RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-208	ENST00000511248	SLC52A2	Q9HAB3	445 aa		13.72	□□□□□ -0.21
PRKAA1-208	ENST00000511248	MRC1	P22897	1456 aa		13.72	□□□□□ -0.21
PRKAA1-208	ENST00000511248	SCN11A	Q9UI33	1791 aa		13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	SOS1	Q07889	1333 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	KIF7	Q2M1P5	1343 aa		13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	POLRMT	O00411	1230 aa	Known RBP	13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	HMOX1	P09601	288 aa		13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	CHRNA5	P30532	468 aa		13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	DALRD3	Q5D0E6	543 aa	Known RBP	13.71	□□□□□ -0.21
PRKAA1-208	ENST00000511248	KCP	Q6ZWJ8	1503 aa		13.7	□□□□□ -0.22
PRKAA1-208	ENST00000511248	CYP19A1	P11511	503 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKAA1-208	ENST00000511248	TM4SF1	P30408	202 aa		13.7	□□□□□ -0.22
PRKAA1-208	ENST00000511248	SLC39A6	Q13433	755 aa		13.7	□□□□□ -0.22
PRKAA1-208	ENST00000511248	JMY	Q8N9B5	988 aa		13.7	□□□□□ -0.22
PRKAA1-208	ENST00000511248	KLRG1	Q96E93	195 aa		13.7	□□□□□ -0.22
PRKAA1-208	ENST00000511248	RNMT	O43148	476 aa	Known RBP	13.69	□□□□□ -0.22
PRKAA1-208	ENST00000511248	ZPR1	O75312	459 aa		13.69	□□□□□ -0.22
PRKAA1-208	ENST00000511248	USPL1	Q5W0Q7	1092 aa		13.69	□□□□□ -0.22
PRKAA1-208	ENST00000511248	MTHFSD	Q2M296	383 aa	Known RBP	13.68	□□□□□ -0.22
PRKAA1-208	ENST00000511248	ARFGEF1	Q9Y6D6	1849 aa		13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	PER1	O15534	1290 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	NFIX	Q14938	502 aa		13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	RRAGC	Q9HB90	399 aa		13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	RNF181	Q9P0P0	153 aa		13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	ZBTB1	Q9Y2K1	713 aa		13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	COL15A1	P39059	1388 aa		13.67	□□□□□ -0.22
PRKAA1-208	ENST00000511248	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.66	□□□□□ -0.22
PRKAA1-208	ENST00000511248	DIAPH1	O60610	1272 aa	Known RBP	13.66	□□□□□ -0.22
PRKAA1-208	ENST00000511248	CC2D1B	Q5T0F9	858 aa	Known RBP	13.66	□□□□□ -0.22
PRKAA1-208	ENST00000511248	BCL2L12	Q9HB09	334 aa		13.66	□□□□□ -0.22
PRKAA1-208	ENST00000511248	NARF	Q9UHQ1	456 aa		13.66	□□□□□ -0.22
PRKAA1-208	ENST00000511248	VSIG10	Q8N0Z9	540 aa		13.65	□□□□□ -0.22
PRKAA1-208	ENST00000511248	SMC1B	Q8NDV3	1235 aa		13.65	□□□□□ -0.22
PRKAA1-208	ENST00000511248	COL3A1	P02461	1466 aa	Predicted RBP	13.64	□□□□□ -0.23
PRKAA1-208	ENST00000511248	CANX	P27824	592 aa	Known RBP	13.63	□□□□□ -0.23
PRKAA1-208	ENST00000511248	UBR2	Q8IWV8	1755 aa		13.63	□□□□□ -0.23
PRKAA1-208	ENST00000511248	WDR90	Q96KV7	1748 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	NRXN2	Q9P2S2	1712 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	CARMIL3	Q8ND23	1372 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	GLTPD2	A6NH11	291 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	VEGFA	P15692	232 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	LMNB1	P20700	586 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	HTRA3	P83110	453 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	RASSF7	Q02833	373 aa		13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKAA1-208	ENST00000511248	STARD3NL	O95772	234 aa		13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	SERPINB2	P05120	415 aa		13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	PRELP	P51888	382 aa		13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	EIF5	P55010	431 aa	Known RBP	13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	IL17RE	Q8NFR9	667 aa		13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	ZNF496	Q96IT1	587 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	VIRMA	Q69YN4	1812 aa	Known RBP	13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	PCNT	O95613	3336 aa		13.61	□□□□□ -0.23
PRKAA1-208	ENST00000511248	AFDN	P55196	1824 aa	Known RBP	13.6	□□□□□ -0.23
PRKAA1-208	ENST00000511248	CNGB1	Q14028	1251 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKAA1-208	ENST00000511248	C2CD5	Q86YS7	1000 aa		13.6	□□□□□ -0.23
PRKAA1-208	ENST00000511248	TTC5	Q8N0Z6	440 aa		13.6	□□□□□ -0.23
PRKAA1-208	ENST00000511248	TTLL6	Q8N841	843 aa		13.6	□□□□□ -0.23
PRKAA1-208	ENST00000511248	NPC1L1	Q9UHC9	1359 aa		13.59	□□□□□ -0.23
PRKAA1-208	ENST00000511248	U2SURP	O15042	1029 aa	Known RBP	13.59	□□□□□ -0.23
PRKAA1-208	ENST00000511248	ZNF790	Q6PG37	636 aa		13.59	□□□□□ -0.23
PRKAA1-208	ENST00000511248	BICDL1	Q6ZP65	573 aa		13.59	□□□□□ -0.23
PRKAA1-208	ENST00000511248	PDZRN3	Q9UPQ7	1066 aa		13.59	□□□□□ -0.23
PRKAA1-208	ENST00000511248	SBF1	O95248	1867 aa		13.59	□□□□□ -0.23
PRKAA1-208	ENST00000511248	HEG1	Q9ULI3	1381 aa		13.58	□□□□□ -0.23
PRKAA1-208	ENST00000511248	DLEC1	Q9Y238	1755 aa		13.58	□□□□□ -0.23
PRKAA1-208	ENST00000511248	GNAT3	A8MTJ3	354 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248		H0YIN7	160 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	TEF	Q10587	303 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	DDX10	Q13206	875 aa	Known RBP	13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	TBC1D9B	Q66K14	1250 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	DPY19L2	Q6NUT2	758 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	TNS4	Q8IZW8	715 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	MIER1	Q8N108	512 aa		13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.58	□□□□□ -0.24
PRKAA1-208	ENST00000511248		A0A087WZG4	1122 aa		13.57	□□□□□ -0.24
PRKAA1-208	ENST00000511248	NFKBIE	O00221	500 aa		13.57	□□□□□ -0.24
PRKAA1-208	ENST00000511248	GAS2L2	Q8NHY3	880 aa		13.57	□□□□□ -0.24
PRKAA1-208	ENST00000511248	PHACTR3	Q96KR7	559 aa		13.57	□□□□□ -0.24
PRKAA1-208	ENST00000511248	CEMIP	Q8WUJ3	1361 aa		13.57	□□□□□ -0.24
PRKAA1-208	ENST00000511248	SCN7A	Q01118	1682 aa		13.56	□□□□□ -0.24
PRKAA1-208	ENST00000511248	CCDC24	Q8N4L8	307 aa		13.56	□□□□□ -0.24
PRKAA1-208	ENST00000511248	TBC1D2B	Q9UPU7	963 aa		13.56	□□□□□ -0.24
PRKAA1-208	ENST00000511248	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKAA1-208	ENST00000511248	SIPA1L3	O60292	1781 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	KCNQ3	O43525	872 aa		13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	A1BG	P04217	495 aa		13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	SLC4A2	P04920	1241 aa		13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	PRR5L	Q6MZQ0	368 aa		13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	FMNL2	Q96PY5	1086 aa		13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	BRIP1	Q9BX63	1249 aa		13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKAA1-208	ENST00000511248	CAMTA2	O94983	1202 aa		13.54	□□□□□ -0.24
PRKAA1-208	ENST00000511248	PRKAR2B	P31323	418 aa		13.54	□□□□□ -0.24
PRKAA1-208	ENST00000511248	IL6ST	P40189	918 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKAA1-208	ENST00000511248	RSPH6A	Q9H0K4	717 aa		13.54	□□□□□ -0.24
PRKAA1-208	ENST00000511248	COL11A2	P13942	1736 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKAA1-208	ENST00000511248	ANKRD31	Q8N7Z5	1873 aa		13.53	□□□□□ -0.24
PRKAA1-208	ENST00000511248	ANP32C	O43423	234 aa		13.53	□□□□□ -0.24
PRKAA1-208	ENST00000511248	HSPA1A	P0DMV8	641 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms