RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
SCARB2-204ENST00000509994 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
SCARB2-204ENST00000509994 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-204ENST00000509994 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-204ENST00000509994 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
SCARB2-204ENST00000509994 ZBTB1Q9Y2K1 713 aa13.56□□□□□ -0.24
SCARB2-204ENST00000509994 SOS1Q07889 1333 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-204ENST00000509994 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-204ENST00000509994 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
SCARB2-204ENST00000509994 ARFGEF1Q9Y6D6 1849 aa13.55□□□□□ -0.24
SCARB2-204ENST00000509994 STARD3NLO95772 234 aa13.55□□□□□ -0.24
SCARB2-204ENST00000509994 DDR1Q08345 913 aa13.54□□□□□ -0.24
SCARB2-204ENST00000509994 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
SCARB2-204ENST00000509994 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
SCARB2-204ENST00000509994 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
SCARB2-204ENST00000509994 NPHP1O15259 732 aa13.53□□□□□ -0.24
SCARB2-204ENST00000509994 NEFMP07197 916 aa13.53□□□□□ -0.24
SCARB2-204ENST00000509994 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
SCARB2-204ENST00000509994 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
SCARB2-204ENST00000509994 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
SCARB2-204ENST00000509994 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
SCARB2-204ENST00000509994 ADCY9O60503 1353 aa13.53□□□□□ -0.24
SCARB2-204ENST00000509994 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
SCARB2-204ENST00000509994 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.25
SCARB2-204ENST00000509994 CHRNA5P30532 468 aa13.52□□□□□ -0.25
SCARB2-204ENST00000509994 ZNF790Q6PG37 636 aa13.52□□□□□ -0.25
SCARB2-204ENST00000509994 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
SCARB2-204ENST00000509994 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-204ENST00000509994 FMNL2Q96PY5 1086 aa13.52□□□□□ -0.25
SCARB2-204ENST00000509994 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
SCARB2-204ENST00000509994 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
SCARB2-204ENST00000509994 A0A087WZG4 1122 aa13.51□□□□□ -0.25
SCARB2-204ENST00000509994 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
SCARB2-204ENST00000509994 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-204ENST00000509994 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
SCARB2-204ENST00000509994 NFIXQ14938 502 aa13.5□□□□□ -0.25
SCARB2-204ENST00000509994 SERPINB2P05120 415 aa13.49□□□□□ -0.25
SCARB2-204ENST00000509994 TM4SF1P30408 202 aa13.49□□□□□ -0.25
SCARB2-204ENST00000509994 MCM10Q7L590 875 aa13.49□□□□□ -0.25
SCARB2-204ENST00000509994 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
SCARB2-204ENST00000509994 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
SCARB2-204ENST00000509994 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
SCARB2-204ENST00000509994 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
SCARB2-204ENST00000509994 KCNA3P22001 575 aa13.48□□□□□ -0.25
SCARB2-204ENST00000509994 C9orf131Q5VYM1 1079 aa13.48□□□□□ -0.25
SCARB2-204ENST00000509994 RNF181Q9P0P0 153 aa13.48□□□□□ -0.25
SCARB2-204ENST00000509994 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
SCARB2-204ENST00000509994 C2CD5Q86YS7 1000 aa13.47□□□□□ -0.25
SCARB2-204ENST00000509994 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-204ENST00000509994 CCDC88AQ3V6T2 1871 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 H0YIN7 160 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 KCNQ3O43525 872 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 A1BGP04217 495 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-204ENST00000509994 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
SCARB2-204ENST00000509994 DCTN1Q14203 1278 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 CEP350Q5VT06 3117 aa13.46□□□□□ -0.25
SCARB2-204ENST00000509994 SBF1O95248 1867 aa13.46□□□□□ -0.26
SCARB2-204ENST00000509994 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
SCARB2-204ENST00000509994 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
SCARB2-204ENST00000509994 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
SCARB2-204ENST00000509994 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCARB2-204ENST00000509994 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
SCARB2-204ENST00000509994 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
SCARB2-204ENST00000509994 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
SCARB2-204ENST00000509994 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
SCARB2-204ENST00000509994 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
SCARB2-204ENST00000509994 CCDC24Q8N4L8 307 aa13.44□□□□□ -0.26
SCARB2-204ENST00000509994 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
SCARB2-204ENST00000509994 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
SCARB2-204ENST00000509994 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-204ENST00000509994 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 SNRPA1P09661 255 aaKnown RBP13.43□□□□□ -0.26
SCARB2-204ENST00000509994 ST5P78524 1137 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 RASSF7Q02833 373 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
SCARB2-204ENST00000509994 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-204ENST00000509994 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
SCARB2-204ENST00000509994 KIF3CO14782 793 aa13.42□□□□□ -0.26
SCARB2-204ENST00000509994 HSPA6P17066 643 aa13.42□□□□□ -0.26
SCARB2-204ENST00000509994 PDE6BP35913 854 aa13.42□□□□□ -0.26
SCARB2-204ENST00000509994 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
SCARB2-204ENST00000509994 TNRC6CQ9HCJ0 1690 aaKnown RBP13.42□□□□□ -0.26
SCARB2-204ENST00000509994 HTATSF1O43719 755 aaKnown RBP13.41□□□□□ -0.26
SCARB2-204ENST00000509994 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-204ENST00000509994 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
SCARB2-204ENST00000509994 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
SCARB2-204ENST00000509994 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
SCARB2-204ENST00000509994 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
SCARB2-204ENST00000509994 CAMTA2O94983 1202 aa13.4□□□□□ -0.26
SCARB2-204ENST00000509994 PRR5LQ6MZQ0 368 aa13.4□□□□□ -0.26
SCARB2-204ENST00000509994 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-204ENST00000509994 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
SCARB2-204ENST00000509994 BRIP1Q9BX63 1249 aa13.4□□□□□ -0.26
SCARB2-204ENST00000509994 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
SCARB2-204ENST00000509994 TOMM70O94826 608 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms