RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
CLOCK-211ENST00000513440 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
CLOCK-211ENST00000513440 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
CLOCK-211ENST00000513440 ANKRD24Q8TF21 1146 aa17.13■□□□□ 0.33
CLOCK-211ENST00000513440 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
CLOCK-211ENST00000513440 NWD1Q149M9 1564 aa17.13■□□□□ 0.33
CLOCK-211ENST00000513440 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
CLOCK-211ENST00000513440 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
CLOCK-211ENST00000513440 CWC27Q6UX04 472 aaKnown RBP17.12■□□□□ 0.33
CLOCK-211ENST00000513440 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
CLOCK-211ENST00000513440 AXIN2Q9Y2T1 843 aa17.12■□□□□ 0.33
CLOCK-211ENST00000513440 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
CLOCK-211ENST00000513440 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
CLOCK-211ENST00000513440 BEND3Q5T5X7 828 aa17.11■□□□□ 0.33
CLOCK-211ENST00000513440 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
CLOCK-211ENST00000513440 SSH3Q8TE77 659 aa17.11■□□□□ 0.33
CLOCK-211ENST00000513440 SPG7Q9UQ90 795 aa17.11■□□□□ 0.33
CLOCK-211ENST00000513440 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
CLOCK-211ENST00000513440 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
CLOCK-211ENST00000513440 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
CLOCK-211ENST00000513440 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
CLOCK-211ENST00000513440 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
CLOCK-211ENST00000513440 MYL6BP14649 208 aa17.09■□□□□ 0.33
CLOCK-211ENST00000513440 CPA1P15085 419 aa17.09■□□□□ 0.33
CLOCK-211ENST00000513440 SIL1Q9H173 461 aa17.09■□□□□ 0.33
CLOCK-211ENST00000513440 GDPD2Q9HCC8 539 aa17.09■□□□□ 0.33
CLOCK-211ENST00000513440 CWC22Q9HCG8 908 aaKnown RBP17.09■□□□□ 0.33
CLOCK-211ENST00000513440 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
CLOCK-211ENST00000513440 KLHL40Q2TBA0 621 aa17.08■□□□□ 0.33
CLOCK-211ENST00000513440 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.33
CLOCK-211ENST00000513440 KIF1BPQ96EK5 621 aa17.08■□□□□ 0.32
CLOCK-211ENST00000513440 PTMSP20962 102 aa17.08■□□□□ 0.32
CLOCK-211ENST00000513440 NASPP49321 788 aaPredicted RBP17.07■□□□□ 0.32
CLOCK-211ENST00000513440 PROSER2Q86WR7 435 aaPredicted RBP17.07■□□□□ 0.32
CLOCK-211ENST00000513440 STAP2Q9UGK3 403 aa17.07■□□□□ 0.32
CLOCK-211ENST00000513440 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
CLOCK-211ENST00000513440 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
CLOCK-211ENST00000513440 CEMIPQ8WUJ3 1361 aa17.07■□□□□ 0.32
CLOCK-211ENST00000513440 CYP2E1P05181 493 aaPredicted RBP17.07■□□□□ 0.32
CLOCK-211ENST00000513440 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
CLOCK-211ENST00000513440 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
CLOCK-211ENST00000513440 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
CLOCK-211ENST00000513440 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
CLOCK-211ENST00000513440 ADCY9O60503 1353 aa17.06■□□□□ 0.32
CLOCK-211ENST00000513440 ZSCAN23Q3MJ62 389 aa17.06■□□□□ 0.32
CLOCK-211ENST00000513440 BABAM1Q9NWV8 329 aa17.06■□□□□ 0.32
CLOCK-211ENST00000513440 PXDNQ92626 1479 aa17.06■□□□□ 0.32
CLOCK-211ENST00000513440 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 POLA2Q14181 598 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 KLHDC4Q8TBB5 520 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 GPT2Q8TD30 523 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
CLOCK-211ENST00000513440 FAM208AQ9UK61 1670 aaKnown RBP17.05■□□□□ 0.32
CLOCK-211ENST00000513440 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
CLOCK-211ENST00000513440 NAP1L5Q96NT1 182 aaPredicted RBP17.05■□□□□ 0.32
CLOCK-211ENST00000513440 IFIT2P09913 472 aaKnown RBP17.04■□□□□ 0.32
CLOCK-211ENST00000513440 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
CLOCK-211ENST00000513440 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
CLOCK-211ENST00000513440 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
CLOCK-211ENST00000513440 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
CLOCK-211ENST00000513440 AACSQ86V21 672 aa17.04■□□□□ 0.32
CLOCK-211ENST00000513440 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
CLOCK-211ENST00000513440 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
CLOCK-211ENST00000513440 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
CLOCK-211ENST00000513440 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
CLOCK-211ENST00000513440 ANP32BQ92688 251 aaKnown RBP17.03■□□□□ 0.32
CLOCK-211ENST00000513440 SYCE3A1L190 88 aa17.03■□□□□ 0.32
CLOCK-211ENST00000513440 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
CLOCK-211ENST00000513440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
CLOCK-211ENST00000513440 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
CLOCK-211ENST00000513440 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
CLOCK-211ENST00000513440 SUCLG2Q96I99 432 aa17.02■□□□□ 0.32
CLOCK-211ENST00000513440 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.31
CLOCK-211ENST00000513440 LTN1O94822 1766 aa17.02■□□□□ 0.31
CLOCK-211ENST00000513440 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
CLOCK-211ENST00000513440 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
CLOCK-211ENST00000513440 CLEC17AQ6ZS10 378 aa17.01■□□□□ 0.31
CLOCK-211ENST00000513440 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
CLOCK-211ENST00000513440 SGSM2O43147 1006 aa17.01■□□□□ 0.31
CLOCK-211ENST00000513440 NFATC2IPQ8NCF5 419 aa17.01■□□□□ 0.31
CLOCK-211ENST00000513440 ESPNB1AK53 854 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 KCNJ4P48050 445 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 RBSNQ9H1K0 784 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 BICC1Q9H694 974 aaKnown RBP17■□□□□ 0.31
CLOCK-211ENST00000513440 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 HSPA4P34932 840 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
CLOCK-211ENST00000513440 TMEM63CQ9P1W3 806 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 CASTP20810 708 aaKnown RBP17■□□□□ 0.31
CLOCK-211ENST00000513440 NFAT5O94916 1531 aa17■□□□□ 0.31
CLOCK-211ENST00000513440 MCM2P49736 904 aa16.99■□□□□ 0.31
CLOCK-211ENST00000513440 RGPD2P0DJD1 1756 aa16.99■□□□□ 0.31
CLOCK-211ENST00000513440 HOXB7P09629 217 aa16.99■□□□□ 0.31
CLOCK-211ENST00000513440 PTH1RQ03431 593 aa16.99■□□□□ 0.31
CLOCK-211ENST00000513440 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
CLOCK-211ENST00000513440 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms