□ -0.02
DDX41-216ENST00000513562 LBX1P52954 281 aa14.92□□□□□ -0.02
DDX41-216ENST00000513562 MTHFSDQ2M296 383 aaKnown RBP14.92□□□□□ -0.02
DDX41-216ENST00000513562 CNBD1Q8NA66 436 aa14.92□□□□□ -0.02
DDX41-216ENST00000513562 UBR2Q8IWV8 1755 aa14.91□□□□□ -0.02
DDX41-216ENST00000513562 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
DDX41-216ENST00000513562 MASTLQ96GX5 879 aa14.91□□□□□ -0.02
DDX41-216ENST00000513562 TBC1D2BQ9UPU7 963 aa14.91□□□□□ -0.02
DDX41-216ENST00000513562 HEG1Q9ULI3 1381 aa14.9□□□□□ -0.02
DDX41-216ENST00000513562 RASSF10A6NK89 507 aa14.9□□□□□ -0.02
DDX41-216ENST00000513562 HMOX1P09601 288 aa14.9□□□□□ -0.02
DDX41-216ENST00000513562 HSPA8P11142 646 aaKnown RBP14.9□□□□□ -0.02
DDX41-216ENST00000513562 IL6STP40189 918 aaPredicted RBP14.9□□□□□ -0.02
DDX41-216ENST00000513562 ST5P78524 1137 aa14.9□□□□□ -0.02
DDX41-216ENST00000513562 ZNF496Q96IT1 587 aaPredicted RBP14.9□□□□□ -0.02
DDX41-216ENST00000513562 TIMELESSQ9UNS1 1208 aa14.9□□□□□ -0.02
DDX41-216ENST00000513562 DICER1Q9UPY3 1922 aaKnown RBP14.9□□□□□ -0.02
DDX41-216ENST00000513562 CCDC88AQ3V6T2 1871 aa14.89□□□□□ -0.03
DDX41-216ENST00000513562 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
DDX41-216ENST00000513562 C7orf43Q8WVR3 580 aa14.89□□□□□ -0.03
DDX41-216ENST00000513562 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
DDX41-216ENST00000513562 SETDB2Q96T68 719 aa14.89□□□□□ -0.03
DDX41-216ENST00000513562 TEX13AQ9BXU3 409 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms