RNA–Protein interactions for RNA: ENST00000508885.5

LINC00461-208, long intergenic non-protein coding RNA 461, human

TSL 4

Gene LINC00461, Length 558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00461-208	ENST00000508885	KDM2B	Q8NHM5	1336 aa		11.27	□□□□□ -0.61
LINC00461-208	ENST00000508885	HTRA3	P83110	453 aa		11.26	□□□□□ -0.61
LINC00461-208	ENST00000508885	NFIX	Q14938	502 aa		11.26	□□□□□ -0.61
LINC00461-208	ENST00000508885	CCER1	Q8TC90	406 aa	Predicted RBP	11.26	□□□□□ -0.61
LINC00461-208	ENST00000508885	SOS1	Q07889	1333 aa	Predicted RBP	11.26	□□□□□ -0.61
LINC00461-208	ENST00000508885	ZNF831	Q5JPB2	1677 aa		11.26	□□□□□ -0.61
LINC00461-208	ENST00000508885	KIAA1551	Q9HCM1	1747 aa		11.26	□□□□□ -0.61
LINC00461-208	ENST00000508885	CANX	P27824	592 aa	Known RBP	11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	RASSF7	Q02833	373 aa		11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	FSTL1	Q12841	308 aa		11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	CNGB1	Q14028	1251 aa	Predicted RBP	11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	NARF	Q9UHQ1	456 aa		11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	ZBTB1	Q9Y2K1	713 aa		11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	COL5A3	P25940	1745 aa	Predicted RBP	11.25	□□□□□ -0.61
LINC00461-208	ENST00000508885	SERPINB2	P05120	415 aa		11.24	□□□□□ -0.61
LINC00461-208	ENST00000508885	MTHFSD	Q2M296	383 aa	Known RBP	11.24	□□□□□ -0.61
LINC00461-208	ENST00000508885	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.24	□□□□□ -0.61
LINC00461-208	ENST00000508885	BICDL1	Q6ZP65	573 aa		11.24	□□□□□ -0.61
LINC00461-208	ENST00000508885	KCP	Q6ZWJ8	1503 aa		11.24	□□□□□ -0.61
LINC00461-208	ENST00000508885	DIAPH1	O60610	1272 aa	Known RBP	11.23	□□□□□ -0.61
LINC00461-208	ENST00000508885	CC2D1B	Q5T0F9	858 aa	Known RBP	11.23	□□□□□ -0.61
LINC00461-208	ENST00000508885	C2CD5	Q86YS7	1000 aa		11.23	□□□□□ -0.61
LINC00461-208	ENST00000508885	TTLL6	Q8N841	843 aa		11.23	□□□□□ -0.61
LINC00461-208	ENST00000508885	COL15A1	P39059	1388 aa		11.23	□□□□□ -0.61
LINC00461-208	ENST00000508885	STARD3NL	O95772	234 aa		11.22	□□□□□ -0.61
LINC00461-208	ENST00000508885	TTC5	Q8N0Z6	440 aa		11.22	□□□□□ -0.61
LINC00461-208	ENST00000508885	KLRG1	Q96E93	195 aa		11.22	□□□□□ -0.61
LINC00461-208	ENST00000508885	BCL2L12	Q9HB09	334 aa		11.22	□□□□□ -0.61
LINC00461-208	ENST00000508885	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.22	□□□□□ -0.61
LINC00461-208	ENST00000508885		H0YIN7	160 aa		11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	U2SURP	O15042	1029 aa	Known RBP	11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	LMNB1	P20700	586 aa		11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	POTEH	Q6S545	545 aa		11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	VSIG10	Q8N0Z9	540 aa		11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	SMC1B	Q8NDV3	1235 aa		11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.21	□□□□□ -0.61
LINC00461-208	ENST00000508885	TJP1	Q07157	1748 aa		11.21	□□□□□ -0.62
LINC00461-208	ENST00000508885	KIF7	Q2M1P5	1343 aa		11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885		A0A087WZG4	1122 aa		11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885	GLTPD2	A6NH11	291 aa		11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885	VEGFA	P15692	232 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885	TEF	Q10587	303 aa		11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885	BRCA1	P38398	1863 aa	Known RBP	11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885	ARFGEF1	Q9Y6D6	1849 aa		11.2	□□□□□ -0.62
LINC00461-208	ENST00000508885	SCN11A	Q9UI33	1791 aa		11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	NPHP1	O15259	732 aa		11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	PRELP	P51888	382 aa		11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	EIF5	P55010	431 aa	Known RBP	11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	TBC1D9B	Q66K14	1250 aa		11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	NPM2	Q86SE8	214 aa	Known RBP	11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	CCDC24	Q8N4L8	307 aa		11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	TBC1D2B	Q9UPU7	963 aa		11.19	□□□□□ -0.62
LINC00461-208	ENST00000508885	IL17RE	Q8NFR9	667 aa		11.18	□□□□□ -0.62
LINC00461-208	ENST00000508885	ZNF496	Q96IT1	587 aa	Predicted RBP	11.18	□□□□□ -0.62
LINC00461-208	ENST00000508885	CARMIL3	Q8ND23	1372 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	GNAT3	A8MTJ3	354 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	NFKBIE	O00221	500 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	PER1	O15534	1290 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	C21orf2	O43822	256 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	NPM3	O75607	178 aa	Known RBP	11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	A1BG	P04217	495 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	PDE6B	P35913	854 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	DPY19L2	Q6NUT2	758 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	ZNF790	Q6PG37	636 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	JMY	Q8N9B5	988 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	GAS2L2	Q8NHY3	880 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	MRC1	P22897	1456 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	ADAMTS7	Q9UKP4	1686 aa		11.17	□□□□□ -0.62
LINC00461-208	ENST00000508885	ERFE	Q4G0M1	354 aa		11.16	□□□□□ -0.62
LINC00461-208	ENST00000508885	SETDB2	Q96T68	719 aa		11.16	□□□□□ -0.62
LINC00461-208	ENST00000508885	BRIP1	Q9BX63	1249 aa		11.16	□□□□□ -0.62
LINC00461-208	ENST00000508885	HEG1	Q9ULI3	1381 aa		11.16	□□□□□ -0.62
LINC00461-208	ENST00000508885	SBF1	O95248	1867 aa		11.15	□□□□□ -0.62
LINC00461-208	ENST00000508885	CAPN15	O75808	1086 aa		11.15	□□□□□ -0.62
LINC00461-208	ENST00000508885	PRR5L	Q6MZQ0	368 aa		11.15	□□□□□ -0.62
LINC00461-208	ENST00000508885	FMNL2	Q96PY5	1086 aa		11.15	□□□□□ -0.62
LINC00461-208	ENST00000508885	PDZRN3	Q9UPQ7	1066 aa		11.15	□□□□□ -0.62
LINC00461-208	ENST00000508885	WDR90	Q96KV7	1748 aa		11.15	□□□□□ -0.63
LINC00461-208	ENST00000508885	AFDN	P55196	1824 aa	Known RBP	11.14	□□□□□ -0.63
LINC00461-208	ENST00000508885	BTBD11	A6QL63	1104 aa		11.14	□□□□□ -0.63
LINC00461-208	ENST00000508885	KCNQ3	O43525	872 aa		11.14	□□□□□ -0.63
LINC00461-208	ENST00000508885	IL6ST	P40189	918 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00461-208	ENST00000508885	CNBD1	Q8NA66	436 aa		11.14	□□□□□ -0.63
LINC00461-208	ENST00000508885	POTEC	B2RU33	542 aa		11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	CAMTA2	O94983	1202 aa		11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	PIP4K2A	P48426	406 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	ST5	P78524	1137 aa		11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	DZIP3	Q86Y13	1208 aa	Known RBP	11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	TNS4	Q8IZW8	715 aa		11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	CNKSR1	Q969H4	720 aa		11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	USP16	Q9Y5T5	823 aa		11.13	□□□□□ -0.63
LINC00461-208	ENST00000508885	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.12	□□□□□ -0.63
LINC00461-208	ENST00000508885	HSPA1A	P0DMV8	641 aa	Known RBP	11.12	□□□□□ -0.63
LINC00461-208	ENST00000508885	HSPA1B	P0DMV9	641 aa	Known RBP	11.12	□□□□□ -0.63
LINC00461-208	ENST00000508885	PRKAR2B	P31323	418 aa		11.12	□□□□□ -0.63
LINC00461-208	ENST00000508885	PHACTR3	Q96KR7	559 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms