RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 DDR1Q08345 913 aa30.63■■■□□ 2.49
RETREG1-204ENST00000509048 NARFQ9UHQ1 456 aa30.63■■■□□ 2.49
RETREG1-204ENST00000509048 WWC3Q9ULE0 1092 aa30.63■■■□□ 2.49
RETREG1-204ENST00000509048 N4BP2Q86UW6 1770 aaPredicted RBP30.62■■■□□ 2.49
RETREG1-204ENST00000509048 TM4SF1P30408 202 aa30.62■■■□□ 2.49
RETREG1-204ENST00000509048 TEX13AQ9BXU3 409 aaPredicted RBP30.62■■■□□ 2.49
RETREG1-204ENST00000509048 BTBD11A6QL63 1104 aa30.61■■■□□ 2.49
RETREG1-204ENST00000509048 RTF1Q92541 710 aaKnown RBP30.61■■■□□ 2.49
RETREG1-204ENST00000509048 FMNL2Q96PY5 1086 aa30.61■■■□□ 2.49
RETREG1-204ENST00000509048 A0A0G2JLW4 131 aa30.6■■■□□ 2.49
RETREG1-204ENST00000509048 POLRMTO00411 1230 aaKnown RBP30.6■■■□□ 2.49
RETREG1-204ENST00000509048 HTATSF1O43719 755 aaKnown RBP30.6■■■□□ 2.49
RETREG1-204ENST00000509048 CANXP27824 592 aaKnown RBP30.59■■■□□ 2.49
RETREG1-204ENST00000509048 EIF5P55010 431 aaKnown RBP30.59■■■□□ 2.49
RETREG1-204ENST00000509048 MCM10Q7L590 875 aa30.59■■■□□ 2.49
RETREG1-204ENST00000509048 KCNQ3O43525 872 aa30.57■■■□□ 2.48
RETREG1-204ENST00000509048 DPEP1P16444 411 aa30.57■■■□□ 2.48
RETREG1-204ENST00000509048 BCL2L12Q9HB09 334 aa30.56■■■□□ 2.48
RETREG1-204ENST00000509048 BRCA1P38398 1863 aaKnown RBP30.56■■■□□ 2.48
RETREG1-204ENST00000509048 PLEKHF1Q96S99 279 aa30.55■■■□□ 2.48
RETREG1-204ENST00000509048 ADCY9O60503 1353 aa30.54■■■□□ 2.48
RETREG1-204ENST00000509048 KCNA3P22001 575 aa30.54■■■□□ 2.48
RETREG1-204ENST00000509048 DCTN1Q14203 1278 aa30.54■■■□□ 2.48
RETREG1-204ENST00000509048 NFIXQ14938 502 aa30.54■■■□□ 2.48
RETREG1-204ENST00000509048 RALBP1Q15311 655 aa30.54■■■□□ 2.48
RETREG1-204ENST00000509048 A0A087WZG4 1122 aa30.53■■■□□ 2.48
RETREG1-204ENST00000509048 BCS1LQ9Y276 419 aa30.52■■■□□ 2.48
RETREG1-204ENST00000509048 NRXN2Q9P2S2 1712 aa30.52■■■□□ 2.48
RETREG1-204ENST00000509048 NEFMP07197 916 aa30.51■■■□□ 2.47
RETREG1-204ENST00000509048 IL6STP40189 918 aaPredicted RBP30.51■■■□□ 2.47
RETREG1-204ENST00000509048 ATP10DQ9P241 1426 aa30.5■■■□□ 2.47
RETREG1-204ENST00000509048 DDX10Q13206 875 aaKnown RBP30.5■■■□□ 2.47
RETREG1-204ENST00000509048 AFDNP55196 1824 aaKnown RBP30.5■■■□□ 2.47
RETREG1-204ENST00000509048 A1BGP04217 495 aa30.49■■■□□ 2.47
RETREG1-204ENST00000509048 DLG5Q8TDM6 1919 aa30.49■■■□□ 2.47
RETREG1-204ENST00000509048 USP16Q9Y5T5 823 aa30.48■■■□□ 2.47
RETREG1-204ENST00000509048 SCN7AQ01118 1682 aa30.48■■■□□ 2.47
RETREG1-204ENST00000509048 TAF7Q15545 349 aaPredicted RBP30.47■■■□□ 2.47
RETREG1-204ENST00000509048 PNNQ9H307 717 aaKnown RBP30.47■■■□□ 2.47
RETREG1-204ENST00000509048 PIM2Q9P1W9 311 aa30.47■■■□□ 2.47
RETREG1-204ENST00000509048 SNRPA1P09661 255 aaKnown RBP30.46■■■□□ 2.47
RETREG1-204ENST00000509048 NFE2L2Q16236 605 aa30.46■■■□□ 2.47
RETREG1-204ENST00000509048 ARFGEF1Q9Y6D6 1849 aa30.45■■■□□ 2.47
RETREG1-204ENST00000509048 PRAMEF22A3QJZ6 481 aa30.45■■■□□ 2.47
RETREG1-204ENST00000509048 SERPINB2P05120 415 aa30.45■■■□□ 2.47
RETREG1-204ENST00000509048 GIGYF1O75420 1035 aaPredicted RBP30.44■■■□□ 2.46
RETREG1-204ENST00000509048 TBC1D2BQ9UPU7 963 aa30.44■■■□□ 2.46
RETREG1-204ENST00000509048 ZNF330Q9Y3S2 320 aaPredicted RBP30.44■■■□□ 2.46
RETREG1-204ENST00000509048 CHRNA5P30532 468 aa30.43■■■□□ 2.46
RETREG1-204ENST00000509048 C1QTNF8P60827 252 aa30.43■■■□□ 2.46
RETREG1-204ENST00000509048 TBC1D9BQ66K14 1250 aa30.42■■■□□ 2.46
RETREG1-204ENST00000509048 DALRD3Q5D0E6 543 aaKnown RBP30.41■■■□□ 2.46
RETREG1-204ENST00000509048 MYBBP1AQ9BQG0 1328 aaKnown RBP30.41■■■□□ 2.46
RETREG1-204ENST00000509048 MAPK8IP3Q9UPT6 1336 aa30.41■■■□□ 2.46
RETREG1-204ENST00000509048 CAMTA2O94983 1202 aa30.4■■■□□ 2.46
RETREG1-204ENST00000509048 BICDL1Q6ZP65 573 aa30.4■■■□□ 2.46
RETREG1-204ENST00000509048 ARHGAP27Q6ZUM4 889 aa30.4■■■□□ 2.46
RETREG1-204ENST00000509048 NPM2Q86SE8 214 aaKnown RBP30.4■■■□□ 2.46
RETREG1-204ENST00000509048 PNISRQ8TF01 805 aaKnown RBP30.4■■■□□ 2.46
RETREG1-204ENST00000509048 MIS18AQ9NYP9 233 aa30.39■■■□□ 2.46
RETREG1-204ENST00000509048 BCORQ6W2J9 1755 aa30.38■■■□□ 2.45
RETREG1-204ENST00000509048 KDM3BQ7LBC6 1761 aa30.38■■■□□ 2.45
RETREG1-204ENST00000509048 DZIP3Q86Y13 1208 aaKnown RBP30.38■■■□□ 2.45
RETREG1-204ENST00000509048 PIP4K2AP48426 406 aaPredicted RBP30.37■■■□□ 2.45
RETREG1-204ENST00000509048 GPBP1L1Q9HC44 474 aaPredicted RBP30.37■■■□□ 2.45
RETREG1-204ENST00000509048 CARMIL3Q8ND23 1372 aa30.37■■■□□ 2.45
RETREG1-204ENST00000509048 DLEC1Q9Y238 1755 aa30.36■■■□□ 2.45
RETREG1-204ENST00000509048 THUMPD2Q9BTF0 503 aaKnown RBP30.35■■■□□ 2.45
RETREG1-204ENST00000509048 LAMB4A4D0S4 1761 aa30.34■■■□□ 2.45
RETREG1-204ENST00000509048 NBPF26B4DH59 902 aa30.34■■■□□ 2.45
RETREG1-204ENST00000509048 NBPF10Q6P3W6 841 aaKnown RBP30.34■■■□□ 2.45
RETREG1-204ENST00000509048 NBPF15Q8N660 670 aa30.34■■■□□ 2.45
RETREG1-204ENST00000509048 PRR5LQ6MZQ0 368 aa30.32■■■□□ 2.44
RETREG1-204ENST00000509048 CLEC4GQ6UXB4 293 aa30.32■■■□□ 2.44
RETREG1-204ENST00000509048 ZNF526Q8TF50 670 aaPredicted RBP30.32■■■□□ 2.44
RETREG1-204ENST00000509048 SETDB2Q96T68 719 aa30.32■■■□□ 2.44
RETREG1-204ENST00000509048 EIF4A1P60842 406 aaKnown RBP30.31■■■□□ 2.44
RETREG1-204ENST00000509048 ANKRD31Q8N7Z5 1873 aa30.31■■■□□ 2.44
RETREG1-204ENST00000509048 RGL2O15211 777 aa30.3■■■□□ 2.44
RETREG1-204ENST00000509048 C2CD5Q86YS7 1000 aa30.3■■■□□ 2.44
RETREG1-204ENST00000509048 BRIP1Q9BX63 1249 aa30.3■■■□□ 2.44
RETREG1-204ENST00000509048 H0YIN7 160 aa30.29■■■□□ 2.44
RETREG1-204ENST00000509048 RIPK4P57078 832 aa30.29■■■□□ 2.44
RETREG1-204ENST00000509048 TMPOP42166 694 aaKnown RBP30.28■■■□□ 2.44
RETREG1-204ENST00000509048 PDZRN3Q9UPQ7 1066 aa30.28■■■□□ 2.44
RETREG1-204ENST00000509048 ZNF652Q9Y2D9 606 aa30.28■■■□□ 2.44
RETREG1-204ENST00000509048 C9orf131Q5VYM1 1079 aa30.27■■■□□ 2.44
RETREG1-204ENST00000509048 TTLL6Q8N841 843 aa30.27■■■□□ 2.44
RETREG1-204ENST00000509048 CEP350Q5VT06 3117 aa30.27■■■□□ 2.44
RETREG1-204ENST00000509048 PDE6BP35913 854 aa30.26■■■□□ 2.43
RETREG1-204ENST00000509048 CNBD1Q8NA66 436 aa30.26■■■□□ 2.43
RETREG1-204ENST00000509048 PRKRIP1Q9H875 184 aaPredicted RBP30.25■■■□□ 2.43
RETREG1-204ENST00000509048 LMOD3Q0VAK6 560 aa30.24■■■□□ 2.43
RETREG1-204ENST00000509048 CCDC24Q8N4L8 307 aa30.24■■■□□ 2.43
RETREG1-204ENST00000509048 COL11A2P13942 1736 aaPredicted RBP30.23■■■□□ 2.43
RETREG1-204ENST00000509048 BABAM1Q9NWV8 329 aa30.23■■■□□ 2.43
RETREG1-204ENST00000509048 TSPYL4Q9UJ04 414 aa30.23■■■□□ 2.43
RETREG1-204ENST00000509048 SENP3-EIF4A1A0A087X0R7 540 aa30.22■■■□□ 2.43
RETREG1-204ENST00000509048 SBF1O95248 1867 aa30.22■■■□□ 2.43
RETREG1-204ENST00000509048 KIF3CO14782 793 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms