RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 TEX13AQ9BXU3 409 aaPredicted RBP10.63□□□□□ -0.71
NEK1-207ENST00000511633 TTC21AQ8NDW8 1320 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 ZNF287Q9HBT7 754 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 SNRKQ9NRH2 765 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 GOLIM4O00461 696 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 LDHAL6AQ6ZMR3 332 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 PPP1R42Q7Z4L9 355 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 NUP62CLQ9H1M0 184 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 KIAA0556O60303 1618 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 PPFIBP1Q86W92 1011 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 LARP6Q9BRS8 491 aaKnown RBP10.63□□□□□ -0.71
NEK1-207ENST00000511633 ZNHIT6Q9NWK9 470 aaKnown RBP10.63□□□□□ -0.71
NEK1-207ENST00000511633 CHPF2Q9P2E5 772 aa10.63□□□□□ -0.71
NEK1-207ENST00000511633 SEC63Q9UGP8 760 aaKnown RBP10.63□□□□□ -0.71
NEK1-207ENST00000511633 ZNF213O14771 459 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 TEX35Q5T0J7 233 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 CEP57L1Q8IYX8 460 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 RALGAPBQ86X10 1494 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 CAMK4Q16566 473 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
NEK1-207ENST00000511633 GUCY1B3Q02153 619 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 ZCRB1Q8TBF4 217 aaKnown RBP10.62□□□□□ -0.71
NEK1-207ENST00000511633 PDCL3Q9H2J4 239 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
NEK1-207ENST00000511633 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
NEK1-207ENST00000511633 MCM4P33991 863 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 ECHDC1Q9NTX5 307 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 ADAMTS12P58397 1594 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 LRRC59Q96AG4 307 aaKnown RBP10.61□□□□□ -0.71
NEK1-207ENST00000511633 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 IL16Q14005 1332 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 ZNF444Q8N0Y2 327 aaPredicted RBP10.61□□□□□ -0.71
NEK1-207ENST00000511633 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 NPHP3Q7Z494 1330 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 RFC4P35249 363 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 EIF4A2Q14240 407 aaKnown RBP10.61□□□□□ -0.71
NEK1-207ENST00000511633 ACBD3Q9H3P7 528 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 SLC12A7Q9Y666 1083 aa10.61□□□□□ -0.71
NEK1-207ENST00000511633 CCP110O43303 1012 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 IGHDP01880 384 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 HSP90B2PQ58FF3 399 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 DDX46Q7L014 1031 aaKnown RBP10.6□□□□□ -0.71
NEK1-207ENST00000511633 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 CEP131Q9UPN4 1083 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 MAPKBP1O60336 1514 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
NEK1-207ENST00000511633 SKIDA1Q1XH10 827 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 CCDC96Q2M329 555 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
NEK1-207ENST00000511633 CDC5LQ99459 802 aaKnown RBP10.6□□□□□ -0.71
NEK1-207ENST00000511633 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 CCT2P78371 535 aaKnown RBP10.6□□□□□ -0.71
NEK1-207ENST00000511633 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
NEK1-207ENST00000511633 IFIT3O14879 490 aaKnown RBP10.59□□□□□ -0.71
NEK1-207ENST00000511633 MATR3P43243 847 aaKnown RBP eCLIP10.59□□□□□ -0.711e-6■■■■■ 28.3
NEK1-207ENST00000511633 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 C8orf76Q96K31 380 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 GOLGA8BA8MQT2 603 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 HMGB1P09429 215 aaKnown RBP10.59□□□□□ -0.71
NEK1-207ENST00000511633 CDR1P51861 262 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 TBC1D9Q6ZT07 1266 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
NEK1-207ENST00000511633 ATP6V1AP38606 617 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 SYCE3A1L190 88 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 CBFA2T2O43439 604 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 HSPA2P54652 639 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 HAND2P61296 217 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 DHX8Q14562 1220 aaKnown RBP10.59□□□□□ -0.71
NEK1-207ENST00000511633 C8orf37Q96NL8 207 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 MEIS3Q99687 375 aa10.59□□□□□ -0.71
NEK1-207ENST00000511633 CCDC196A0A1B0GTZ2 297 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 NBPF6Q5VWK0 638 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 COPS6Q7L5N1 327 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.726e-7■□□□□ 8.9
NEK1-207ENST00000511633 NBPF4Q96M43 638 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 SH2B1Q9NRF2 756 aaPredicted RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 WDR62O43379 1518 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 CCDC144CPQ8IYA2 1237 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 NUP160Q12769 1436 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 TTF1Q15361 905 aaPredicted RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 MAP3K11Q16584 847 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 MTHFSDQ2M296 383 aaKnown RBP10.58□□□□□ -0.72
NEK1-207ENST00000511633 ABCC10Q5T3U5 1492 aa10.58□□□□□ -0.72
NEK1-207ENST00000511633 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms