RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 PTPRCP08575 1304 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 MS4A1P11836 297 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 FAM182BQ5T319 152 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 EXOC6Q8TAG9 804 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 PANK1Q8TE04 598 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 NECTIN2Q92692 538 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
PDGFRA-209ENST00000512143 ABCC4O15439 1325 aa12.74□□□□□ -0.37
PDGFRA-209ENST00000512143 ERBB4Q15303 1308 aa12.74□□□□□ -0.37
PDGFRA-209ENST00000512143 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
PDGFRA-209ENST00000512143 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
PDGFRA-209ENST00000512143 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
PDGFRA-209ENST00000512143 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
PDGFRA-209ENST00000512143 CICQ96RK0 1608 aaPredicted RBP12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 FLIIQ13045 1269 aa12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 EP400Q96L91 3159 aa12.73□□□□□ -0.37
PDGFRA-209ENST00000512143 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 BTAF1O14981 1849 aa12.72□□□□□ -0.37
PDGFRA-209ENST00000512143 TJP1Q07157 1748 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 PALLDQ8WX93 1383 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 ANXA1P04083 346 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 SIK1P57059 783 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
PDGFRA-209ENST00000512143 A1BGP04217 495 aa12.7□□□□□ -0.38
PDGFRA-209ENST00000512143 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
PDGFRA-209ENST00000512143 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
PDGFRA-209ENST00000512143 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
PDGFRA-209ENST00000512143 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
PDGFRA-209ENST00000512143 STARD3NLO95772 234 aa12.69□□□□□ -0.38
PDGFRA-209ENST00000512143 ITPK1Q13572 414 aa12.69□□□□□ -0.38
PDGFRA-209ENST00000512143 ADCY9O60503 1353 aa12.69□□□□□ -0.38
PDGFRA-209ENST00000512143 RREB1Q92766 1687 aa12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 AAMPQ13685 434 aa12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 LY75O60449 1722 aa12.68□□□□□ -0.38
PDGFRA-209ENST00000512143 PXDNLA1KZ92 1463 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 N4BP2Q86UW6 1770 aaPredicted RBP12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 PI4KAP2A4QPH2 592 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 F6X3S4 739 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 MYL6BP14649 208 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 PI4KAP1Q8N8J0 262 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
PDGFRA-209ENST00000512143 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
PDGFRA-209ENST00000512143 CCT4P50991 539 aaKnown RBP12.66□□□□□ -0.38
PDGFRA-209ENST00000512143 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
PDGFRA-209ENST00000512143 ZBTB40Q9NUA8 1239 aa12.66□□□□□ -0.38
PDGFRA-209ENST00000512143 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
PDGFRA-209ENST00000512143 TRIM37O94972 964 aa12.65□□□□□ -0.38
PDGFRA-209ENST00000512143 BEND3Q5T5X7 828 aa12.65□□□□□ -0.38
PDGFRA-209ENST00000512143 ITPRIPQ8IWB1 547 aa12.65□□□□□ -0.38
PDGFRA-209ENST00000512143 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
PDGFRA-209ENST00000512143 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
PDGFRA-209ENST00000512143 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 IL6STP40189 918 aaPredicted RBP12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 LINC00116Q8NCU8 138 aa12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
PDGFRA-209ENST00000512143 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
PDGFRA-209ENST00000512143 AIMP1Q12904 312 aaKnown RBP12.63□□□□□ -0.39
PDGFRA-209ENST00000512143 RC3H1Q5TC82 1133 aaKnown RBP12.63□□□□□ -0.39
PDGFRA-209ENST00000512143 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
PDGFRA-209ENST00000512143 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
PDGFRA-209ENST00000512143 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
PDGFRA-209ENST00000512143 PLSCR1O15162 318 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms