RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PIM2Q9P1W9 311 aa21.67■■□□□ 1.06
RAB40C-202ENST00000509637 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
RAB40C-202ENST00000509637 AFDNP55196 1824 aaKnown RBP21.66■■□□□ 1.06
RAB40C-202ENST00000509637 DNAJC5GQ8N7S2 189 aa21.65■■□□□ 1.06
RAB40C-202ENST00000509637 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
RAB40C-202ENST00000509637 SBF1O95248 1867 aa21.64■■□□□ 1.05
RAB40C-202ENST00000509637 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
RAB40C-202ENST00000509637 DALRD3Q5D0E6 543 aaKnown RBP21.63■■□□□ 1.05
RAB40C-202ENST00000509637 IFFO2Q5TF58 517 aa21.63■■□□□ 1.05
RAB40C-202ENST00000509637 NARFQ9UHQ1 456 aa21.63■■□□□ 1.05
RAB40C-202ENST00000509637 NRXN2Q9P2S2 1712 aa21.63■■□□□ 1.05
RAB40C-202ENST00000509637 UBR2Q8IWV8 1755 aa21.62■■□□□ 1.05
RAB40C-202ENST00000509637 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-202ENST00000509637 CARMIL3Q8ND23 1372 aa21.61■■□□□ 1.05
RAB40C-202ENST00000509637 TOMM70O94826 608 aa21.61■■□□□ 1.05
RAB40C-202ENST00000509637 COL15A1P39059 1388 aa21.61■■□□□ 1.05
RAB40C-202ENST00000509637 ZPR1O75312 459 aa21.6■■□□□ 1.05
RAB40C-202ENST00000509637 RASSF7Q02833 373 aa21.6■■□□□ 1.05
RAB40C-202ENST00000509637 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-202ENST00000509637 KCNQ3O43525 872 aa21.59■■□□□ 1.05
RAB40C-202ENST00000509637 SERPINB2P05120 415 aa21.59■■□□□ 1.05
RAB40C-202ENST00000509637 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
RAB40C-202ENST00000509637 EIF5P55010 431 aaKnown RBP21.59■■□□□ 1.05
RAB40C-202ENST00000509637 HTRA3P83110 453 aa21.59■■□□□ 1.05
RAB40C-202ENST00000509637 RNF181Q9P0P0 153 aa21.58■■□□□ 1.05
RAB40C-202ENST00000509637 VSIG10Q8N0Z9 540 aa21.57■■□□□ 1.04
RAB40C-202ENST00000509637 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
RAB40C-202ENST00000509637 RRAGCQ9HB90 399 aa21.56■■□□□ 1.04
RAB40C-202ENST00000509637 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
RAB40C-202ENST00000509637 CCDC24Q8N4L8 307 aa21.55■■□□□ 1.04
RAB40C-202ENST00000509637 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
RAB40C-202ENST00000509637 TBC1D9BQ66K14 1250 aa21.54■■□□□ 1.04
RAB40C-202ENST00000509637 BICDL1Q6ZP65 573 aa21.54■■□□□ 1.04
RAB40C-202ENST00000509637 ANKRD31Q8N7Z5 1873 aa21.54■■□□□ 1.04
RAB40C-202ENST00000509637 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
RAB40C-202ENST00000509637 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
RAB40C-202ENST00000509637 APLP1P51693 650 aa21.53■■□□□ 1.04
RAB40C-202ENST00000509637 ZNF790Q6PG37 636 aa21.53■■□□□ 1.04
RAB40C-202ENST00000509637 RBM46Q8TBY0 533 aaKnown RBP21.53■■□□□ 1.04
RAB40C-202ENST00000509637 DLEC1Q9Y238 1755 aa21.53■■□□□ 1.04
RAB40C-202ENST00000509637 A1BGP04217 495 aa21.52■■□□□ 1.04
RAB40C-202ENST00000509637 TBC1D2BQ9UPU7 963 aa21.52■■□□□ 1.04
RAB40C-202ENST00000509637 PRAMEF22A3QJZ6 481 aa21.51■■□□□ 1.03
RAB40C-202ENST00000509637 GNAT3A8MTJ3 354 aa21.51■■□□□ 1.03
RAB40C-202ENST00000509637 NFKBIEO00221 500 aa21.51■■□□□ 1.03
RAB40C-202ENST00000509637 C2CD5Q86YS7 1000 aa21.51■■□□□ 1.03
RAB40C-202ENST00000509637 CEMIPQ8WUJ3 1361 aa21.5■■□□□ 1.03
RAB40C-202ENST00000509637 RSPH6AQ9H0K4 717 aa21.5■■□□□ 1.03
RAB40C-202ENST00000509637 CCDC88AQ3V6T2 1871 aa21.49■■□□□ 1.03
RAB40C-202ENST00000509637 PIP4K2AP48426 406 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-202ENST00000509637 POTECB2RU33 542 aa21.48■■□□□ 1.03
RAB40C-202ENST00000509637 TTLL6Q8N841 843 aa21.48■■□□□ 1.03
RAB40C-202ENST00000509637 USP16Q9Y5T5 823 aa21.48■■□□□ 1.03
RAB40C-202ENST00000509637 WDR90Q96KV7 1748 aa21.48■■□□□ 1.03
RAB40C-202ENST00000509637 CAMTA2O94983 1202 aa21.47■■□□□ 1.03
RAB40C-202ENST00000509637 STARD3NLO95772 234 aa21.47■■□□□ 1.03
RAB40C-202ENST00000509637 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
RAB40C-202ENST00000509637 PRR5LQ6MZQ0 368 aa21.47■■□□□ 1.03
RAB40C-202ENST00000509637 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
RAB40C-202ENST00000509637 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
RAB40C-202ENST00000509637 TEFQ10587 303 aa21.46■■□□□ 1.03
RAB40C-202ENST00000509637 GAS2L2Q8NHY3 880 aa21.46■■□□□ 1.03
RAB40C-202ENST00000509637 SCN7AQ01118 1682 aa21.45■■□□□ 1.02
RAB40C-202ENST00000509637 LMNB1P20700 586 aa21.45■■□□□ 1.02
RAB40C-202ENST00000509637 KDM2BQ8NHM5 1336 aa21.45■■□□□ 1.02
RAB40C-202ENST00000509637 H0YIN7 160 aa21.44■■□□□ 1.02
RAB40C-202ENST00000509637 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
RAB40C-202ENST00000509637 FSTL1Q12841 308 aa21.44■■□□□ 1.02
RAB40C-202ENST00000509637 ZNF219Q9P2Y4 722 aaPredicted RBP21.44■■□□□ 1.02
RAB40C-202ENST00000509637 ZNF330Q9Y3S2 320 aaPredicted RBP21.44■■□□□ 1.02
RAB40C-202ENST00000509637 GLTPD2A6NH11 291 aa21.43■■□□□ 1.02
RAB40C-202ENST00000509637 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
RAB40C-202ENST00000509637 TNRC6CQ9HCJ0 1690 aaKnown RBP21.43■■□□□ 1.02
RAB40C-202ENST00000509637 A0A087WZG4 1122 aa21.42■■□□□ 1.02
RAB40C-202ENST00000509637 SLX4Q8IY92 1834 aa21.42■■□□□ 1.02
RAB40C-202ENST00000509637 FMNL2Q96PY5 1086 aa21.42■■□□□ 1.02
RAB40C-202ENST00000509637 BRIP1Q9BX63 1249 aa21.42■■□□□ 1.02
RAB40C-202ENST00000509637 BTBD11A6QL63 1104 aa21.41■■□□□ 1.02
RAB40C-202ENST00000509637 C21orf2O43822 256 aa21.41■■□□□ 1.02
RAB40C-202ENST00000509637 PPP2R1AP30153 589 aa21.41■■□□□ 1.02
RAB40C-202ENST00000509637 MCM10Q7L590 875 aa21.41■■□□□ 1.02
RAB40C-202ENST00000509637 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-202ENST00000509637 ZNF622Q969S3 477 aaKnown RBP eCLIP21.41■■□□□ 1.02
RAB40C-202ENST00000509637 KLRG1Q96E93 195 aa21.41■■□□□ 1.02
RAB40C-202ENST00000509637 TEX13AQ9BXU3 409 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-202ENST00000509637 FER1L6Q2WGJ9 1857 aa21.41■■□□□ 1.02
RAB40C-202ENST00000509637 NBPF26B4DH59 902 aa21.4■■□□□ 1.02
RAB40C-202ENST00000509637 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
RAB40C-202ENST00000509637 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
RAB40C-202ENST00000509637 JMYQ8N9B5 988 aa21.4■■□□□ 1.02
RAB40C-202ENST00000509637 TIAM2Q8IVF5 1701 aa21.39■■□□□ 1.01
RAB40C-202ENST00000509637 BCORQ6W2J9 1755 aa21.38■■□□□ 1.01
RAB40C-202ENST00000509637 ZC3H4Q9UPT8 1303 aaKnown RBP21.37■■□□□ 1.01
RAB40C-202ENST00000509637 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
RAB40C-202ENST00000509637 SRGNP10124 158 aa21.36■■□□□ 1.01
RAB40C-202ENST00000509637 VEGFAP15692 232 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-202ENST00000509637 SMC1BQ8NDV3 1235 aa21.36■■□□□ 1.01
RAB40C-202ENST00000509637 C7orf43Q8WVR3 580 aa21.36■■□□□ 1.01
RAB40C-202ENST00000509637 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
RAB40C-202ENST00000509637 DICER1Q9UPY3 1922 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms