RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
HMGB2-205ENST00000511316 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
HMGB2-205ENST00000511316 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
HMGB2-205ENST00000511316 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 SIK1P57059 783 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
HMGB2-205ENST00000511316 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 MRC1P22897 1456 aa16.11■□□□□ 0.17
HMGB2-205ENST00000511316 ITPK1Q13572 414 aa16.11■□□□□ 0.17
HMGB2-205ENST00000511316 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
HMGB2-205ENST00000511316 CHMP4BQ9H444 224 aaKnown RBP16.11■□□□□ 0.17
HMGB2-205ENST00000511316 IL16Q14005 1332 aa16.11■□□□□ 0.17
HMGB2-205ENST00000511316 MAP3K5Q99683 1374 aa16.1■□□□□ 0.17
HMGB2-205ENST00000511316 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
HMGB2-205ENST00000511316 PTMSP20962 102 aa16.09■□□□□ 0.17
HMGB2-205ENST00000511316 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
HMGB2-205ENST00000511316 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
HMGB2-205ENST00000511316 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.17
HMGB2-205ENST00000511316 DCTN1Q14203 1278 aa16.08■□□□□ 0.17
HMGB2-205ENST00000511316 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.17
HMGB2-205ENST00000511316 PANK1Q8TE04 598 aa16.08■□□□□ 0.17
HMGB2-205ENST00000511316 UTRNP46939 3433 aa16.08■□□□□ 0.16
HMGB2-205ENST00000511316 MCM10Q7L590 875 aa16.08■□□□□ 0.16
HMGB2-205ENST00000511316 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
HMGB2-205ENST00000511316 BRPF3Q9ULD4 1205 aa16.08■□□□□ 0.16
HMGB2-205ENST00000511316 DDX19BQ9UMR2 479 aa16.08■□□□□ 0.16
HMGB2-205ENST00000511316 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
HMGB2-205ENST00000511316 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
HMGB2-205ENST00000511316 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
HMGB2-205ENST00000511316 FTSJ3Q8IY81 847 aaKnown RBP16.06■□□□□ 0.16
HMGB2-205ENST00000511316 ANTXR1Q9H6X2 564 aa16.06■□□□□ 0.16
HMGB2-205ENST00000511316 PNPLA7Q6ZV29 1317 aa16.06■□□□□ 0.16
HMGB2-205ENST00000511316 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
HMGB2-205ENST00000511316 ATP6V1AP38606 617 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
HMGB2-205ENST00000511316 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 GOLGB1Q14789 3259 aaKnown RBP16.05■□□□□ 0.16
HMGB2-205ENST00000511316 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 KCNQ3O43525 872 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 CHMP5Q9NZZ3 219 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 PDZRN3Q9UPQ7 1066 aa16.05■□□□□ 0.16
HMGB2-205ENST00000511316 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
HMGB2-205ENST00000511316 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
HMGB2-205ENST00000511316 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
HMGB2-205ENST00000511316 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
HMGB2-205ENST00000511316 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
HMGB2-205ENST00000511316 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
HMGB2-205ENST00000511316 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
HMGB2-205ENST00000511316 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
HMGB2-205ENST00000511316 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
HMGB2-205ENST00000511316 KCPQ6ZWJ8 1503 aa16.03■□□□□ 0.16
HMGB2-205ENST00000511316 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
HMGB2-205ENST00000511316 PTGER2P43116 358 aa16.03■□□□□ 0.16
HMGB2-205ENST00000511316 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
HMGB2-205ENST00000511316 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
HMGB2-205ENST00000511316 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
HMGB2-205ENST00000511316 C5P01031 1676 aa16.02■□□□□ 0.16
HMGB2-205ENST00000511316 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
HMGB2-205ENST00000511316 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 PCDHB15Q9Y5E8 787 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 DLG5Q8TDM6 1919 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 TUBGCP6Q96RT7 1819 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 C4BP0C0L5 1744 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
HMGB2-205ENST00000511316 ZBTB7AO95365 584 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 RIPK4P57078 832 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 TEFQ10587 303 aa16.01■□□□□ 0.15
HMGB2-205ENST00000511316 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
HMGB2-205ENST00000511316 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
HMGB2-205ENST00000511316 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
HMGB2-205ENST00000511316 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
HMGB2-205ENST00000511316 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
HMGB2-205ENST00000511316 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
HMGB2-205ENST00000511316 TAF7Q15545 349 aaPredicted RBP15.99■□□□□ 0.15
HMGB2-205ENST00000511316 DNAJC10Q8IXB1 793 aa15.99■□□□□ 0.15
HMGB2-205ENST00000511316 VSIG10Q8N0Z9 540 aa15.99■□□□□ 0.15
HMGB2-205ENST00000511316 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
HMGB2-205ENST00000511316 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
HMGB2-205ENST00000511316 QSER1Q2KHR3 1735 aa15.99■□□□□ 0.15
HMGB2-205ENST00000511316 GOLGA6L3A6NEY3 463 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 CYP19A1P11511 503 aaPredicted RBP15.98■□□□□ 0.15
HMGB2-205ENST00000511316 ALDH1L2Q3SY69 923 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 HSCBQ8IWL3 235 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 C22orf23Q9BZE7 217 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
HMGB2-205ENST00000511316 UBR2Q8IWV8 1755 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
HMGB2-205ENST00000511316 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
HMGB2-205ENST00000511316 CALD1Q05682 793 aaKnown RBP15.98■□□□□ 0.15
HMGB2-205ENST00000511316 SMC5Q8IY18 1101 aa15.98■□□□□ 0.15
HMGB2-205ENST00000511316 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
HMGB2-205ENST00000511316 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 TJP1Q07157 1748 aa15.97■□□□□ 0.15
HMGB2-205ENST00000511316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms