RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 AKAP2Q9Y2D5 859 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 CACNA2D4Q7Z3S7 1137 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 SLC5A4Q9NY91 659 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 IKBKGQ9Y6K9 419 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 STK3Q13188 491 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 USP37Q86T82 979 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 IMPG2Q9BZV3 1241 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 VAT1LQ9HCJ6 419 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
VCAN-208ENST00000512590 PSMC4P43686 418 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 FKBP15Q5T1M5 1219 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 SOGA1O94964 1423 aa10.34□□□□□ -0.75
VCAN-208ENST00000512590 PHLDB1Q86UU1 1377 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 TDRD9Q8NDG6 1382 aaKnown RBP10.33□□□□□ -0.76
VCAN-208ENST00000512590 KIF5CO60282 957 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 FGFR1OPO95684 399 aaKnown RBP10.33□□□□□ -0.76
VCAN-208ENST00000512590 FAM193AP78312 1265 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 CCT6BQ92526 530 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 CDC5LQ99459 802 aaKnown RBP10.33□□□□□ -0.76
VCAN-208ENST00000512590 FAM47CQ5HY64 1035 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
VCAN-208ENST00000512590 LRRCC1Q9C099 1032 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 PANK3Q9H999 370 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 PPP1R42Q7Z4L9 355 aa10.33□□□□□ -0.76
VCAN-208ENST00000512590 CSPG5O95196 566 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 SATB1Q01826 763 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 UTP14CQ5TAP6 766 aaKnown RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 CRCPO75575 148 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 SEPT6Q14141 434 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 ABT1Q9ULW3 272 aaKnown RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 CCDC7Q96M83 1385 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 RRBP1Q9P2E9 1410 aaKnown RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 MAP3K12Q12852 859 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 GGNBP2Q9H3C7 697 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 TMCO5BA8MYB1 307 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 GCOM1H8Y6P7 765 aaPredicted RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 ATP2C2O75185 946 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 MYZAPP0CAP1 466 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 SLC8A3P57103 927 aa10.32□□□□□ -0.76
VCAN-208ENST00000512590 IMMTQ16891 758 aaKnown RBP10.32□□□□□ -0.76
VCAN-208ENST00000512590 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 IQCA1Q86XH1 822 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 CFAP45Q9UL16 551 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 FSD2A1L4K1 749 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 TBCAO75347 108 aaKnown RBP10.31□□□□□ -0.76
VCAN-208ENST00000512590 ACRBPQ8NEB7 543 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 SMC1BQ8NDV3 1235 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 TRIM6Q9C030 488 aaPredicted RBP10.31□□□□□ -0.76
VCAN-208ENST00000512590 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 TPD52P55327 224 aaPredicted RBP10.31□□□□□ -0.76
VCAN-208ENST00000512590 SETDB2Q96T68 719 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.31□□□□□ -0.76
VCAN-208ENST00000512590 KIF5AQ12840 1032 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 PRKG1Q13976 671 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 SLC4A8Q2Y0W8 1093 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 PPP4R4Q6NUP7 873 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 ATRIPQ8WXE1 791 aa10.31□□□□□ -0.76
VCAN-208ENST00000512590 CCDC194A0A1B0GVG4 234 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 PDCP20941 246 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 SPA17Q15506 151 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 EYA3Q99504 573 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 ME1P48163 572 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 SMCR8Q8TEV9 937 aaPredicted RBP10.3□□□□□ -0.76
VCAN-208ENST00000512590 FAM193BQ96PV7 902 aaPredicted RBP10.3□□□□□ -0.76
VCAN-208ENST00000512590 NCAPGQ9BPX3 1015 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 NAPBQ9H115 298 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 PICALMQ13492 652 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.3□□□□□ -0.76
VCAN-208ENST00000512590 OPA1O60313 960 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 MAP7D1Q3KQU3 841 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 KCNH5Q8NCM2 988 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 HOOK2Q96ED9 719 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 TAOK3Q9H2K8 898 aa10.3□□□□□ -0.76
VCAN-208ENST00000512590 CBFA2T2O43439 604 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 ARHGAP27Q6ZUM4 889 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 MSANTD4Q8NCY6 345 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 FNDC3AQ9Y2H6 1198 aaKnown RBP10.29□□□□□ -0.76
VCAN-208ENST00000512590 EIF4E1BA6NMX2 242 aaKnown RBP10.29□□□□□ -0.76
VCAN-208ENST00000512590 GMNNO75496 209 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 MYCP01106 439 aaPredicted RBP10.29□□□□□ -0.76
VCAN-208ENST00000512590 CCDC18Q5T9S5 1454 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 IFIT5Q13325 482 aaKnown RBP10.29□□□□□ -0.76
VCAN-208ENST00000512590 ACSBG1Q96GR2 724 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 SEPT10Q9P0V9 454 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 GOLGA6L9A6NEM1 432 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 ANKRD1Q15327 319 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 LEKR1Q6ZMV7 388 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 SLC17A8Q8NDX2 589 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 CALML4Q96GE6 196 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 NACADO15069 1562 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 SMTNL1A8MU46 457 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 MCM10Q7L590 875 aa10.29□□□□□ -0.76
VCAN-208ENST00000512590 AACSQ86V21 672 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms