RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 USB1Q9BQ65 265 aaKnown RBP12.94□□□□□ -0.34
RETREG1-206ENST00000510362 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
RETREG1-206ENST00000510362 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
RETREG1-206ENST00000510362 TSC1Q92574 1164 aa12.93□□□□□ -0.34
RETREG1-206ENST00000510362 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
RETREG1-206ENST00000510362 TLL1O43897 1013 aa12.92□□□□□ -0.34
RETREG1-206ENST00000510362 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
RETREG1-206ENST00000510362 ZNF516Q92618 1163 aa12.92□□□□□ -0.34
RETREG1-206ENST00000510362 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
RETREG1-206ENST00000510362 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
RETREG1-206ENST00000510362 IL21Q9HBE4 155 aa12.92□□□□□ -0.34
RETREG1-206ENST00000510362 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
RETREG1-206ENST00000510362 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
RETREG1-206ENST00000510362 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
RETREG1-206ENST00000510362 SPSB2Q99619 263 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 TULP4Q9NRJ4 1543 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
RETREG1-206ENST00000510362 CTDSPL2Q05D32 466 aa12.9□□□□□ -0.34
RETREG1-206ENST00000510362 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
RETREG1-206ENST00000510362 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
RETREG1-206ENST00000510362 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
RETREG1-206ENST00000510362 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
RETREG1-206ENST00000510362 PXDNQ92626 1479 aa12.89□□□□□ -0.35
RETREG1-206ENST00000510362 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
RETREG1-206ENST00000510362 FAM160A2Q8N612 972 aaPredicted RBP12.88□□□□□ -0.35
RETREG1-206ENST00000510362 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
RETREG1-206ENST00000510362 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
RETREG1-206ENST00000510362 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
RETREG1-206ENST00000510362 ADH1BP00325 375 aa12.87□□□□□ -0.35
RETREG1-206ENST00000510362 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
RETREG1-206ENST00000510362 DESI1Q6ICB0 168 aa12.87□□□□□ -0.35
RETREG1-206ENST00000510362 LRP6O75581 1613 aa12.87□□□□□ -0.35
RETREG1-206ENST00000510362 WASLO00401 505 aaPredicted RBP12.86□□□□□ -0.35
RETREG1-206ENST00000510362 MTMR14Q8NCE2 650 aa12.86□□□□□ -0.35
RETREG1-206ENST00000510362 HIRIP3Q9BW71 556 aaPredicted RBP12.86□□□□□ -0.35
RETREG1-206ENST00000510362 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
RETREG1-206ENST00000510362 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
RETREG1-206ENST00000510362 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
RETREG1-206ENST00000510362 FOXO3O43524 673 aa12.85□□□□□ -0.35
RETREG1-206ENST00000510362 PRDM9Q9NQV7 894 aa12.85□□□□□ -0.35
RETREG1-206ENST00000510362 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
RETREG1-206ENST00000510362 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
RETREG1-206ENST00000510362 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
RETREG1-206ENST00000510362 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
RETREG1-206ENST00000510362 JUNDP17535 347 aa12.84□□□□□ -0.35
RETREG1-206ENST00000510362 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
RETREG1-206ENST00000510362 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
RETREG1-206ENST00000510362 ATP7BP35670 1465 aa12.84□□□□□ -0.35
RETREG1-206ENST00000510362 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
RETREG1-206ENST00000510362 PSME1Q06323 249 aa12.83□□□□□ -0.36
RETREG1-206ENST00000510362 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
RETREG1-206ENST00000510362 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
RETREG1-206ENST00000510362 MARF1Q9Y4F3 1742 aaKnown RBP12.82□□□□□ -0.36
RETREG1-206ENST00000510362 SOCS7O14512 581 aa12.82□□□□□ -0.36
RETREG1-206ENST00000510362 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
RETREG1-206ENST00000510362 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
RETREG1-206ENST00000510362 TNS3Q68CZ2 1445 aa12.81□□□□□ -0.36
RETREG1-206ENST00000510362 DXOO77932 396 aaKnown RBP12.81□□□□□ -0.36
RETREG1-206ENST00000510362 KCNC4Q03721 635 aa12.81□□□□□ -0.36
RETREG1-206ENST00000510362 NBPF8Q3BBV2 869 aa12.81□□□□□ -0.36
RETREG1-206ENST00000510362 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
RETREG1-206ENST00000510362 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
RETREG1-206ENST00000510362 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
RETREG1-206ENST00000510362 MMP16P51512 607 aa12.8□□□□□ -0.36
RETREG1-206ENST00000510362 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
RETREG1-206ENST00000510362 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
RETREG1-206ENST00000510362 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
RETREG1-206ENST00000510362 SLC6A16Q9GZN6 736 aa12.8□□□□□ -0.36
RETREG1-206ENST00000510362 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
RETREG1-206ENST00000510362 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
RETREG1-206ENST00000510362 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
RETREG1-206ENST00000510362 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
RETREG1-206ENST00000510362 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
RETREG1-206ENST00000510362 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
RETREG1-206ENST00000510362 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
RETREG1-206ENST00000510362 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
RETREG1-206ENST00000510362 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
RETREG1-206ENST00000510362 PTPRNQ16849 979 aa12.78□□□□□ -0.36
RETREG1-206ENST00000510362 ZNF772Q68DY9 489 aaPredicted RBP12.78□□□□□ -0.36
RETREG1-206ENST00000510362 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
RETREG1-206ENST00000510362 POM121Q96HA1 1249 aa12.78□□□□□ -0.36
RETREG1-206ENST00000510362 EVC2Q86UK5 1308 aa12.78□□□□□ -0.36
RETREG1-206ENST00000510362 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
RETREG1-206ENST00000510362 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.37
RETREG1-206ENST00000510362 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
RETREG1-206ENST00000510362 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
RETREG1-206ENST00000510362 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
RETREG1-206ENST00000510362 S1PR4O95977 384 aa12.76□□□□□ -0.37
RETREG1-206ENST00000510362 POLR3AO14802 1390 aaPredicted RBP12.76□□□□□ -0.37
RETREG1-206ENST00000510362 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
RETREG1-206ENST00000510362 APBB1O00213 710 aa12.75□□□□□ -0.37
RETREG1-206ENST00000510362 AFF2P51816 1311 aa12.75□□□□□ -0.37
RETREG1-206ENST00000510362 EPS8L1Q8TE68 723 aa12.75□□□□□ -0.37
RETREG1-206ENST00000510362 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
RETREG1-206ENST00000510362 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms