RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 UBR2Q8IWV8 1755 aa9.76□□□□□ -0.85
TOPBP1-207ENST00000509162 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-207ENST00000509162 BAG6P46379 1132 aa9.76□□□□□ -0.85
TOPBP1-207ENST00000509162 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
TOPBP1-207ENST00000509162 KCPQ6ZWJ8 1503 aa9.76□□□□□ -0.85
TOPBP1-207ENST00000509162 QSER1Q2KHR3 1735 aa9.76□□□□□ -0.85
TOPBP1-207ENST00000509162 STK25O00506 426 aa9.75□□□□□ -0.85
TOPBP1-207ENST00000509162 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-207ENST00000509162 KCNQ4P56696 695 aa9.75□□□□□ -0.85
TOPBP1-207ENST00000509162 ZNF827Q17R98 1081 aa9.75□□□□□ -0.85
TOPBP1-207ENST00000509162 CCDC184Q52MB2 194 aa9.75□□□□□ -0.85
TOPBP1-207ENST00000509162 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-207ENST00000509162 DLG5Q8TDM6 1919 aa9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 MTHFSDQ2M296 383 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 AMIGO3Q86WK7 504 aa9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 PDGFDQ9GZP0 370 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 PRKRIP1Q9H875 184 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
TOPBP1-207ENST00000509162 C4BP0C0L5 1744 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 COL24A1Q17RW2 1714 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 PLSCR1O15162 318 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 TXNRD1Q16881 649 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 ZNF530Q6P9A1 599 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 PHACTR3Q96KR7 559 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 SLC4A9Q96Q91 983 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 PALLDQ8WX93 1383 aa9.73□□□□□ -0.85
TOPBP1-207ENST00000509162 UBR3Q6ZT12 1888 aa9.72□□□□□ -0.85
TOPBP1-207ENST00000509162 PIGBQ92521 554 aa9.72□□□□□ -0.85
TOPBP1-207ENST00000509162 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-207ENST00000509162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 PRKAR2BP31323 418 aa9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 R3HDM1Q15032 1099 aaKnown RBP9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 C3orf67Q6ZVT6 689 aa9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 IFNL2Q8IZJ0 200 aa9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 PLEKHF1Q96S99 279 aa9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 SPG7Q9UQ90 795 aa9.71□□□□□ -0.86
TOPBP1-207ENST00000509162 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 KDM3BQ7LBC6 1761 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 EFCAB3Q8N7B9 438 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 LGR6Q9HBX8 967 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
TOPBP1-207ENST00000509162 ITPK1Q13572 414 aa9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 RALBP1Q15311 655 aa9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 MYH14Q7Z406 1995 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 ATG3Q9NT62 314 aa9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 RYDENQ9NUL5 291 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
TOPBP1-207ENST00000509162 AMOTQ4VCS5 1084 aa9.68□□□□□ -0.86
TOPBP1-207ENST00000509162 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
TOPBP1-207ENST00000509162 LINC00116Q8NCU8 138 aa9.68□□□□□ -0.86
TOPBP1-207ENST00000509162 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
TOPBP1-207ENST00000509162 PNPLA7Q6ZV29 1317 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 SNPHO15079 494 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 RNMTO43148 476 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 U2AF1L5P0DN76 240 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 U2AF1Q01081 240 aaKnown RBP eCLIP9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 IL17REQ8NFR9 667 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 DCAF5Q96JK2 942 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
TOPBP1-207ENST00000509162 G3V3G9 751 aa9.66□□□□□ -0.86
TOPBP1-207ENST00000509162 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
TOPBP1-207ENST00000509162 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
TOPBP1-207ENST00000509162 ERVV-2B6SEH9 535 aa9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 SLC15A2Q16348 729 aa9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 TMOD3Q9NYL9 352 aa9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 CCNL1Q9UK58 526 aaPredicted RBP9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
TOPBP1-207ENST00000509162 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.87
TOPBP1-207ENST00000509162 LAMB4A4D0S4 1761 aa9.65□□□□□ -0.87
TOPBP1-207ENST00000509162 LOC102724428A0A0B4J2F2 783 aa9.64□□□□□ -0.87
TOPBP1-207ENST00000509162 KCNQ3O43525 872 aa9.64□□□□□ -0.87
TOPBP1-207ENST00000509162 SIK1P57059 783 aa9.64□□□□□ -0.87
TOPBP1-207ENST00000509162 SLC39A6Q13433 755 aa9.64□□□□□ -0.87
TOPBP1-207ENST00000509162 THUMPD2Q9BTF0 503 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-207ENST00000509162 SCN7AQ01118 1682 aa9.64□□□□□ -0.87
TOPBP1-207ENST00000509162 KIAA1551Q9HCM1 1747 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 FCHSD2O94868 740 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 C1orf141Q5JVX7 400 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 SLC27A3Q5K4L6 730 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 MCM10Q7L590 875 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 CCDC146Q8IYE0 955 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 GAS2L2Q8NHY3 880 aa9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
TOPBP1-207ENST00000509162 UTRNP46939 3433 aa9.62□□□□□ -0.87
TOPBP1-207ENST00000509162 ST18O60284 1047 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms