RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CHMP4BQ9H444 224 aaKnown RBP21.32■■□□□ 1
SCAMP1-203ENST00000510030 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
SCAMP1-203ENST00000510030 C5P01031 1676 aa21.31■■□□□ 1
SCAMP1-203ENST00000510030 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
SCAMP1-203ENST00000510030 KCNQ3O43525 872 aa21.31■■□□□ 1
SCAMP1-203ENST00000510030 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
SCAMP1-203ENST00000510030 SLC4A2P04920 1241 aa21.3■■□□□ 1
SCAMP1-203ENST00000510030 R3HDM1Q15032 1099 aaKnown RBP21.3■■□□□ 1
SCAMP1-203ENST00000510030 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
SCAMP1-203ENST00000510030 NOB1Q9ULX3 412 aaKnown RBP21.3■■□□□ 1
SCAMP1-203ENST00000510030 ZNF831Q5JPB2 1677 aa21.3■■□□□ 1
SCAMP1-203ENST00000510030 PLIN1O60240 522 aa21.29■■□□□ 1
SCAMP1-203ENST00000510030 HMGB2P26583 209 aaKnown RBP21.29■■□□□ 1
SCAMP1-203ENST00000510030 HYPKQ9NX55 129 aa21.29■■□□□ 1
SCAMP1-203ENST00000510030 FAM196AQ6ZSG2 479 aa21.28■■□□□ 1
SCAMP1-203ENST00000510030 ATG3Q9NT62 314 aa21.28■■□□□ 1
SCAMP1-203ENST00000510030 LRP5O75197 1615 aa21.27■■□□□ 1
SCAMP1-203ENST00000510030 TRIM27P14373 513 aa21.27■■□□□ 1
SCAMP1-203ENST00000510030 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
SCAMP1-203ENST00000510030 STARD3NLO95772 234 aa21.26■□□□□ 0.99
SCAMP1-203ENST00000510030 DDX21Q9NR30 783 aaKnown RBP eCLIP21.26■□□□□ 0.99
SCAMP1-203ENST00000510030 SBF2Q86WG5 1849 aa21.26■□□□□ 0.99
SCAMP1-203ENST00000510030 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
SCAMP1-203ENST00000510030 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
SCAMP1-203ENST00000510030 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
SCAMP1-203ENST00000510030 PTCD1O75127 700 aaKnown RBP21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 APBA3O96018 575 aa21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 IRX6P78412 446 aaPredicted RBP21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 FLIIQ13045 1269 aa21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 ACSBG1Q96GR2 724 aa21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 CHPF2Q9P2E5 772 aa21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 DDX19BQ9UMR2 479 aa21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 ABCC4O15439 1325 aa21.24■□□□□ 0.99
SCAMP1-203ENST00000510030 BTAF1O14981 1849 aa21.23■□□□□ 0.99
SCAMP1-203ENST00000510030 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
SCAMP1-203ENST00000510030 PALLDQ8WX93 1383 aa21.23■□□□□ 0.99
SCAMP1-203ENST00000510030 FKBP5Q13451 457 aaPredicted RBP21.22■□□□□ 0.99
SCAMP1-203ENST00000510030 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
SCAMP1-203ENST00000510030 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
SCAMP1-203ENST00000510030 PPP4R2Q9NY27 417 aa21.22■□□□□ 0.99
SCAMP1-203ENST00000510030 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
SCAMP1-203ENST00000510030 PTF1AQ7RTS3 328 aa21.21■□□□□ 0.99
SCAMP1-203ENST00000510030 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
SCAMP1-203ENST00000510030 CCT4P50991 539 aaKnown RBP21.2■□□□□ 0.98
SCAMP1-203ENST00000510030 CRBNQ96SW2 442 aa21.2■□□□□ 0.98
SCAMP1-203ENST00000510030 BCL11BQ9C0K0 894 aaPredicted RBP21.2■□□□□ 0.98
SCAMP1-203ENST00000510030 RREB1Q92766 1687 aa21.2■□□□□ 0.98
SCAMP1-203ENST00000510030 TJP1Q07157 1748 aa21.2■□□□□ 0.98
SCAMP1-203ENST00000510030 NUP188Q5SRE5 1749 aa21.2■□□□□ 0.98
SCAMP1-203ENST00000510030 C20orf194Q5TEA3 1177 aa21.19■□□□□ 0.98
SCAMP1-203ENST00000510030 PANK1Q8TE04 598 aa21.19■□□□□ 0.98
SCAMP1-203ENST00000510030 CLUAP1Q96AJ1 413 aa21.19■□□□□ 0.98
SCAMP1-203ENST00000510030 ITPRIPQ8IWB1 547 aa21.18■□□□□ 0.98
SCAMP1-203ENST00000510030 USP16Q9Y5T5 823 aa21.18■□□□□ 0.98
SCAMP1-203ENST00000510030 LOC102724428A0A0B4J2F2 783 aa21.17■□□□□ 0.98
SCAMP1-203ENST00000510030 SIK1P57059 783 aa21.17■□□□□ 0.98
SCAMP1-203ENST00000510030 INTS3Q68E01 1043 aaKnown RBP21.17■□□□□ 0.98
SCAMP1-203ENST00000510030 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
SCAMP1-203ENST00000510030 COG6Q9Y2V7 657 aa21.17■□□□□ 0.98
SCAMP1-203ENST00000510030 LY75O60449 1722 aa21.16■□□□□ 0.98
SCAMP1-203ENST00000510030 PRAMEF22A3QJZ6 481 aa21.16■□□□□ 0.98
SCAMP1-203ENST00000510030 KCNQ2O43526 872 aa21.16■□□□□ 0.98
SCAMP1-203ENST00000510030 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
SCAMP1-203ENST00000510030 ATP6V1AP38606 617 aa21.15■□□□□ 0.98
SCAMP1-203ENST00000510030 PDIA6Q15084 440 aa21.15■□□□□ 0.98
SCAMP1-203ENST00000510030 COL5A3P25940 1745 aaPredicted RBP21.15■□□□□ 0.98
SCAMP1-203ENST00000510030 ATP10DQ9P241 1426 aa21.14■□□□□ 0.98
SCAMP1-203ENST00000510030 IBTKQ9P2D0 1353 aaPredicted RBP21.14■□□□□ 0.98
SCAMP1-203ENST00000510030 RLBP1P12271 317 aa21.14■□□□□ 0.97
SCAMP1-203ENST00000510030 KSR2Q6VAB6 950 aa21.14■□□□□ 0.97
SCAMP1-203ENST00000510030 G2E3Q7L622 706 aa21.14■□□□□ 0.97
SCAMP1-203ENST00000510030 DNAJC10Q8IXB1 793 aa21.14■□□□□ 0.97
SCAMP1-203ENST00000510030 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.97
SCAMP1-203ENST00000510030 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
SCAMP1-203ENST00000510030 PHAXQ9H814 394 aaKnown RBP21.13■□□□□ 0.97
SCAMP1-203ENST00000510030 CYP19A1P11511 503 aaPredicted RBP21.12■□□□□ 0.97
SCAMP1-203ENST00000510030 MYL6BP14649 208 aa21.12■□□□□ 0.97
SCAMP1-203ENST00000510030 NEXNQ0ZGT2 675 aa21.12■□□□□ 0.97
SCAMP1-203ENST00000510030 HDAC5Q9UQL6 1122 aa21.12■□□□□ 0.97
SCAMP1-203ENST00000510030 CCDC136Q96JN2 1154 aa21.11■□□□□ 0.97
SCAMP1-203ENST00000510030 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 IL6STP40189 918 aaPredicted RBP21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 PROSER3Q2NL68 480 aa21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 SLC4A10Q6U841 1118 aa21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 CCDC87Q9NVE4 849 aa21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 RGPD3A6NKT7 1758 aaPredicted RBP21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 RGPD4Q7Z3J3 1758 aa21.1■□□□□ 0.97
SCAMP1-203ENST00000510030 SLC27A3Q5K4L6 730 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 KIF6Q6ZMV9 814 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 ANKRD13DQ6ZTN6 518 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 COPS6Q7L5N1 327 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 RIC3Q7Z5B4 369 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 PLBD2Q8NHP8 589 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 XAGE3Q8WTP9 111 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 SRCIN1Q9C0H9 1055 aa21.09■□□□□ 0.97
SCAMP1-203ENST00000510030 CNTNAP4Q9C0A0 1308 aa21.08■□□□□ 0.97
SCAMP1-203ENST00000510030 ARFGEF2Q9Y6D5 1785 aa21.08■□□□□ 0.97
SCAMP1-203ENST00000510030 ALDH1L1O75891 902 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms