RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 PRDM10Q9NQV6 1147 aa15.58■□□□□ 0.08
RNF4-218ENST00000513284 SERPINB2P05120 415 aa15.56■□□□□ 0.08
RNF4-218ENST00000513284 MTHFSP49914 203 aa15.56■□□□□ 0.08
RNF4-218ENST00000513284 PLEKHO1Q53GL0 409 aaPredicted RBP15.56■□□□□ 0.08
RNF4-218ENST00000513284 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
RNF4-218ENST00000513284 ZNF530Q6P9A1 599 aaPredicted RBP15.56■□□□□ 0.08
RNF4-218ENST00000513284 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
RNF4-218ENST00000513284 TJP1Q07157 1748 aa15.56■□□□□ 0.08
RNF4-218ENST00000513284 AFDNP55196 1824 aaKnown RBP15.56■□□□□ 0.08
RNF4-218ENST00000513284 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
RNF4-218ENST00000513284 ZPR1O75312 459 aa15.55■□□□□ 0.08
RNF4-218ENST00000513284 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
RNF4-218ENST00000513284 NRXN2Q9P2S2 1712 aa15.54■□□□□ 0.08
RNF4-218ENST00000513284 CYP19A1P11511 503 aaPredicted RBP15.54■□□□□ 0.08
RNF4-218ENST00000513284 DPY19L2Q6NUT2 758 aa15.54■□□□□ 0.08
RNF4-218ENST00000513284 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
RNF4-218ENST00000513284 CNTNAP1P78357 1384 aa15.53■□□□□ 0.08
RNF4-218ENST00000513284 CARMIL3Q8ND23 1372 aa15.53■□□□□ 0.08
RNF4-218ENST00000513284 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
RNF4-218ENST00000513284 VEGFBP49765 207 aa15.53■□□□□ 0.08
RNF4-218ENST00000513284 AEBP1Q8IUX7 1158 aa15.53■□□□□ 0.08
RNF4-218ENST00000513284 TIAM2Q8IVF5 1701 aa15.53■□□□□ 0.08
RNF4-218ENST00000513284 PASKQ96RG2 1323 aa15.52■□□□□ 0.08
RNF4-218ENST00000513284 TNNT2P45379 298 aaPredicted RBP15.52■□□□□ 0.08
RNF4-218ENST00000513284 AMOTQ4VCS5 1084 aa15.52■□□□□ 0.08
RNF4-218ENST00000513284 WBP1LQ9NX94 342 aa15.52■□□□□ 0.08
RNF4-218ENST00000513284 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.07
RNF4-218ENST00000513284 H0YIN7 160 aa15.51■□□□□ 0.07
RNF4-218ENST00000513284 C21orf2O43822 256 aa15.51■□□□□ 0.07
RNF4-218ENST00000513284 ITGBL1O95965 494 aaPredicted RBP15.51■□□□□ 0.07
RNF4-218ENST00000513284 CTCFP49711 727 aaPredicted RBP15.51■□□□□ 0.07
RNF4-218ENST00000513284 LBX1P52954 281 aa15.51■□□□□ 0.07
RNF4-218ENST00000513284 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
RNF4-218ENST00000513284 FAM161AQ3B820 660 aa15.5■□□□□ 0.07
RNF4-218ENST00000513284 CDCA8Q53HL2 280 aa15.5■□□□□ 0.07
RNF4-218ENST00000513284 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
RNF4-218ENST00000513284 LGR6Q9HBX8 967 aa15.49■□□□□ 0.07
RNF4-218ENST00000513284 ZBTB1Q9Y2K1 713 aa15.49■□□□□ 0.07
RNF4-218ENST00000513284 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
RNF4-218ENST00000513284 CCDC24Q8N4L8 307 aa15.48■□□□□ 0.07
RNF4-218ENST00000513284 ABHD8Q96I13 439 aa15.48■□□□□ 0.07
RNF4-218ENST00000513284 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
RNF4-218ENST00000513284 FER1L6Q2WGJ9 1857 aa15.47■□□□□ 0.07
RNF4-218ENST00000513284 C1orf141Q5JVX7 400 aa15.47■□□□□ 0.07
RNF4-218ENST00000513284 ZNF622Q969S3 477 aaKnown RBP eCLIP15.47■□□□□ 0.07
RNF4-218ENST00000513284 VIRMAQ69YN4 1812 aaKnown RBP15.46■□□□□ 0.07
RNF4-218ENST00000513284 HSPA8P11142 646 aaKnown RBP15.46■□□□□ 0.07
RNF4-218ENST00000513284 BICDL1Q6ZP65 573 aa15.46■□□□□ 0.07
RNF4-218ENST00000513284 TAF1DQ9H5J8 278 aaPredicted RBP15.46■□□□□ 0.07
RNF4-218ENST00000513284 SLC52A2Q9HAB3 445 aa15.46■□□□□ 0.07
RNF4-218ENST00000513284 COL15A1P39059 1388 aa15.46■□□□□ 0.07
RNF4-218ENST00000513284 LTBP3Q9NS15 1303 aa15.45■□□□□ 0.06
RNF4-218ENST00000513284 TMEM88BA6NKF7 163 aa15.45■□□□□ 0.06
RNF4-218ENST00000513284 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
RNF4-218ENST00000513284 LDHDQ86WU2 507 aa15.45■□□□□ 0.06
RNF4-218ENST00000513284 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
RNF4-218ENST00000513284 ANKRD31Q8N7Z5 1873 aa15.45■□□□□ 0.06
RNF4-218ENST00000513284 RGS19P49795 217 aa15.44■□□□□ 0.06
RNF4-218ENST00000513284 EIF5P55010 431 aaKnown RBP15.44■□□□□ 0.06
RNF4-218ENST00000513284 SULT6B1Q6IMI4 303 aa15.44■□□□□ 0.06
RNF4-218ENST00000513284 AIDAQ96BJ3 306 aa15.44■□□□□ 0.06
RNF4-218ENST00000513284 SCN11AQ9UI33 1791 aa15.44■□□□□ 0.06
RNF4-218ENST00000513284 PRR5LQ6MZQ0 368 aa15.43■□□□□ 0.06
RNF4-218ENST00000513284 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
RNF4-218ENST00000513284 TAOK3Q9H2K8 898 aa15.43■□□□□ 0.06
RNF4-218ENST00000513284 RASSF10A6NK89 507 aa15.42■□□□□ 0.06
RNF4-218ENST00000513284 RNMTO43148 476 aaKnown RBP15.42■□□□□ 0.06
RNF4-218ENST00000513284 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
RNF4-218ENST00000513284 C7orf43Q8WVR3 580 aa15.42■□□□□ 0.06
RNF4-218ENST00000513284 PCDH10Q9P2E7 1040 aa15.42■□□□□ 0.06
RNF4-218ENST00000513284 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
RNF4-218ENST00000513284 PDE6BP35913 854 aa15.41■□□□□ 0.06
RNF4-218ENST00000513284 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
RNF4-218ENST00000513284 AKAP4Q5JQC9 854 aa15.41■□□□□ 0.06
RNF4-218ENST00000513284 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
RNF4-218ENST00000513284 IL13P35225 146 aa15.4■□□□□ 0.06
RNF4-218ENST00000513284 VSIG10Q8N0Z9 540 aa15.4■□□□□ 0.06
RNF4-218ENST00000513284 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
RNF4-218ENST00000513284 IQCA1LA6NCM1 817 aa15.39■□□□□ 0.05
RNF4-218ENST00000513284 SRGNP10124 158 aa15.39■□□□□ 0.05
RNF4-218ENST00000513284 MLLT1Q03111 559 aaPredicted RBP15.39■□□□□ 0.05
RNF4-218ENST00000513284 PRPF40BQ6NWY9 871 aaKnown RBP15.39■□□□□ 0.05
RNF4-218ENST00000513284 TBC1D2BQ9UPU7 963 aa15.39■□□□□ 0.05
RNF4-218ENST00000513284 WDR33Q9C0J8 1336 aaKnown RBP15.39■□□□□ 0.05
RNF4-218ENST00000513284 EAPPQ56P03 285 aaPredicted RBP15.38■□□□□ 0.05
RNF4-218ENST00000513284 STYK1Q6J9G0 422 aa15.38■□□□□ 0.05
RNF4-218ENST00000513284 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
RNF4-218ENST00000513284 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
RNF4-218ENST00000513284 SCN4AP35499 1836 aa15.38■□□□□ 0.05
RNF4-218ENST00000513284 TNRC18O15417 2968 aaPredicted RBP15.37■□□□□ 0.05
RNF4-218ENST00000513284 ADAMTSL1Q8N6G6 1762 aa15.37■□□□□ 0.05
RNF4-218ENST00000513284 CCDC85CA6NKD9 419 aa15.37■□□□□ 0.05
RNF4-218ENST00000513284 FMR1Q06787 632 aaKnown RBP eCLIP15.37■□□□□ 0.05
RNF4-218ENST00000513284 MAP1SQ66K74 1059 aaPredicted RBP15.37■□□□□ 0.05
RNF4-218ENST00000513284 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
RNF4-218ENST00000513284 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
RNF4-218ENST00000513284 MRC1P22897 1456 aa15.36■□□□□ 0.05
RNF4-218ENST00000513284 EPHX2P34913 555 aa15.36■□□□□ 0.05
RNF4-218ENST00000513284 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
RNF4-218ENST00000513284 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms